RNA–Protein interactions for RNA: ENST00000534254.5

CHID1-224, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-224ENST00000534254 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.06
CHID1-224ENST00000534254 ABCC9O60706 1549 aa30.88■■■□□ 2.53
CHID1-224ENST00000534254 CCDC180Q9P1Z9 1646 aa30.75■■■□□ 2.51
CHID1-224ENST00000534254 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.28
CHID1-224ENST00000534254 DNAJC5BQ9UF47 199 aa29.01■■■□□ 2.23
CHID1-224ENST00000534254 NACADO15069 1562 aa29■■■□□ 2.23
CHID1-224ENST00000534254 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
CHID1-224ENST00000534254 UNC13AQ9UPW8 1703 aa28.89■■■□□ 2.21
CHID1-224ENST00000534254 PABPN1Q86U42 306 aaKnown RBP eCLIP28.73■■■□□ 2.19
CHID1-224ENST00000534254 BICRAQ9NZM4 1560 aa28.51■■■□□ 2.15
CHID1-224ENST00000534254 MYO15BQ96JP2 1530 aa28.46■■■□□ 2.15
CHID1-224ENST00000534254 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
CHID1-224ENST00000534254 SCRIBQ14160 1630 aa28.15■■■□□ 2.1
CHID1-224ENST00000534254 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
CHID1-224ENST00000534254 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.06
CHID1-224ENST00000534254 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
CHID1-224ENST00000534254 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
CHID1-224ENST00000534254 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
CHID1-224ENST00000534254 SMARCA4P51532 1647 aa26.77■■□□□ 1.88
CHID1-224ENST00000534254 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
CHID1-224ENST00000534254 ATAD2BQ9ULI0 1458 aa26.73■■□□□ 1.87
CHID1-224ENST00000534254 SMARCA2P51531 1590 aa26.62■■□□□ 1.85
CHID1-224ENST00000534254 ERCC6Q03468 1493 aa26.6■■□□□ 1.85
CHID1-224ENST00000534254 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
CHID1-224ENST00000534254 NESP48681 1621 aa26.55■■□□□ 1.84
CHID1-224ENST00000534254 BAZ1AQ9NRL2 1556 aaPredicted RBP26.53■■□□□ 1.84
CHID1-224ENST00000534254 DNAJC5Q9H3Z4 198 aa26.52■■□□□ 1.84
CHID1-224ENST00000534254 CUX2O14529 1486 aa26.48■■□□□ 1.83
CHID1-224ENST00000534254 BAZ1BQ9UIG0 1483 aaKnown RBP26.48■■□□□ 1.83
CHID1-224ENST00000534254 MROH2BQ7Z745 1585 aa26.43■■□□□ 1.82
CHID1-224ENST00000534254 PEG3Q9GZU2 1588 aa26.39■■□□□ 1.82
CHID1-224ENST00000534254 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
CHID1-224ENST00000534254 THOC2Q8NI27 1593 aaKnown RBP26.27■■□□□ 1.8
CHID1-224ENST00000534254 LAMC3Q9Y6N6 1575 aa26.21■■□□□ 1.79
CHID1-224ENST00000534254 WIZO95785 1651 aa26.2■■□□□ 1.78
CHID1-224ENST00000534254 PDS5BQ9NTI5 1447 aa25.98■■□□□ 1.75
CHID1-224ENST00000534254 CADPSQ9ULU8 1353 aa25.94■■□□□ 1.74
CHID1-224ENST00000534254 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
CHID1-224ENST00000534254 WDR62O43379 1518 aa25.8■■□□□ 1.72
CHID1-224ENST00000534254 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
CHID1-224ENST00000534254 CEP164Q9UPV0 1460 aa25.75■■□□□ 1.71
CHID1-224ENST00000534254 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
CHID1-224ENST00000534254 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
CHID1-224ENST00000534254 CFTRP13569 1480 aa25.64■■□□□ 1.69
CHID1-224ENST00000534254 PRDM2Q13029 1718 aa25.62■■□□□ 1.69
CHID1-224ENST00000534254 URB2Q14146 1524 aaKnown RBP25.57■■□□□ 1.68
CHID1-224ENST00000534254 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
CHID1-224ENST00000534254 CCDC88BA6NC98 1476 aa25.45■■□□□ 1.66
CHID1-224ENST00000534254 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
CHID1-224ENST00000534254 TOPBP1Q92547 1522 aa25.26■■□□□ 1.63
CHID1-224ENST00000534254 OSCARQ8IYS5 282 aa25.23■■□□□ 1.63
CHID1-224ENST00000534254 IFT140Q96RY7 1462 aa25.18■■□□□ 1.62
CHID1-224ENST00000534254 EIF4G3O43432 1585 aaKnown RBP25.17■■□□□ 1.62
CHID1-224ENST00000534254 DNMBPQ6XZF7 1577 aa25.14■■□□□ 1.62
CHID1-224ENST00000534254 RIMBP3CA6NJZ7 1639 aa25.12■■□□□ 1.61
CHID1-224ENST00000534254 RIMBP3BA6NNM3 1639 aa25.12■■□□□ 1.61
CHID1-224ENST00000534254 RIMBP3Q9UFD9 1639 aa25.12■■□□□ 1.61
CHID1-224ENST00000534254 CHD1O14646 1710 aa25.09■■□□□ 1.61
CHID1-224ENST00000534254 TARBP1Q13395 1621 aaKnown RBP25.07■■□□□ 1.6
CHID1-224ENST00000534254 ABCC8Q09428 1581 aa25.03■■□□□ 1.6
CHID1-224ENST00000534254 AQRO60306 1485 aaKnown RBP eCLIP25.02■■□□□ 1.61e-6■■■■■ 31.4
CHID1-224ENST00000534254 POLA1P09884 1462 aaPredicted RBP24.98■■□□□ 1.59
CHID1-224ENST00000534254 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
CHID1-224ENST00000534254 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
CHID1-224ENST00000534254 FBLN2P98095 1184 aa24.86■■□□□ 1.57
CHID1-224ENST00000534254 FGD5Q6ZNL6 1462 aa24.85■■□□□ 1.57
CHID1-224ENST00000534254 TDRD9Q8NDG6 1382 aaKnown RBP24.84■■□□□ 1.57
CHID1-224ENST00000534254 CUX1P39880 1505 aa24.83■■□□□ 1.57
CHID1-224ENST00000534254 SOGA1O94964 1423 aa24.82■■□□□ 1.56
CHID1-224ENST00000534254 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
CHID1-224ENST00000534254 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
CHID1-224ENST00000534254 CYB5RLQ6IPT4 315 aa24.75■■□□□ 1.55
CHID1-224ENST00000534254 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
CHID1-224ENST00000534254 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
CHID1-224ENST00000534254 PBRM1Q86U86 1689 aa24.71■■□□□ 1.55
CHID1-224ENST00000534254 CLASP1Q7Z460 1538 aa24.64■■□□□ 1.53
CHID1-224ENST00000534254 GRIN2BQ13224 1484 aa24.6■■□□□ 1.53
CHID1-224ENST00000534254 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
CHID1-224ENST00000534254 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
CHID1-224ENST00000534254 CHMP7Q8WUX9 453 aaPredicted RBP24.57■■□□□ 1.52
CHID1-224ENST00000534254 ABCA5Q8WWZ7 1642 aa24.55■■□□□ 1.52
CHID1-224ENST00000534254 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
CHID1-224ENST00000534254 GAPVD1Q14C86 1478 aa24.53■■□□□ 1.52
CHID1-224ENST00000534254 TRHP20396 242 aaPredicted RBP24.51■■□□□ 1.51
CHID1-224ENST00000534254 ABCA10Q8WWZ4 1543 aa24.49■■□□□ 1.51
CHID1-224ENST00000534254 BIVM-ERCC5R4GMW8 1640 aa24.43■■□□□ 1.5
CHID1-224ENST00000534254 TOP2BQ02880 1626 aa24.39■■□□□ 1.49
CHID1-224ENST00000534254 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
CHID1-224ENST00000534254 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
CHID1-224ENST00000534254 WRNQ14191 1432 aaPredicted RBP eCLIP24.34■■□□□ 1.491e-9■■■■■ 46
CHID1-224ENST00000534254 CEP170Q5SW79 1584 aa24.33■■□□□ 1.49
CHID1-224ENST00000534254 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
CHID1-224ENST00000534254 NUP160Q12769 1436 aa24.2■■□□□ 1.46
CHID1-224ENST00000534254 SHROOM2Q13796 1616 aa24.19■■□□□ 1.46
CHID1-224ENST00000534254 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
CHID1-224ENST00000534254 ERICH3Q5RHP9 1530 aa24.16■■□□□ 1.46
CHID1-224ENST00000534254 KIF13AQ9H1H9 1805 aa24.04■■□□□ 1.44
CHID1-224ENST00000534254 RUSC2Q8N2Y8 1516 aa24.04■■□□□ 1.44
CHID1-224ENST00000534254 PRG4Q92954 1404 aaPredicted RBP24.02■■□□□ 1.44
CHID1-224ENST00000534254 JPH4Q96JJ6 628 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms