RNA–Protein interactions for RNA: ENST00000557648.1

MLH3-213, Transcript of mutL homolog 3, humanhuman

TSL 3

Gene MLH3, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-213ENST00000557648 NISCHQ9Y2I1 1504 aa16.65■□□□□ 0.26
MLH3-213ENST00000557648 AEBP2Q6ZN18 517 aaPredicted RBP16.16■□□□□ 0.18
MLH3-213ENST00000557648 CHIC1Q5VXU3 224 aa15.26■□□□□ 0.03
MLH3-213ENST00000557648 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
MLH3-213ENST00000557648 ABCC9O60706 1549 aa14.83□□□□□ -0.04
MLH3-213ENST00000557648 RB1CC1Q8TDY2 1594 aa14.1□□□□□ -0.15
MLH3-213ENST00000557648 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
MLH3-213ENST00000557648 NACADO15069 1562 aa14□□□□□ -0.17
MLH3-213ENST00000557648 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
MLH3-213ENST00000557648 ZCCHC6Q5VYS8 1495 aaKnown RBP13.86□□□□□ -0.19
MLH3-213ENST00000557648 BICRAQ9NZM4 1560 aa13.82□□□□□ -0.2
MLH3-213ENST00000557648 DNAJC5BQ9UF47 199 aa13.79□□□□□ -0.2
MLH3-213ENST00000557648 MYO15BQ96JP2 1530 aa13.78□□□□□ -0.2
MLH3-213ENST00000557648 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
MLH3-213ENST00000557648 SCRIBQ14160 1630 aa13.71□□□□□ -0.22
MLH3-213ENST00000557648 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
MLH3-213ENST00000557648 SENP3Q9H4L4 574 aaPredicted RBP13.67□□□□□ -0.22
MLH3-213ENST00000557648 PHF23Q9BUL5 403 aaPredicted RBP13.56□□□□□ -0.24
MLH3-213ENST00000557648 CC2D2AQ9P2K1 1620 aa13.44□□□□□ -0.26
MLH3-213ENST00000557648 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
MLH3-213ENST00000557648 SHROOM4Q9ULL8 1493 aa13.39□□□□□ -0.27
MLH3-213ENST00000557648 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
MLH3-213ENST00000557648 SMARCA4P51532 1647 aa13.05□□□□□ -0.32
MLH3-213ENST00000557648 ATAD2BQ9ULI0 1458 aa12.93□□□□□ -0.34
MLH3-213ENST00000557648 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.34
MLH3-213ENST00000557648 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.35
MLH3-213ENST00000557648 NCAPD3P42695 1498 aa12.89□□□□□ -0.35
MLH3-213ENST00000557648 HMGXB3Q12766 1538 aa12.88□□□□□ -0.35
MLH3-213ENST00000557648 SMARCA2P51531 1590 aa12.87□□□□□ -0.35
MLH3-213ENST00000557648 PEG3Q9GZU2 1588 aa12.85□□□□□ -0.35
MLH3-213ENST00000557648 WIZO95785 1651 aa12.84□□□□□ -0.35
MLH3-213ENST00000557648 FOXD1Q16676 465 aa12.83□□□□□ -0.36
MLH3-213ENST00000557648 NESP48681 1621 aa12.82□□□□□ -0.36
MLH3-213ENST00000557648 BAZ1BQ9UIG0 1483 aaKnown RBP12.81□□□□□ -0.36
MLH3-213ENST00000557648 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.36
MLH3-213ENST00000557648 THOC2Q8NI27 1593 aaKnown RBP12.7□□□□□ -0.38
MLH3-213ENST00000557648 ERCC6Q03468 1493 aa12.69□□□□□ -0.38
MLH3-213ENST00000557648 LAMC3Q9Y6N6 1575 aa12.65□□□□□ -0.38
MLH3-213ENST00000557648 CUX2O14529 1486 aa12.61□□□□□ -0.39
MLH3-213ENST00000557648 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
MLH3-213ENST00000557648 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
MLH3-213ENST00000557648 PRDM2Q13029 1718 aa12.56□□□□□ -0.4
MLH3-213ENST00000557648 CADPSQ9ULU8 1353 aa12.49□□□□□ -0.41
MLH3-213ENST00000557648 WDR62O43379 1518 aa12.46□□□□□ -0.42
MLH3-213ENST00000557648 MRC2Q9UBG0 1479 aa12.45□□□□□ -0.42
MLH3-213ENST00000557648 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
MLH3-213ENST00000557648 FANCD2Q9BXW9 1451 aa12.42□□□□□ -0.42
MLH3-213ENST00000557648 DNAJC5Q9H3Z4 198 aa12.42□□□□□ -0.42
MLH3-213ENST00000557648 CFTRP13569 1480 aa12.41□□□□□ -0.42
MLH3-213ENST00000557648 CEP164Q9UPV0 1460 aa12.41□□□□□ -0.42
MLH3-213ENST00000557648 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
MLH3-213ENST00000557648 URB2Q14146 1524 aaKnown RBP12.38□□□□□ -0.43
MLH3-213ENST00000557648 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
MLH3-213ENST00000557648 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.45
MLH3-213ENST00000557648 EIF4G3O43432 1585 aaKnown RBP12.21□□□□□ -0.46
MLH3-213ENST00000557648 DNMBPQ6XZF7 1577 aa12.21□□□□□ -0.46
MLH3-213ENST00000557648 TARBP1Q13395 1621 aaKnown RBP12.19□□□□□ -0.46
MLH3-213ENST00000557648 CHD1O14646 1710 aa12.18□□□□□ -0.46
MLH3-213ENST00000557648 PLPPR3Q6T4P5 718 aa12.14□□□□□ -0.47
MLH3-213ENST00000557648 WDR97A6NE52 1622 aa12.13□□□□□ -0.47
MLH3-213ENST00000557648 IFT140Q96RY7 1462 aa12.12□□□□□ -0.47
MLH3-213ENST00000557648 CUX1P39880 1505 aa12.11□□□□□ -0.47
MLH3-213ENST00000557648 POLA1P09884 1462 aaPredicted RBP12.11□□□□□ -0.47
MLH3-213ENST00000557648 RAD54L2Q9Y4B4 1467 aa12.1□□□□□ -0.47
MLH3-213ENST00000557648 SUPT5HO00267 1087 aaKnown RBP12.1□□□□□ -0.47
MLH3-213ENST00000557648 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
MLH3-213ENST00000557648 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
MLH3-213ENST00000557648 AQRO60306 1485 aaKnown RBP eCLIP12.07□□□□□ -0.48
MLH3-213ENST00000557648 ABCC8Q09428 1581 aa12.06□□□□□ -0.48
MLH3-213ENST00000557648 RIMBP3CA6NJZ7 1639 aa12.06□□□□□ -0.48
MLH3-213ENST00000557648 RIMBP3BA6NNM3 1639 aa12.06□□□□□ -0.48
MLH3-213ENST00000557648 RIMBP3Q9UFD9 1639 aa12.06□□□□□ -0.48
MLH3-213ENST00000557648 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.49
MLH3-213ENST00000557648 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
MLH3-213ENST00000557648 SYNJ1O43426 1573 aa12□□□□□ -0.49
MLH3-213ENST00000557648 BIVM-ERCC5R4GMW8 1640 aa12□□□□□ -0.49
MLH3-213ENST00000557648 SOGA1O94964 1423 aa11.98□□□□□ -0.49
MLH3-213ENST00000557648 TDRD9Q8NDG6 1382 aaKnown RBP11.98□□□□□ -0.49
MLH3-213ENST00000557648 ABCA5Q8WWZ7 1642 aa11.97□□□□□ -0.49
MLH3-213ENST00000557648 ADRA2BP18089 450 aa11.97□□□□□ -0.49
MLH3-213ENST00000557648 SNAPC4Q5SXM2 1469 aa11.96□□□□□ -0.49
MLH3-213ENST00000557648 OSCARQ8IYS5 282 aa11.96□□□□□ -0.49
MLH3-213ENST00000557648 ARHGEF11O15085 1522 aa11.96□□□□□ -0.5
MLH3-213ENST00000557648 PIAS4Q8N2W9 510 aaPredicted RBP11.94□□□□□ -0.5
MLH3-213ENST00000557648 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
MLH3-213ENST00000557648 MSH5O43196 834 aa11.92□□□□□ -0.5
MLH3-213ENST00000557648 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
MLH3-213ENST00000557648 ABCA10Q8WWZ4 1543 aa11.89□□□□□ -0.51
MLH3-213ENST00000557648 FBLN2P98095 1184 aa11.87□□□□□ -0.51
MLH3-213ENST00000557648 GRIN2BQ13224 1484 aa11.87□□□□□ -0.51
MLH3-213ENST00000557648 ADAMTS12P58397 1594 aa11.87□□□□□ -0.51
MLH3-213ENST00000557648 GAPVD1Q14C86 1478 aa11.86□□□□□ -0.51
MLH3-213ENST00000557648 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
MLH3-213ENST00000557648 MAGI1Q96QZ7 1491 aaPredicted RBP11.85□□□□□ -0.51
MLH3-213ENST00000557648 WRNQ14191 1432 aaPredicted RBP eCLIP11.85□□□□□ -0.51
MLH3-213ENST00000557648 ERCC6L2Q5T890 1561 aa11.83□□□□□ -0.52
MLH3-213ENST00000557648 SYNJ2O15056 1496 aa11.83□□□□□ -0.52
MLH3-213ENST00000557648 CEP170Q5SW79 1584 aa11.82□□□□□ -0.52
MLH3-213ENST00000557648 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
MLH3-213ENST00000557648 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms