RNA–Protein interactions for RNA: ENST00000376959.6

KCNC3-201, Transcript of potassium voltage-gated channel subfamily C member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNC3, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC3-201ENST00000376959 DCAF8L2P0C7V8 631 aa37.11■■■■□ 3.53
KCNC3-201ENST00000376959 PELP1Q8IZL8 1130 aaKnown RBP36.23■■■■□ 3.39
KCNC3-201ENST00000376959 SUPT5HO00267 1087 aaKnown RBP35.82■■■■□ 3.33
KCNC3-201ENST00000376959 EHMT2Q96KQ7 1210 aa34.85■■■■□ 3.17
KCNC3-201ENST00000376959 ERICH6Q7L0X2 663 aa34.7■■■■□ 3.14
KCNC3-201ENST00000376959 APLP2Q06481 763 aa34.66■■■■□ 3.14
KCNC3-201ENST00000376959 SHROOM4Q9ULL8 1493 aa34.63■■■■□ 3.13
KCNC3-201ENST00000376959 CENPBP07199 599 aaPredicted RBP34.59■■■■□ 3.13
KCNC3-201ENST00000376959 CCER1Q8TC90 406 aaPredicted RBP34.54■■■■□ 3.12
KCNC3-201ENST00000376959 MYT1Q01538 1121 aa34.53■■■■□ 3.12
KCNC3-201ENST00000376959 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
KCNC3-201ENST00000376959 PCGF6Q9BYE7 350 aa34.32■■■■□ 3.08
KCNC3-201ENST00000376959 ZEB1P37275 1124 aaPredicted RBP34.2■■■■□ 3.07
KCNC3-201ENST00000376959 FAM9AQ8IZU1 332 aaPredicted RBP33.87■■■■□ 3.01
KCNC3-201ENST00000376959 TTBK1Q5TCY1 1321 aaPredicted RBP33.87■■■■□ 3.01
KCNC3-201ENST00000376959 NEFLP07196 543 aa33.76■■■■□ 3
KCNC3-201ENST00000376959 YTHDC1Q96MU7 727 aaKnown RBP33.43■■■□□ 2.94
KCNC3-201ENST00000376959 TRIM41Q8WV44 630 aa33.16■■■□□ 2.9
KCNC3-201ENST00000376959 RANGAP1P46060 587 aaPredicted RBP33.15■■■□□ 2.9
KCNC3-201ENST00000376959 ATP1B4Q9UN42 357 aaPredicted RBP32.97■■■□□ 2.87
KCNC3-201ENST00000376959 DAXXQ9UER7 740 aaPredicted RBP32.95■■■□□ 2.87
KCNC3-201ENST00000376959 UBTFP17480 764 aaKnown RBP32.88■■■□□ 2.85
KCNC3-201ENST00000376959 TRIM26Q12899 539 aaPredicted RBP32.72■■■□□ 2.83
KCNC3-201ENST00000376959 HRCP23327 699 aa32.7■■■□□ 2.83
KCNC3-201ENST00000376959 PPARGC1BQ86YN6 1023 aaKnown RBP32.43■■■□□ 2.78
KCNC3-201ENST00000376959 RTL5Q5HYW3 569 aaPredicted RBP32.4■■■□□ 2.78
KCNC3-201ENST00000376959 POLR3GLQ9BT43 218 aa32.16■■■□□ 2.74
KCNC3-201ENST00000376959 ZNF316A6NFI3 1004 aaPredicted RBP32.14■■■□□ 2.74
KCNC3-201ENST00000376959 ITGAEP38570 1179 aa32■■■□□ 2.71
KCNC3-201ENST00000376959 DIEXFQ68CQ4 756 aaKnown RBP31.93■■■□□ 2.7
KCNC3-201ENST00000376959 CLSPNQ9HAW4 1339 aa31.91■■■□□ 2.7
KCNC3-201ENST00000376959 HNRNPUL2Q1KMD3 747 aaKnown RBP31.87■■■□□ 2.69
KCNC3-201ENST00000376959 CNGB1Q14028 1251 aaPredicted RBP31.81■■■□□ 2.68
KCNC3-201ENST00000376959 LOC105371045A0A1W2PR82 267 aa31.68■■■□□ 2.66
KCNC3-201ENST00000376959 MYT1LQ9UL68 1186 aa31.63■■■□□ 2.65
KCNC3-201ENST00000376959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.61■■■□□ 2.65
KCNC3-201ENST00000376959 GTF3C3Q9Y5Q9 886 aa31.61■■■□□ 2.65
KCNC3-201ENST00000376959 CHIC1Q5VXU3 224 aa31.53■■■□□ 2.64
KCNC3-201ENST00000376959 CDK11AQ9UQ88 783 aaPredicted RBP31.53■■■□□ 2.64
KCNC3-201ENST00000376959 BCANQ96GW7 911 aa31.49■■■□□ 2.63
KCNC3-201ENST00000376959 SLC4A1APQ9BWU0 796 aaKnown RBP31.43■■■□□ 2.62
KCNC3-201ENST00000376959 ANP32CO43423 234 aa31.24■■■□□ 2.59
KCNC3-201ENST00000376959 ZBTB47Q9UFB7 747 aaPredicted RBP31.15■■■□□ 2.58
KCNC3-201ENST00000376959 ACIN1Q9UKV3 1341 aaKnown RBP31.08■■■□□ 2.57
KCNC3-201ENST00000376959 ANP32AP39687 249 aaKnown RBP31.08■■■□□ 2.57
KCNC3-201ENST00000376959 FAM50AQ14320 339 aaKnown RBP31.08■■■□□ 2.57
KCNC3-201ENST00000376959 NEUROD1Q13562 356 aa31.05■■■□□ 2.56
KCNC3-201ENST00000376959 TRIM52Q96A61 297 aa31.03■■■□□ 2.56
KCNC3-201ENST00000376959 EIF5BO60841 1220 aaKnown RBP30.95■■■□□ 2.54
KCNC3-201ENST00000376959 CANXP27824 592 aaKnown RBP30.88■■■□□ 2.53
KCNC3-201ENST00000376959 GLIPR1L2Q4G1C9 344 aa30.82■■■□□ 2.52
KCNC3-201ENST00000376959 ANP32BQ92688 251 aaKnown RBP30.76■■■□□ 2.52
KCNC3-201ENST00000376959 ZNF326Q5BKZ1 582 aaKnown RBP30.74■■■□□ 2.51
KCNC3-201ENST00000376959 NPM2Q86SE8 214 aaKnown RBP30.72■■■□□ 2.51
KCNC3-201ENST00000376959 BCL11AQ9H165 835 aa30.59■■■□□ 2.49
KCNC3-201ENST00000376959 NEFMP07197 916 aa30.56■■■□□ 2.48
KCNC3-201ENST00000376959 FKBP8Q14318 412 aa30.53■■■□□ 2.48
KCNC3-201ENST00000376959 HSP90AA1P07900 732 aaKnown RBP30.44■■■□□ 2.46
KCNC3-201ENST00000376959 UPF2Q9HAU5 1272 aaKnown RBP30.41■■■□□ 2.46
KCNC3-201ENST00000376959 SLC24A1O60721 1099 aa30.4■■■□□ 2.46
KCNC3-201ENST00000376959 NBR1Q14596 966 aa30.24■■■□□ 2.43
KCNC3-201ENST00000376959 HNRNPUQ00839 825 aaKnown RBP eCLIP30.22■■■□□ 2.43
KCNC3-201ENST00000376959 CCDC136Q96JN2 1154 aa30.12■■■□□ 2.41
KCNC3-201ENST00000376959 FAM9BQ8IZU0 186 aa30.03■■■□□ 2.4
KCNC3-201ENST00000376959 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.01■■■□□ 2.39
KCNC3-201ENST00000376959 TONSLQ96HA7 1378 aa30.01■■■□□ 2.39
KCNC3-201ENST00000376959 ARXQ96QS3 562 aa29.98■■■□□ 2.39
KCNC3-201ENST00000376959 DDX10Q13206 875 aaKnown RBP29.97■■■□□ 2.39
KCNC3-201ENST00000376959 SCAF1Q9H7N4 1312 aaKnown RBP29.91■■■□□ 2.38
KCNC3-201ENST00000376959 CSRNP3Q8WYN3 585 aa29.87■■■□□ 2.37
KCNC3-201ENST00000376959 TMC1Q8TDI8 760 aa29.83■■■□□ 2.37
KCNC3-201ENST00000376959 SALL2Q9Y467 1007 aaPredicted RBP29.81■■■□□ 2.36
KCNC3-201ENST00000376959 ANP32EQ9BTT0 268 aa29.79■■■□□ 2.36
KCNC3-201ENST00000376959 P3H3Q8IVL6 736 aa29.78■■■□□ 2.36
KCNC3-201ENST00000376959 DDRGK1Q96HY6 314 aa29.78■■■□□ 2.36
KCNC3-201ENST00000376959 TRIM44Q96DX7 344 aaPredicted RBP29.77■■■□□ 2.36
KCNC3-201ENST00000376959 ZNF777Q9ULD5 760 aaPredicted RBP29.74■■■□□ 2.35
KCNC3-201ENST00000376959 TNNT2P45379 298 aaPredicted RBP29.73■■■□□ 2.35
KCNC3-201ENST00000376959 MRS2Q9HD23 443 aa29.71■■■□□ 2.35
KCNC3-201ENST00000376959 BECN1Q14457 450 aa29.7■■■□□ 2.35
KCNC3-201ENST00000376959 FBLN2P98095 1184 aa29.7■■■□□ 2.34
KCNC3-201ENST00000376959 DCAF1Q9Y4B6 1507 aa29.69■■■□□ 2.34
KCNC3-201ENST00000376959 WDR43Q15061 677 aaKnown RBP eCLIP29.67■■■□□ 2.34
KCNC3-201ENST00000376959 ARID3CA6NKF2 412 aa29.67■■■□□ 2.34
KCNC3-201ENST00000376959 ABCC9O60706 1549 aa29.65■■■□□ 2.34
KCNC3-201ENST00000376959 IRX6P78412 446 aaPredicted RBP29.63■■■□□ 2.33
KCNC3-201ENST00000376959 MIER1Q8N108 512 aa29.62■■■□□ 2.33
KCNC3-201ENST00000376959 GOLGA6L22H0YM25 854 aa29.58■■■□□ 2.33
KCNC3-201ENST00000376959 NCLP19338 710 aaKnown RBP29.58■■■□□ 2.33
KCNC3-201ENST00000376959 ERICH6BQ5W0A0 696 aa29.57■■■□□ 2.32
KCNC3-201ENST00000376959 MYH16Q9H6N6 1097 aa29.56■■■□□ 2.32
KCNC3-201ENST00000376959 CDK11BP21127 795 aaKnown RBP29.55■■■□□ 2.32
KCNC3-201ENST00000376959 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
KCNC3-201ENST00000376959 PPM1GO15355 546 aaPredicted RBP29.5■■■□□ 2.31
KCNC3-201ENST00000376959 CHGAP10645 457 aaKnown RBP29.49■■■□□ 2.31
KCNC3-201ENST00000376959 PTMAP06454 111 aaKnown RBP29.41■■■□□ 2.3
KCNC3-201ENST00000376959 STAG3Q9UJ98 1225 aa29.39■■■□□ 2.3
KCNC3-201ENST00000376959 ESF1Q9H501 851 aaKnown RBP29.37■■■□□ 2.29
KCNC3-201ENST00000376959 NAP1L5Q96NT1 182 aaPredicted RBP29.35■■■□□ 2.29
KCNC3-201ENST00000376959 DNTTIP2Q5QJE6 756 aaKnown RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms