Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.69■■□□□ 1.862e-10■■□□□ 11.7
NKRFO15226 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.32■■□□□ 1.482e-10■■□□□ 11.7
NKRFO15226 H3F3B-203ENST00000586518 1701 nt32.74■■■□□ 2.833e-7■■□□□ 11.7
NKRFO15226 YY1-203ENST00000554371 636 ntTSL 328.54■■■□□ 2.163e-7■■□□□ 11.7
NKRFO15226 H3F3B-202ENST00000586270 468 ntTSL 228.53■■■□□ 2.163e-7■■□□□ 11.7
NKRFO15226 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.713e-7■■□□□ 11.7
NKRFO15226 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.313e-7■■□□□ 11.7
NKRFO15226 OSBPL10-205ENST00000452791 485 ntTSL 322.47■■□□□ 1.193e-7■■□□□ 11.7
NKRFO15226 BAIAP2-228ENST00000576756 748 ntTSL 221.4■■□□□ 1.023e-7■■□□□ 11.7
NKRFO15226 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.971e-12■■□□□ 11.7
NKRFO15226 H3F3B-209ENST00000589949 842 ntTSL 221■□□□□ 0.953e-7■■□□□ 11.7
NKRFO15226 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.954e-6■■□□□ 11.7
NKRFO15226 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.36■□□□□ 0.853e-7■■□□□ 11.7
NKRFO15226 H3F3B-207ENST00000589417 575 ntTSL 220.28■□□□□ 0.843e-7■■□□□ 11.7
NKRFO15226 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.822e-18■■□□□ 11.7
NKRFO15226 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.713e-7■■□□□ 11.7
NKRFO15226 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.691e-12■■□□□ 11.7
NKRFO15226 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.661e-12■■□□□ 11.7
NKRFO15226 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.59■□□□□ 0.574e-6■■□□□ 11.7
NKRFO15226 TRA2A-203ENST00000448549 582 ntTSL 418.2■□□□□ 0.51e-12■■□□□ 11.7
NKRFO15226 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.494e-6■■□□□ 11.7
NKRFO15226 TRA2A-208ENST00000490942 862 ntTSL 1 (best)18.08■□□□□ 0.481e-12■■□□□ 11.7
NKRFO15226 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.351e-12■■□□□ 11.7
NKRFO15226 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.223e-7■■□□□ 11.7
NKRFO15226 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.35■□□□□ 0.214e-6■■□□□ 11.7
NKRFO15226 CHID1-224ENST00000534254 1019 ntTSL 515.84■□□□□ 0.134e-6■■□□□ 11.7
NKRFO15226 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.053e-7■■□□□ 11.7
NKRFO15226 H3F3B-205ENST00000587171 586 ntTSL 215.33■□□□□ 0.043e-7■■□□□ 11.7
NKRFO15226 H3F3B-213ENST00000593254 894 ntTSL 515.33■□□□□ 0.043e-7■■□□□ 11.7
NKRFO15226 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.013e-7■■□□□ 11.7
NKRFO15226 CHID1-219ENST00000531859 834 ntTSL 515.03■□□□□ -04e-6■■□□□ 11.7
NKRFO15226 AGAP3-214ENST00000476375 1019 ntTSL 514.92□□□□□ -0.023e-7■■□□□ 11.7
NKRFO15226 TRA2A-209ENST00000494255 1653 ntTSL 1 (best)14.26□□□□□ -0.131e-12■■□□□ 11.7
NKRFO15226 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC14.08□□□□□ -0.164e-6■■□□□ 11.7
NKRFO15226 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC13.57□□□□□ -0.243e-7■■□□□ 11.7
NKRFO15226 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.354e-6■■□□□ 11.7
NKRFO15226 CHID1-207ENST00000524832 878 ntTSL 212.67□□□□□ -0.384e-6■■□□□ 11.7
NKRFO15226 H3F3B-210ENST00000591890 783 ntTSL 3 BASIC12.49□□□□□ -0.413e-7■■□□□ 11.7
NKRFO15226 CHID1-210ENST00000526714 976 ntTSL 511.93□□□□□ -0.54e-6■■□□□ 11.7
NKRFO15226 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC11.27□□□□□ -0.613e-7■■□□□ 11.7
NKRFO15226 OSBPL10-216ENST00000480671 492 ntTSL 311.11□□□□□ -0.633e-7■■□□□ 11.7
NKRFO15226 ATP11C-209ENST00000485626 643 ntTSL 57.3□□□□□ -1.242e-18■■□□□ 11.7
NKRFO15226 OSBPL10-207ENST00000465626 473 ntTSL 27.22□□□□□ -1.253e-7■■□□□ 11.7
NKRFO15226 FANCI-212ENST00000566895 4663 ntTSL 26.62□□□□□ -1.353e-7■■□□□ 11.7
NKRFO15226 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.493e-7■■□□□ 11.7
NKRFO15226 OSBPL10-214ENST00000479173 554 ntTSL 45.34□□□□□ -1.553e-7■■□□□ 11.7
NKRFO15226 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.633e-7■■□□□ 11.7
NKRFO15226 FANCI-210ENST00000565522 233 ntTSL 53.97□□□□□ -1.773e-7■■□□□ 11.7
NKRFO15226 FANCI-203ENST00000447611 3690 ntTSL 23.97□□□□□ -1.773e-7■■□□□ 11.7
NKRFO15226 FANCI-204ENST00000561894 3268 ntTSL 23.5□□□□□ -1.853e-7■■□□□ 11.7
NKRFO15226 CTDSP1-214ENST00000497677 998 ntTSL 218.41■□□□□ 0.541e-7■■□□□ 11.7
NKRFO15226 CTDSP1-202ENST00000428361 842 ntTSL 518.09■□□□□ 0.491e-7■■□□□ 11.7
NKRFO15226 CTDSP1-205ENST00000452977 818 ntTSL 518.09■□□□□ 0.491e-7■■□□□ 11.7
NKRFO15226 CTDSP1-212ENST00000494067 362 ntTSL 315.63■□□□□ 0.091e-7■■□□□ 11.7
NKRFO15226 FAM129B-207ENST00000484348 654 ntTSL 1 (best)26.84■■□□□ 1.893e-6■■□□□ 11.7
NKRFO15226 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.523e-6■■□□□ 11.7
NKRFO15226 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.72■□□□□ 0.113e-6■■□□□ 11.7
NKRFO15226 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.054e-6■■□□□ 11.7
NKRFO15226 SDC1-205ENST00000447124 591 ntTSL 424.14■■□□□ 1.454e-6■■□□□ 11.7
NKRFO15226 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.3■□□□□ 0.844e-6■■□□□ 11.7
NKRFO15226 SDC1-204ENST00000429035 646 ntTSL 316.97■□□□□ 0.314e-6■■□□□ 11.7
NKRFO15226 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.174e-6■■□□□ 11.7
NKRFO15226 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.044e-6■■□□□ 11.7
NKRFO15226 C2orf82-206ENST00000467665 2782 ntTSL 1 (best)21.51■■□□□ 1.031e-6■■□□□ 11.7
NKRFO15226 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.46■□□□□ 0.552e-7■■□□□ 11.7
NKRFO15226 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.45■□□□□ 0.542e-7■■□□□ 11.7
NKRFO15226 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.52e-7■■□□□ 11.7
NKRFO15226 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.462e-7■■□□□ 11.7
NKRFO15226 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.72■□□□□ 0.432e-7■■□□□ 11.7
NKRFO15226 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.72■□□□□ 0.432e-7■■□□□ 11.7
NKRFO15226 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.82■□□□□ 0.282e-7■■□□□ 11.7
NKRFO15226 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.222e-7■■□□□ 11.7
NKRFO15226 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.08■□□□□ 0.172e-7■■□□□ 11.7
NKRFO15226 USF2-215ENST00000602164 582 ntTSL 330.83■■■□□ 2.536e-6■■□□□ 11.7
NKRFO15226 CDC34-203ENST00000586788 900 ntTSL 228.31■■■□□ 2.126e-6■■□□□ 11.7
NKRFO15226 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.76e-6■■□□□ 11.7
NKRFO15226 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.52■■□□□ 1.686e-6■■□□□ 11.7
NKRFO15226 LIMS1-208ENST00000428064 637 ntTSL 224.56■■□□□ 1.526e-6■■□□□ 11.7
NKRFO15226 SYNE4-205ENST00000490730 1175 ntTSL 224.46■■□□□ 1.516e-6■■□□□ 11.7
NKRFO15226 USF2-216ENST00000607959 1920 ntTSL 524.18■■□□□ 1.466e-6■■□□□ 11.7
NKRFO15226 BRAF-202ENST00000469930 1058 ntTSL 223.5■■□□□ 1.351e-8■■□□□ 11.7
NKRFO15226 F7-203ENST00000444337 564 ntTSL 523.15■■□□□ 1.31e-8■■□□□ 11.7
NKRFO15226 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.296e-6■■□□□ 11.7
NKRFO15226 USF2-210ENST00000598058 510 ntTSL 222.83■■□□□ 1.256e-6■■□□□ 11.7
NKRFO15226 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.63■■□□□ 1.216e-6■■□□□ 11.7
NKRFO15226 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.176e-6■■□□□ 11.7
NKRFO15226 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.136e-6■■□□□ 11.7
NKRFO15226 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.07■■□□□ 1.126e-6■■□□□ 11.7
NKRFO15226 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.051e-8■■□□□ 11.7
NKRFO15226 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.43■■□□□ 1.026e-6■■□□□ 11.7
NKRFO15226 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 16e-6■■□□□ 11.7
NKRFO15226 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.946e-6■■□□□ 11.7
NKRFO15226 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.78■□□□□ 0.926e-6■■□□□ 11.7
NKRFO15226 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.77■□□□□ 0.926e-6■■□□□ 11.7
NKRFO15226 PLA2G4B-203ENST00000461382 1530 ntTSL 220.5■□□□□ 0.876e-6■■□□□ 11.7
NKRFO15226 SYNE4-204ENST00000465425 2339 ntTSL 220.37■□□□□ 0.856e-6■■□□□ 11.7
NKRFO15226 TSPAN4-212ENST00000494815 2187 ntTSL 220.34■□□□□ 0.856e-6■■□□□ 11.7
NKRFO15226 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.826e-6■■□□□ 11.7
NKRFO15226 AL049840.3-201ENST00000602669 611 ntBASIC20.16■□□□□ 0.826e-6■■□□□ 11.7
NKRFO15226 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.86e-6■■□□□ 11.7
Retrieved 100 of 9,198 protein–RNA pairs in 114.9 ms