RNA–Protein interactions for RNA: ENST00000584130.1

RIOK3-209, Transcript of RIO kinase 3, humanhuman

TSL 4

Gene RIOK3, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-209ENST00000584130 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
RIOK3-209ENST00000584130 CHIC1Q5VXU3 224 aa26.2■■□□□ 1.78
RIOK3-209ENST00000584130 SENP3Q9H4L4 574 aaPredicted RBP23.29■■□□□ 1.32
RIOK3-209ENST00000584130 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
RIOK3-209ENST00000584130 FOXD1Q16676 465 aa21.63■■□□□ 1.05
RIOK3-209ENST00000584130 PLPPR3Q6T4P5 718 aa21.06■□□□□ 0.96
RIOK3-209ENST00000584130 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
RIOK3-209ENST00000584130 ADRA2BP18089 450 aa20.36■□□□□ 0.85
RIOK3-209ENST00000584130 PIAS4Q8N2W9 510 aaPredicted RBP20.31■□□□□ 0.84
RIOK3-209ENST00000584130 MSH5O43196 834 aa20.18■□□□□ 0.82
RIOK3-209ENST00000584130 POTEDQ86YR6 584 aa19.22■□□□□ 0.67
RIOK3-209ENST00000584130 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
RIOK3-209ENST00000584130 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
RIOK3-209ENST00000584130 DMRT2Q9Y5R5 561 aa18.5■□□□□ 0.55
RIOK3-209ENST00000584130 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
RIOK3-209ENST00000584130 CNKSR2Q8WXI2 1034 aa18.08■□□□□ 0.48
RIOK3-209ENST00000584130 HOXD11P31277 338 aaPredicted RBP17.92■□□□□ 0.46
RIOK3-209ENST00000584130 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
RIOK3-209ENST00000584130 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
RIOK3-209ENST00000584130 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
RIOK3-209ENST00000584130 NPM3O75607 178 aaKnown RBP17.6■□□□□ 0.41
RIOK3-209ENST00000584130 KCNA4P22459 653 aa17.49■□□□□ 0.39
RIOK3-209ENST00000584130 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
RIOK3-209ENST00000584130 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
RIOK3-209ENST00000584130 CACNB1Q02641 598 aaPredicted RBP17.12■□□□□ 0.33
RIOK3-209ENST00000584130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.323e-9■□□□□ 9.6
RIOK3-209ENST00000584130 C1QBPQ07021 282 aaKnown RBP17■□□□□ 0.31
RIOK3-209ENST00000584130 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
RIOK3-209ENST00000584130 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
RIOK3-209ENST00000584130 SLC4A1APQ9BWU0 796 aaKnown RBP16.58■□□□□ 0.24
RIOK3-209ENST00000584130 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
RIOK3-209ENST00000584130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.38■□□□□ 0.21
RIOK3-209ENST00000584130 HNRNPUL2Q1KMD3 747 aaKnown RBP16.38■□□□□ 0.21
RIOK3-209ENST00000584130 CAPN15O75808 1086 aa16.37■□□□□ 0.21
RIOK3-209ENST00000584130 APLP2Q06481 763 aa16.34■□□□□ 0.21
RIOK3-209ENST00000584130 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
RIOK3-209ENST00000584130 SAMD1Q6SPF0 538 aaPredicted RBP16.3■□□□□ 0.2
RIOK3-209ENST00000584130 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
RIOK3-209ENST00000584130 DSG3P32926 999 aa16.21■□□□□ 0.19
RIOK3-209ENST00000584130 ZNF219Q9P2Y4 722 aaPredicted RBP16.19■□□□□ 0.18
RIOK3-209ENST00000584130 TRHP20396 242 aaPredicted RBP16.16■□□□□ 0.18
RIOK3-209ENST00000584130 ZBTB22O15209 634 aa16.1■□□□□ 0.17
RIOK3-209ENST00000584130 ABCB7O75027 752 aa16.02■□□□□ 0.16
RIOK3-209ENST00000584130 ATF5Q9Y2D1 282 aaPredicted RBP15.85■□□□□ 0.13
RIOK3-209ENST00000584130 POLA2Q14181 598 aa15.78■□□□□ 0.12
RIOK3-209ENST00000584130 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
RIOK3-209ENST00000584130 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
RIOK3-209ENST00000584130 ZBTB12Q9Y330 459 aaPredicted RBP15.55■□□□□ 0.08
RIOK3-209ENST00000584130 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
RIOK3-209ENST00000584130 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
RIOK3-209ENST00000584130 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
RIOK3-209ENST00000584130 FBLN2P98095 1184 aa15.26■□□□□ 0.03
RIOK3-209ENST00000584130 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
RIOK3-209ENST00000584130 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
RIOK3-209ENST00000584130 POTEHQ6S545 545 aa15.12■□□□□ 0.01
RIOK3-209ENST00000584130 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
RIOK3-209ENST00000584130 SPDYE6P0CI01 402 aa15.07■□□□□ 0
RIOK3-209ENST00000584130 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
RIOK3-209ENST00000584130 CHRDL2Q6WN34 429 aa15.03■□□□□ -0
RIOK3-209ENST00000584130 REM2Q8IYK8 340 aaPredicted RBP15.02■□□□□ -0
RIOK3-209ENST00000584130 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
RIOK3-209ENST00000584130 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
RIOK3-209ENST00000584130 PITPNM1O00562 1244 aa14.88□□□□□ -0.03
RIOK3-209ENST00000584130 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
RIOK3-209ENST00000584130 PIP4P2Q8N4L2 257 aa14.73□□□□□ -0.05
RIOK3-209ENST00000584130 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
RIOK3-209ENST00000584130 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.06
RIOK3-209ENST00000584130 CLEC11AQ9Y240 323 aa14.66□□□□□ -0.06
RIOK3-209ENST00000584130 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
RIOK3-209ENST00000584130 PRKAR2AP13861 404 aaKnown RBP14.48□□□□□ -0.09
RIOK3-209ENST00000584130 PRR29P0C7W0 189 aa14.46□□□□□ -0.09
RIOK3-209ENST00000584130 HAX1O00165 279 aa14.36□□□□□ -0.11
RIOK3-209ENST00000584130 CHADLQ6NUI6 762 aa14.36□□□□□ -0.11
RIOK3-209ENST00000584130 STAG3Q9UJ98 1225 aa14.36□□□□□ -0.11
RIOK3-209ENST00000584130 SP7Q8TDD2 431 aaPredicted RBP14.31□□□□□ -0.12
RIOK3-209ENST00000584130 PROM2Q8N271 834 aa14.3□□□□□ -0.12
RIOK3-209ENST00000584130 C19orf67A6NJJ6 358 aa14.21□□□□□ -0.13
RIOK3-209ENST00000584130 EVX2Q03828 476 aa14.19□□□□□ -0.14
RIOK3-209ENST00000584130 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
RIOK3-209ENST00000584130 CREBZFQ9NS37 354 aa14.18□□□□□ -0.14
RIOK3-209ENST00000584130 FKBP8Q14318 412 aa14.12□□□□□ -0.15
RIOK3-209ENST00000584130 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
RIOK3-209ENST00000584130 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
RIOK3-209ENST00000584130 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
RIOK3-209ENST00000584130 GABBR2O75899 941 aa13.9□□□□□ -0.18
RIOK3-209ENST00000584130 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
RIOK3-209ENST00000584130 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
RIOK3-209ENST00000584130 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
RIOK3-209ENST00000584130 PLEKHG5O94827 1062 aa13.85□□□□□ -0.19
RIOK3-209ENST00000584130 MIER1Q8N108 512 aa13.84□□□□□ -0.19
RIOK3-209ENST00000584130 CLCN6P51797 869 aa13.81□□□□□ -0.2
RIOK3-209ENST00000584130 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
RIOK3-209ENST00000584130 FBXO3Q9UK99 471 aa13.77□□□□□ -0.21
RIOK3-209ENST00000584130 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
RIOK3-209ENST00000584130 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
RIOK3-209ENST00000584130 TSPYL2Q9H2G4 693 aaPredicted RBP13.67□□□□□ -0.22
RIOK3-209ENST00000584130 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
RIOK3-209ENST00000584130 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
RIOK3-209ENST00000584130 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
RIOK3-209ENST00000584130 POTEIP0CG38 1075 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms