RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 NISCHQ9Y2I1 1504 aa41.75■■■■■ 4.27
BRAF-201ENST00000288602 CCDC180Q9P1Z9 1646 aa35.81■■■■□ 3.32
BRAF-201ENST00000288602 ZCCHC6Q5VYS8 1495 aaKnown RBP35.17■■■■□ 3.22
BRAF-201ENST00000288602 SHROOM4Q9ULL8 1493 aa35.13■■■■□ 3.21
BRAF-201ENST00000288602 DCAF8L2P0C7V8 631 aa34.84■■■■□ 3.17
BRAF-201ENST00000288602 DCAF1Q9Y4B6 1507 aa34.24■■■■□ 3.07
BRAF-201ENST00000288602 SUPT5HO00267 1087 aaKnown RBP34.13■■■■□ 3.05
BRAF-201ENST00000288602 ABCC9O60706 1549 aa33.75■■■□□ 2.99
BRAF-201ENST00000288602 MYO15BQ96JP2 1530 aa33.5■■■□□ 2.95
BRAF-201ENST00000288602 SCRIBQ14160 1630 aa33.47■■■□□ 2.95
BRAF-201ENST00000288602 NACADO15069 1562 aa33.26■■■□□ 2.91
BRAF-201ENST00000288602 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
BRAF-201ENST00000288602 CHIC1Q5VXU3 224 aa32.84■■■□□ 2.85
BRAF-201ENST00000288602 RSF1Q96T23 1441 aaPredicted RBP32.78■■■□□ 2.84
BRAF-201ENST00000288602 CECR2Q9BXF3 1484 aa32.62■■■□□ 2.81
BRAF-201ENST00000288602 MROH2BQ7Z745 1585 aa32.43■■■□□ 2.78
BRAF-201ENST00000288602 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
BRAF-201ENST00000288602 WIZO95785 1651 aa32.24■■■□□ 2.75
BRAF-201ENST00000288602 PABPN1Q86U42 306 aaKnown RBP eCLIP32.16■■■□□ 2.74
BRAF-201ENST00000288602 BAZ1AQ9NRL2 1556 aaPredicted RBP32.11■■■□□ 2.73
BRAF-201ENST00000288602 BICRAQ9NZM4 1560 aa32■■■□□ 2.71
BRAF-201ENST00000288602 SMARCA4P51532 1647 aa31.94■■■□□ 2.7
BRAF-201ENST00000288602 LOC105371045A0A1W2PR82 267 aa31.87■■■□□ 2.69
BRAF-201ENST00000288602 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
BRAF-201ENST00000288602 TOP2AP11388 1531 aaKnown RBP31.7■■■□□ 2.66
BRAF-201ENST00000288602 FAM9AQ8IZU1 332 aaPredicted RBP31.56■■■□□ 2.64
BRAF-201ENST00000288602 CCDC88BA6NC98 1476 aa31.56■■■□□ 2.64
BRAF-201ENST00000288602 SMARCA2P51531 1590 aa31.51■■■□□ 2.64
BRAF-201ENST00000288602 EIF4G1Q04637 1599 aaKnown RBP31.47■■■□□ 2.63
BRAF-201ENST00000288602 PEG3Q9GZU2 1588 aa31.34■■■□□ 2.61
BRAF-201ENST00000288602 EHMT2Q96KQ7 1210 aa31.34■■■□□ 2.61
BRAF-201ENST00000288602 ATAD2BQ9ULI0 1458 aa31.28■■■□□ 2.6
BRAF-201ENST00000288602 ABCC8Q09428 1581 aa31.28■■■□□ 2.6
BRAF-201ENST00000288602 BAZ1BQ9UIG0 1483 aaKnown RBP31.16■■■□□ 2.58
BRAF-201ENST00000288602 PCGF6Q9BYE7 350 aa31.15■■■□□ 2.58
BRAF-201ENST00000288602 SOGA1O94964 1423 aa30.85■■■□□ 2.53
BRAF-201ENST00000288602 WRNQ14191 1432 aaPredicted RBP eCLIP30.81■■■□□ 2.52
BRAF-201ENST00000288602 NCAPD3P42695 1498 aa30.78■■■□□ 2.52
BRAF-201ENST00000288602 RUSC2Q8N2Y8 1516 aa30.74■■■□□ 2.51
BRAF-201ENST00000288602 HMGXB3Q12766 1538 aa30.72■■■□□ 2.51
BRAF-201ENST00000288602 SYNJ1O43426 1573 aa30.7■■■□□ 2.5
BRAF-201ENST00000288602 TRIM26Q12899 539 aaPredicted RBP30.68■■■□□ 2.5
BRAF-201ENST00000288602 HRCP23327 699 aa30.63■■■□□ 2.49
BRAF-201ENST00000288602 CSRNP3Q8WYN3 585 aa30.59■■■□□ 2.49
BRAF-201ENST00000288602 EEA1Q15075 1411 aa30.52■■■□□ 2.48
BRAF-201ENST00000288602 PPARGC1BQ86YN6 1023 aaKnown RBP30.49■■■□□ 2.47
BRAF-201ENST00000288602 UBTFP17480 764 aaKnown RBP30.43■■■□□ 2.46
BRAF-201ENST00000288602 CC2D2AQ9P2K1 1620 aa30.4■■■□□ 2.46
BRAF-201ENST00000288602 TOP2BQ02880 1626 aa30.37■■■□□ 2.45
BRAF-201ENST00000288602 CEP162Q5TB80 1403 aa30.36■■■□□ 2.45
BRAF-201ENST00000288602 TNIKQ9UKE5 1360 aa30.35■■■□□ 2.45
BRAF-201ENST00000288602 CFTRP13569 1480 aa30.35■■■□□ 2.45
BRAF-201ENST00000288602 GOLGA3Q08378 1498 aa30.3■■■□□ 2.44
BRAF-201ENST00000288602 BIVM-ERCC5R4GMW8 1640 aa30.27■■■□□ 2.44
BRAF-201ENST00000288602 CUX1P39880 1505 aa30.24■■■□□ 2.43
BRAF-201ENST00000288602 CEP164Q9UPV0 1460 aa30.2■■■□□ 2.43
BRAF-201ENST00000288602 KIF21BO75037 1637 aa30.16■■■□□ 2.42
BRAF-201ENST00000288602 CADPSQ9ULU8 1353 aa30.15■■■□□ 2.42
BRAF-201ENST00000288602 TTBK1Q5TCY1 1321 aaPredicted RBP30.13■■■□□ 2.41
BRAF-201ENST00000288602 RAPGEF2Q9Y4G8 1499 aa30.12■■■□□ 2.41
BRAF-201ENST00000288602 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
BRAF-201ENST00000288602 RANGAP1P46060 587 aaPredicted RBP30.03■■■□□ 2.4
BRAF-201ENST00000288602 CLIP1P30622 1438 aa29.94■■■□□ 2.38
BRAF-201ENST00000288602 KIF27Q86VH2 1401 aa29.91■■■□□ 2.38
BRAF-201ENST00000288602 NESP48681 1621 aa29.89■■■□□ 2.37
BRAF-201ENST00000288602 PRXQ9BXM0 1461 aa29.88■■■□□ 2.37
BRAF-201ENST00000288602 FANCD2Q9BXW9 1451 aa29.86■■■□□ 2.37
BRAF-201ENST00000288602 DNAJC5BQ9UF47 199 aa29.85■■■□□ 2.37
BRAF-201ENST00000288602 FGD5Q6ZNL6 1462 aa29.8■■■□□ 2.36
BRAF-201ENST00000288602 ERICH3Q5RHP9 1530 aa29.79■■■□□ 2.36
BRAF-201ENST00000288602 CUX2O14529 1486 aa29.79■■■□□ 2.36
BRAF-201ENST00000288602 VPS8Q8N3P4 1428 aa29.71■■■□□ 2.35
BRAF-201ENST00000288602 IGF1RP08069 1367 aa29.66■■■□□ 2.34
BRAF-201ENST00000288602 ZEB1P37275 1124 aaPredicted RBP29.65■■■□□ 2.34
BRAF-201ENST00000288602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.65■■■□□ 2.34
BRAF-201ENST00000288602 RAD54L2Q9Y4B4 1467 aa29.6■■■□□ 2.33
BRAF-201ENST00000288602 DNMBPQ6XZF7 1577 aa29.6■■■□□ 2.33
BRAF-201ENST00000288602 TOPBP1Q92547 1522 aa29.59■■■□□ 2.33
BRAF-201ENST00000288602 LAMC3Q9Y6N6 1575 aa29.57■■■□□ 2.32
BRAF-201ENST00000288602 APLP2Q06481 763 aa29.56■■■□□ 2.32
BRAF-201ENST00000288602 ARAP1Q96P48 1450 aa29.55■■■□□ 2.32
BRAF-201ENST00000288602 POLA1P09884 1462 aaPredicted RBP29.54■■■□□ 2.32
BRAF-201ENST00000288602 CARMIL1Q5VZK9 1371 aa29.53■■■□□ 2.32
BRAF-201ENST00000288602 CCER1Q8TC90 406 aaPredicted RBP29.49■■■□□ 2.31
BRAF-201ENST00000288602 URB2Q14146 1524 aaKnown RBP29.47■■■□□ 2.31
BRAF-201ENST00000288602 ABCA10Q8WWZ4 1543 aa29.43■■■□□ 2.3
BRAF-201ENST00000288602 ARHGAP35Q9NRY4 1499 aa29.41■■■□□ 2.3
BRAF-201ENST00000288602 PDS5BQ9NTI5 1447 aa29.41■■■□□ 2.3
BRAF-201ENST00000288602 KIF21AQ7Z4S6 1674 aa29.37■■■□□ 2.29
BRAF-201ENST00000288602 HNRNPUL2Q1KMD3 747 aaKnown RBP29.35■■■□□ 2.29
BRAF-201ENST00000288602 KANK4Q5T7N3 995 aaPredicted RBP29.33■■■□□ 2.29
BRAF-201ENST00000288602 TDRD9Q8NDG6 1382 aaKnown RBP29.28■■■□□ 2.28
BRAF-201ENST00000288602 P3H3Q8IVL6 736 aa29.22■■■□□ 2.27
BRAF-201ENST00000288602 WDR97A6NE52 1622 aa29.22■■■□□ 2.27
BRAF-201ENST00000288602 CUL7Q14999 1698 aa29.14■■■□□ 2.26
BRAF-201ENST00000288602 GAPVD1Q14C86 1478 aa29.12■■■□□ 2.25
BRAF-201ENST00000288602 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
BRAF-201ENST00000288602 TARBP1Q13395 1621 aaKnown RBP29.05■■■□□ 2.24
BRAF-201ENST00000288602 FHOD3Q2V2M9 1422 aa29.03■■■□□ 2.24
BRAF-201ENST00000288602 ATP1B4Q9UN42 357 aaPredicted RBP29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 265.6 ms