RNA–Protein interactions for RNA: ENST00000454838.6

CHID1-205, Transcript of chitinase domain containing 1, humanhuman

TSL 5 BASIC

Gene CHID1, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-205ENST00000454838 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
CHID1-205ENST00000454838 SHROOM4Q9ULL8 1493 aa22.39■■□□□ 1.17
CHID1-205ENST00000454838 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
CHID1-205ENST00000454838 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
CHID1-205ENST00000454838 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
CHID1-205ENST00000454838 ZCCHC6Q5VYS8 1495 aaKnown RBP21.33■■□□□ 1
CHID1-205ENST00000454838 ABCC9O60706 1549 aa21.29■■□□□ 1
CHID1-205ENST00000454838 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
CHID1-205ENST00000454838 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
CHID1-205ENST00000454838 PCGF6Q9BYE7 350 aa20.75■□□□□ 0.91
CHID1-205ENST00000454838 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
CHID1-205ENST00000454838 LOC105371045A0A1W2PR82 267 aa20.71■□□□□ 0.91
CHID1-205ENST00000454838 SCRIBQ14160 1630 aa20.67■□□□□ 0.9
CHID1-205ENST00000454838 DCAF1Q9Y4B6 1507 aa20.55■□□□□ 0.88
CHID1-205ENST00000454838 PPARGC1BQ86YN6 1023 aaKnown RBP20.51■□□□□ 0.87
CHID1-205ENST00000454838 FAM9AQ8IZU1 332 aaPredicted RBP20.49■□□□□ 0.87
CHID1-205ENST00000454838 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
CHID1-205ENST00000454838 HRCP23327 699 aa20.38■□□□□ 0.85
CHID1-205ENST00000454838 NACADO15069 1562 aa20.28■□□□□ 0.84
CHID1-205ENST00000454838 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
CHID1-205ENST00000454838 CECR2Q9BXF3 1484 aa20.17■□□□□ 0.82
CHID1-205ENST00000454838 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
CHID1-205ENST00000454838 RSF1Q96T23 1441 aaPredicted RBP20.03■□□□□ 0.8
CHID1-205ENST00000454838 TTBK1Q5TCY1 1321 aaPredicted RBP19.98■□□□□ 0.79
CHID1-205ENST00000454838 MROH2BQ7Z745 1585 aa19.91■□□□□ 0.78
CHID1-205ENST00000454838 TRIM26Q12899 539 aaPredicted RBP19.89■□□□□ 0.77
CHID1-205ENST00000454838 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
CHID1-205ENST00000454838 WIZO95785 1651 aa19.76■□□□□ 0.75
CHID1-205ENST00000454838 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
CHID1-205ENST00000454838 BAZ1AQ9NRL2 1556 aaPredicted RBP19.54■□□□□ 0.72
CHID1-205ENST00000454838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.54■□□□□ 0.72
CHID1-205ENST00000454838 SMARCA4P51532 1647 aa19.49■□□□□ 0.71
CHID1-205ENST00000454838 RANGAP1P46060 587 aaPredicted RBP19.48■□□□□ 0.71
CHID1-205ENST00000454838 CCER1Q8TC90 406 aaPredicted RBP19.39■□□□□ 0.69
CHID1-205ENST00000454838 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
CHID1-205ENST00000454838 UBTFP17480 764 aaKnown RBP19.35■□□□□ 0.69
CHID1-205ENST00000454838 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
CHID1-205ENST00000454838 ZEB1P37275 1124 aaPredicted RBP19.27■□□□□ 0.68
CHID1-205ENST00000454838 ATAD2BQ9ULI0 1458 aa19.25■□□□□ 0.67
CHID1-205ENST00000454838 TOP2AP11388 1531 aaKnown RBP19.23■□□□□ 0.67
CHID1-205ENST00000454838 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
CHID1-205ENST00000454838 SOGA1O94964 1423 aa19.19■□□□□ 0.66
CHID1-205ENST00000454838 SMARCA2P51531 1590 aa19.18■□□□□ 0.66
CHID1-205ENST00000454838 DNAJC5BQ9UF47 199 aa19.18■□□□□ 0.66
CHID1-205ENST00000454838 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
CHID1-205ENST00000454838 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
CHID1-205ENST00000454838 HNRNPUL2Q1KMD3 747 aaKnown RBP19.1■□□□□ 0.65
CHID1-205ENST00000454838 CSRNP3Q8WYN3 585 aa19.04■□□□□ 0.64
CHID1-205ENST00000454838 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
CHID1-205ENST00000454838 CEP162Q5TB80 1403 aa19.02■□□□□ 0.64
CHID1-205ENST00000454838 YTHDC1Q96MU7 727 aaKnown RBP18.96■□□□□ 0.63
CHID1-205ENST00000454838 PEG3Q9GZU2 1588 aa18.92■□□□□ 0.62
CHID1-205ENST00000454838 DIEXFQ68CQ4 756 aaKnown RBP18.91■□□□□ 0.62
CHID1-205ENST00000454838 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
CHID1-205ENST00000454838 NCAPD3P42695 1498 aa18.88■□□□□ 0.61
CHID1-205ENST00000454838 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.611e-9■■■■■ 46
CHID1-205ENST00000454838 NEUROD1Q13562 356 aa18.85■□□□□ 0.61
CHID1-205ENST00000454838 APLP2Q06481 763 aa18.82■□□□□ 0.6
CHID1-205ENST00000454838 TNIKQ9UKE5 1360 aa18.78■□□□□ 0.6
CHID1-205ENST00000454838 ITGAEP38570 1179 aa18.75■□□□□ 0.59
CHID1-205ENST00000454838 NESP48681 1621 aa18.74■□□□□ 0.59
CHID1-205ENST00000454838 SYNJ1O43426 1573 aa18.74■□□□□ 0.59
CHID1-205ENST00000454838 GTF3C3Q9Y5Q9 886 aa18.71■□□□□ 0.59
CHID1-205ENST00000454838 GOLGA3Q08378 1498 aa18.7■□□□□ 0.58
CHID1-205ENST00000454838 HMGXB3Q12766 1538 aa18.69■□□□□ 0.58
CHID1-205ENST00000454838 ACIN1Q9UKV3 1341 aaKnown RBP18.68■□□□□ 0.58
CHID1-205ENST00000454838 CLIP1P30622 1438 aa18.67■□□□□ 0.58
CHID1-205ENST00000454838 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
CHID1-205ENST00000454838 RAPGEF2Q9Y4G8 1499 aa18.62■□□□□ 0.57
CHID1-205ENST00000454838 ZNF316A6NFI3 1004 aaPredicted RBP18.61■□□□□ 0.57
CHID1-205ENST00000454838 CFTRP13569 1480 aa18.59■□□□□ 0.57
CHID1-205ENST00000454838 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.56
CHID1-205ENST00000454838 CENPBP07199 599 aaPredicted RBP18.57■□□□□ 0.56
CHID1-205ENST00000454838 MIER1Q8N108 512 aa18.57■□□□□ 0.56
CHID1-205ENST00000454838 EEA1Q15075 1411 aa18.55■□□□□ 0.56
CHID1-205ENST00000454838 CEP164Q9UPV0 1460 aa18.54■□□□□ 0.56
CHID1-205ENST00000454838 CUX1P39880 1505 aa18.53■□□□□ 0.56
CHID1-205ENST00000454838 KANK4Q5T7N3 995 aaPredicted RBP18.52■□□□□ 0.55
CHID1-205ENST00000454838 P3H3Q8IVL6 736 aa18.49■□□□□ 0.55
CHID1-205ENST00000454838 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.55
CHID1-205ENST00000454838 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
CHID1-205ENST00000454838 RAD54L2Q9Y4B4 1467 aa18.41■□□□□ 0.54
CHID1-205ENST00000454838 TOP2BQ02880 1626 aa18.4■□□□□ 0.54
CHID1-205ENST00000454838 CUX2O14529 1486 aa18.38■□□□□ 0.53
CHID1-205ENST00000454838 PELP1Q8IZL8 1130 aaKnown RBP18.38■□□□□ 0.53
CHID1-205ENST00000454838 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
CHID1-205ENST00000454838 KIF21BO75037 1637 aa18.34■□□□□ 0.53
CHID1-205ENST00000454838 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.53
CHID1-205ENST00000454838 KIF27Q86VH2 1401 aa18.29■□□□□ 0.52
CHID1-205ENST00000454838 FAM50AQ14320 339 aaKnown RBP18.29■□□□□ 0.52
CHID1-205ENST00000454838 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
CHID1-205ENST00000454838 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
CHID1-205ENST00000454838 ARAP1Q96P48 1450 aa18.24■□□□□ 0.51
CHID1-205ENST00000454838 IGF1RP08069 1367 aa18.23■□□□□ 0.51
CHID1-205ENST00000454838 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
CHID1-205ENST00000454838 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
CHID1-205ENST00000454838 POLA1P09884 1462 aaPredicted RBP18.21■□□□□ 0.51
CHID1-205ENST00000454838 PDS5BQ9NTI5 1447 aa18.19■□□□□ 0.5
CHID1-205ENST00000454838 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
CHID1-205ENST00000454838 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms