RNA–Protein interactions for RNA: ENST00000414301.5

SEMA3F-203, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-203ENST00000414301 NISCHQ9Y2I1 1504 aa39.6■■■■□ 3.93
SEMA3F-203ENST00000414301 ABCC9O60706 1549 aa35.31■■■■□ 3.24
SEMA3F-203ENST00000414301 CCDC180Q9P1Z9 1646 aa35.29■■■■□ 3.24
SEMA3F-203ENST00000414301 DCAF8L2P0C7V8 631 aa33.63■■■□□ 2.97
SEMA3F-203ENST00000414301 RB1CC1Q8TDY2 1594 aa33.62■■■□□ 2.97
SEMA3F-203ENST00000414301 NACADO15069 1562 aa33.44■■■□□ 2.94
SEMA3F-203ENST00000414301 DNAJC5BQ9UF47 199 aa33.05■■■□□ 2.88
SEMA3F-203ENST00000414301 MYO15BQ96JP2 1530 aa33.03■■■□□ 2.88
SEMA3F-203ENST00000414301 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.88
SEMA3F-203ENST00000414301 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
SEMA3F-203ENST00000414301 DCAF1Q9Y4B6 1507 aa32.67■■■□□ 2.82
SEMA3F-203ENST00000414301 UNC13AQ9UPW8 1703 aa32.67■■■□□ 2.82
SEMA3F-203ENST00000414301 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
SEMA3F-203ENST00000414301 SCRIBQ14160 1630 aa32.26■■■□□ 2.75
SEMA3F-203ENST00000414301 SHROOM4Q9ULL8 1493 aa32.17■■■□□ 2.74
SEMA3F-203ENST00000414301 CC2D2AQ9P2K1 1620 aa31.82■■■□□ 2.68
SEMA3F-203ENST00000414301 EIF4G1Q04637 1599 aaKnown RBP31.8■■■□□ 2.68
SEMA3F-203ENST00000414301 CECR2Q9BXF3 1484 aa31.78■■■□□ 2.68
SEMA3F-203ENST00000414301 NCAPD3P42695 1498 aa30.94■■■□□ 2.54
SEMA3F-203ENST00000414301 ATAD2BQ9ULI0 1458 aa30.86■■■□□ 2.53
SEMA3F-203ENST00000414301 SMARCA4P51532 1647 aa30.77■■■□□ 2.52
SEMA3F-203ENST00000414301 SMARCA2P51531 1590 aa30.74■■■□□ 2.51
SEMA3F-203ENST00000414301 BAZ1AQ9NRL2 1556 aaPredicted RBP30.71■■■□□ 2.51
SEMA3F-203ENST00000414301 HMGXB3Q12766 1538 aa30.62■■■□□ 2.49
SEMA3F-203ENST00000414301 BAZ1BQ9UIG0 1483 aaKnown RBP30.56■■■□□ 2.48
SEMA3F-203ENST00000414301 MROH2BQ7Z745 1585 aa30.51■■■□□ 2.47
SEMA3F-203ENST00000414301 ERCC6Q03468 1493 aa30.49■■■□□ 2.47
SEMA3F-203ENST00000414301 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
SEMA3F-203ENST00000414301 NESP48681 1621 aa30.36■■■□□ 2.45
SEMA3F-203ENST00000414301 CUX2O14529 1486 aa30.31■■■□□ 2.44
SEMA3F-203ENST00000414301 DNAJC5Q9H3Z4 198 aa30.23■■■□□ 2.43
SEMA3F-203ENST00000414301 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
SEMA3F-203ENST00000414301 WIZO95785 1651 aa30.1■■■□□ 2.41
SEMA3F-203ENST00000414301 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
SEMA3F-203ENST00000414301 CADPSQ9ULU8 1353 aa30.06■■■□□ 2.4
SEMA3F-203ENST00000414301 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.39
SEMA3F-203ENST00000414301 THOC2Q8NI27 1593 aaKnown RBP29.87■■■□□ 2.37
SEMA3F-203ENST00000414301 KIF21AQ7Z4S6 1674 aa29.82■■■□□ 2.36
SEMA3F-203ENST00000414301 TOP2AP11388 1531 aaKnown RBP29.74■■■□□ 2.35
SEMA3F-203ENST00000414301 MRC2Q9UBG0 1479 aa29.72■■■□□ 2.35
SEMA3F-203ENST00000414301 CFTRP13569 1480 aa29.69■■■□□ 2.34
SEMA3F-203ENST00000414301 FANCD2Q9BXW9 1451 aa29.66■■■□□ 2.34
SEMA3F-203ENST00000414301 CEP164Q9UPV0 1460 aa29.65■■■□□ 2.34
SEMA3F-203ENST00000414301 WDR62O43379 1518 aa29.57■■■□□ 2.32
SEMA3F-203ENST00000414301 CCDC88BA6NC98 1476 aa29.5■■■□□ 2.31
SEMA3F-203ENST00000414301 URB2Q14146 1524 aaKnown RBP29.35■■■□□ 2.29
SEMA3F-203ENST00000414301 PRDM2Q13029 1718 aa29.15■■■□□ 2.26
SEMA3F-203ENST00000414301 OSCARQ8IYS5 282 aa29.15■■■□□ 2.26
SEMA3F-203ENST00000414301 TOPBP1Q92547 1522 aa29.09■■■□□ 2.25
SEMA3F-203ENST00000414301 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
SEMA3F-203ENST00000414301 IFT140Q96RY7 1462 aa29.07■■■□□ 2.24
SEMA3F-203ENST00000414301 TRIM41Q8WV44 630 aa29.02■■■□□ 2.24
SEMA3F-203ENST00000414301 SUPT5HO00267 1087 aaKnown RBP29■■■□□ 2.23
SEMA3F-203ENST00000414301 ZNF608Q9ULD9 1512 aaPredicted RBP28.99■■■□□ 2.23
SEMA3F-203ENST00000414301 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
SEMA3F-203ENST00000414301 AQRO60306 1485 aaKnown RBP eCLIP28.82■■■□□ 2.2
SEMA3F-203ENST00000414301 POLA1P09884 1462 aaPredicted RBP28.8■■■□□ 2.2
SEMA3F-203ENST00000414301 SOGA1O94964 1423 aa28.78■■■□□ 2.2
SEMA3F-203ENST00000414301 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
SEMA3F-203ENST00000414301 TARBP1Q13395 1621 aaKnown RBP28.74■■■□□ 2.19
SEMA3F-203ENST00000414301 EIF4G3O43432 1585 aaKnown RBP28.72■■■□□ 2.19
SEMA3F-203ENST00000414301 FBLN2P98095 1184 aa28.72■■■□□ 2.19
SEMA3F-203ENST00000414301 TDRD9Q8NDG6 1382 aaKnown RBP28.71■■■□□ 2.19
SEMA3F-203ENST00000414301 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
SEMA3F-203ENST00000414301 CUX1P39880 1505 aa28.64■■■□□ 2.18
SEMA3F-203ENST00000414301 CHMP7Q8WUX9 453 aaPredicted RBP28.52■■■□□ 2.16
SEMA3F-203ENST00000414301 RIMBP3CA6NJZ7 1639 aa28.5■■■□□ 2.15
SEMA3F-203ENST00000414301 RIMBP3BA6NNM3 1639 aa28.5■■■□□ 2.15
SEMA3F-203ENST00000414301 RIMBP3Q9UFD9 1639 aa28.5■■■□□ 2.15
SEMA3F-203ENST00000414301 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
SEMA3F-203ENST00000414301 CYB5RLQ6IPT4 315 aa28.46■■■□□ 2.15
SEMA3F-203ENST00000414301 SNAPC4Q5SXM2 1469 aa28.46■■■□□ 2.15
SEMA3F-203ENST00000414301 GRIN2BQ13224 1484 aa28.45■■■□□ 2.14
SEMA3F-203ENST00000414301 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
SEMA3F-203ENST00000414301 CHD1O14646 1710 aa28.44■■■□□ 2.14
SEMA3F-203ENST00000414301 MAGI1Q96QZ7 1491 aaPredicted RBP28.39■■■□□ 2.13
SEMA3F-203ENST00000414301 GAPVD1Q14C86 1478 aa28.38■■■□□ 2.13
SEMA3F-203ENST00000414301 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
SEMA3F-203ENST00000414301 ABCA10Q8WWZ4 1543 aa28.34■■■□□ 2.13
SEMA3F-203ENST00000414301 SYNJ2O15056 1496 aa28.31■■■□□ 2.12
SEMA3F-203ENST00000414301 SYNJ1O43426 1573 aa28.23■■■□□ 2.11
SEMA3F-203ENST00000414301 ARAP1Q96P48 1450 aa28.21■■■□□ 2.11
SEMA3F-203ENST00000414301 TOP2BQ02880 1626 aa28.2■■■□□ 2.1
SEMA3F-203ENST00000414301 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
SEMA3F-203ENST00000414301 ABCA5Q8WWZ7 1642 aa28.18■■■□□ 2.1
SEMA3F-203ENST00000414301 PBRM1Q86U86 1689 aa28.16■■■□□ 2.1
SEMA3F-203ENST00000414301 BIVM-ERCC5R4GMW8 1640 aa28.14■■■□□ 2.09
SEMA3F-203ENST00000414301 TRHP20396 242 aaPredicted RBP28.11■■■□□ 2.09
SEMA3F-203ENST00000414301 GRIN2AQ12879 1464 aa28.04■■■□□ 2.08
SEMA3F-203ENST00000414301 FHAD1B1AJZ9 1412 aa28.03■■■□□ 2.08
SEMA3F-203ENST00000414301 ERICH3Q5RHP9 1530 aa27.97■■■□□ 2.07
SEMA3F-203ENST00000414301 ADAMTS12P58397 1594 aa27.96■■■□□ 2.07
SEMA3F-203ENST00000414301 NUP160Q12769 1436 aa27.94■■■□□ 2.06
SEMA3F-203ENST00000414301 CEP170Q5SW79 1584 aa27.87■■■□□ 2.05
SEMA3F-203ENST00000414301 JPH4Q96JJ6 628 aa27.83■■■□□ 2.05
SEMA3F-203ENST00000414301 IGF1RP08069 1367 aa27.8■■■□□ 2.04
SEMA3F-203ENST00000414301 ERCC6L2Q5T890 1561 aa27.79■■■□□ 2.04
SEMA3F-203ENST00000414301 KIF27Q86VH2 1401 aa27.79■■■□□ 2.04
SEMA3F-203ENST00000414301 PRG4Q92954 1404 aaPredicted RBP27.74■■■□□ 2.03
SEMA3F-203ENST00000414301 SHROOM2Q13796 1616 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms