RNA–Protein interactions for RNA: ENST00000299335.7

COX11-201, Transcript of cytochrome c oxidase copper chaperone COX11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX11, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX11-201ENST00000299335 NISCHQ9Y2I1 1504 aa31.73■■■□□ 2.67
COX11-201ENST00000299335 SHROOM4Q9ULL8 1493 aa27.27■■□□□ 1.96
COX11-201ENST00000299335 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
COX11-201ENST00000299335 SUPT5HO00267 1087 aaKnown RBP26.85■■□□□ 1.89
COX11-201ENST00000299335 CCDC180Q9P1Z9 1646 aa26.79■■□□□ 1.88
COX11-201ENST00000299335 DCAF8L2P0C7V8 631 aa26.34■■□□□ 1.81
COX11-201ENST00000299335 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
COX11-201ENST00000299335 MYO15BQ96JP2 1530 aa26.13■■□□□ 1.77
COX11-201ENST00000299335 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
COX11-201ENST00000299335 HRCP23327 699 aa25.73■■□□□ 1.71
COX11-201ENST00000299335 PCGF6Q9BYE7 350 aa25.61■■□□□ 1.69
COX11-201ENST00000299335 LOC105371045A0A1W2PR82 267 aa25.47■■□□□ 1.67
COX11-201ENST00000299335 ABCC9O60706 1549 aa25.36■■□□□ 1.65
COX11-201ENST00000299335 RSF1Q96T23 1441 aaPredicted RBP25.23■■□□□ 1.63
COX11-201ENST00000299335 SCRIBQ14160 1630 aa25.21■■□□□ 1.63
COX11-201ENST00000299335 PPARGC1BQ86YN6 1023 aaKnown RBP25.2■■□□□ 1.62
COX11-201ENST00000299335 TRIM26Q12899 539 aaPredicted RBP25.05■■□□□ 1.6
COX11-201ENST00000299335 TRIM41Q8WV44 630 aa24.98■■□□□ 1.59
COX11-201ENST00000299335 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
COX11-201ENST00000299335 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
COX11-201ENST00000299335 CECR2Q9BXF3 1484 aa24.79■■□□□ 1.56
COX11-201ENST00000299335 NACADO15069 1562 aa24.77■■□□□ 1.56
COX11-201ENST00000299335 MROH2BQ7Z745 1585 aa24.7■■□□□ 1.54
COX11-201ENST00000299335 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
COX11-201ENST00000299335 ZEB1P37275 1124 aaPredicted RBP24.56■■□□□ 1.52
COX11-201ENST00000299335 WIZO95785 1651 aa24.56■■□□□ 1.52
COX11-201ENST00000299335 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
COX11-201ENST00000299335 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
COX11-201ENST00000299335 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
COX11-201ENST00000299335 CCDC88BA6NC98 1476 aa24.11■■□□□ 1.45
COX11-201ENST00000299335 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
COX11-201ENST00000299335 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
COX11-201ENST00000299335 SMARCA2P51531 1590 aa24.04■■□□□ 1.44
COX11-201ENST00000299335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.04■■□□□ 1.44
COX11-201ENST00000299335 CCER1Q8TC90 406 aaPredicted RBP23.96■■□□□ 1.43
COX11-201ENST00000299335 SOGA1O94964 1423 aa23.95■■□□□ 1.43
COX11-201ENST00000299335 UNC13AQ9UPW8 1703 aa23.94■■□□□ 1.42
COX11-201ENST00000299335 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
COX11-201ENST00000299335 CEP162Q5TB80 1403 aa23.91■■□□□ 1.42
COX11-201ENST00000299335 TNIKQ9UKE5 1360 aa23.87■■□□□ 1.41
COX11-201ENST00000299335 TTBK1Q5TCY1 1321 aaPredicted RBP23.86■■□□□ 1.41
COX11-201ENST00000299335 CSRNP3Q8WYN3 585 aa23.84■■□□□ 1.41
COX11-201ENST00000299335 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
COX11-201ENST00000299335 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
COX11-201ENST00000299335 EEA1Q15075 1411 aa23.8■■□□□ 1.4
COX11-201ENST00000299335 PABPN1Q86U42 306 aaKnown RBP eCLIP23.78■■□□□ 1.4
COX11-201ENST00000299335 UBTFP17480 764 aaKnown RBP23.77■■□□□ 1.4
COX11-201ENST00000299335 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
COX11-201ENST00000299335 GOLGA3Q08378 1498 aa23.66■■□□□ 1.38
COX11-201ENST00000299335 PEG3Q9GZU2 1588 aa23.62■■□□□ 1.37
COX11-201ENST00000299335 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
COX11-201ENST00000299335 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
COX11-201ENST00000299335 SYNJ1O43426 1573 aa23.53■■□□□ 1.36
COX11-201ENST00000299335 NEUROD1Q13562 356 aa23.51■■□□□ 1.35
COX11-201ENST00000299335 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
COX11-201ENST00000299335 PELP1Q8IZL8 1130 aaKnown RBP23.49■■□□□ 1.35
COX11-201ENST00000299335 ATAD2BQ9ULI0 1458 aa23.47■■□□□ 1.35
COX11-201ENST00000299335 KIF21BO75037 1637 aa23.44■■□□□ 1.34
COX11-201ENST00000299335 CLIP1P30622 1438 aa23.42■■□□□ 1.34
COX11-201ENST00000299335 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
COX11-201ENST00000299335 ZNF316A6NFI3 1004 aaPredicted RBP23.38■■□□□ 1.33
COX11-201ENST00000299335 HNRNPUL2Q1KMD3 747 aaKnown RBP23.37■■□□□ 1.33
COX11-201ENST00000299335 RAPGEF2Q9Y4G8 1499 aa23.34■■□□□ 1.33
COX11-201ENST00000299335 CENPBP07199 599 aaPredicted RBP23.34■■□□□ 1.33
COX11-201ENST00000299335 VPS8Q8N3P4 1428 aa23.34■■□□□ 1.33
COX11-201ENST00000299335 GTF3C3Q9Y5Q9 886 aa23.28■■□□□ 1.32
COX11-201ENST00000299335 RANGAP1P46060 587 aaPredicted RBP23.26■■□□□ 1.31
COX11-201ENST00000299335 APLP2Q06481 763 aa23.26■■□□□ 1.31
COX11-201ENST00000299335 TOP2BQ02880 1626 aa23.2■■□□□ 1.31
COX11-201ENST00000299335 MIER1Q8N108 512 aa23.09■■□□□ 1.29
COX11-201ENST00000299335 BIVM-ERCC5R4GMW8 1640 aa23.09■■□□□ 1.29
COX11-201ENST00000299335 PRXQ9BXM0 1461 aa23.08■■□□□ 1.29
COX11-201ENST00000299335 YTHDC1Q96MU7 727 aaKnown RBP23.06■■□□□ 1.28
COX11-201ENST00000299335 ERICH3Q5RHP9 1530 aa23.04■■□□□ 1.28
COX11-201ENST00000299335 ARAP1Q96P48 1450 aa23.01■■□□□ 1.27
COX11-201ENST00000299335 KANK4Q5T7N3 995 aaPredicted RBP22.99■■□□□ 1.27
COX11-201ENST00000299335 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
COX11-201ENST00000299335 CUX1P39880 1505 aa22.97■■□□□ 1.27
COX11-201ENST00000299335 HMGXB3Q12766 1538 aa22.93■■□□□ 1.26
COX11-201ENST00000299335 DHX57Q6P158 1386 aaKnown RBP22.93■■□□□ 1.26
COX11-201ENST00000299335 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
COX11-201ENST00000299335 CLSPNQ9HAW4 1339 aa22.92■■□□□ 1.26
COX11-201ENST00000299335 CFTRP13569 1480 aa22.85■■□□□ 1.25
COX11-201ENST00000299335 RRBP1Q9P2E9 1410 aaKnown RBP22.83■■□□□ 1.25
COX11-201ENST00000299335 ARHGAP35Q9NRY4 1499 aa22.79■■□□□ 1.24
COX11-201ENST00000299335 CCNB3Q8WWL7 1395 aa22.74■■□□□ 1.23
COX11-201ENST00000299335 CUX2O14529 1486 aa22.71■■□□□ 1.23
COX11-201ENST00000299335 IGF1RP08069 1367 aa22.69■■□□□ 1.22
COX11-201ENST00000299335 ITGAEP38570 1179 aa22.68■■□□□ 1.22
COX11-201ENST00000299335 CARMIL1Q5VZK9 1371 aa22.59■■□□□ 1.21
COX11-201ENST00000299335 RAB3GAP2Q9H2M9 1393 aa22.57■■□□□ 1.2
COX11-201ENST00000299335 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
COX11-201ENST00000299335 TIAM1Q13009 1591 aa22.54■■□□□ 1.2
COX11-201ENST00000299335 PRDM2Q13029 1718 aa22.54■■□□□ 1.2
COX11-201ENST00000299335 MAP3K1Q13233 1512 aa22.53■■□□□ 1.2
COX11-201ENST00000299335 FGD5Q6ZNL6 1462 aa22.53■■□□□ 1.2
COX11-201ENST00000299335 LRRC9Q6ZRR7 1453 aa22.49■■□□□ 1.19
COX11-201ENST00000299335 MAPKBP1O60336 1514 aa22.49■■□□□ 1.19
COX11-201ENST00000299335 PHLDB1Q86UU1 1377 aa22.48■■□□□ 1.19
COX11-201ENST00000299335 SETD5Q9C0A6 1442 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms