RNA–Protein interactions for RNA: ENST00000452977.5

CTDSP1-205, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-205ENST00000452977 NISCHQ9Y2I1 1504 aa38.3■■■■□ 3.72
CTDSP1-205ENST00000452977 CCDC180Q9P1Z9 1646 aa34.34■■■■□ 3.09
CTDSP1-205ENST00000452977 ABCC9O60706 1549 aa34.02■■■■□ 3.04
CTDSP1-205ENST00000452977 RB1CC1Q8TDY2 1594 aa32.6■■■□□ 2.81
CTDSP1-205ENST00000452977 NACADO15069 1562 aa32.44■■■□□ 2.78
CTDSP1-205ENST00000452977 DCAF8L2P0C7V8 631 aa32.2■■■□□ 2.75
CTDSP1-205ENST00000452977 MYO15BQ96JP2 1530 aa32.1■■■□□ 2.73
CTDSP1-205ENST00000452977 ZCCHC6Q5VYS8 1495 aaKnown RBP31.79■■■□□ 2.68
CTDSP1-205ENST00000452977 DCAF1Q9Y4B6 1507 aa31.74■■■□□ 2.67
CTDSP1-205ENST00000452977 UNC13AQ9UPW8 1703 aa31.7■■■□□ 2.67
CTDSP1-205ENST00000452977 PABPN1Q86U42 306 aaKnown RBP eCLIP31.66■■■□□ 2.66
CTDSP1-205ENST00000452977 DNAJC5BQ9UF47 199 aa31.59■■■□□ 2.65
CTDSP1-205ENST00000452977 BICRAQ9NZM4 1560 aa31.5■■■□□ 2.63
CTDSP1-205ENST00000452977 SHROOM4Q9ULL8 1493 aa31.34■■■□□ 2.61
CTDSP1-205ENST00000452977 SCRIBQ14160 1630 aa31.2■■■□□ 2.58
CTDSP1-205ENST00000452977 EIF4G1Q04637 1599 aaKnown RBP30.78■■■□□ 2.52
CTDSP1-205ENST00000452977 CC2D2AQ9P2K1 1620 aa30.76■■■□□ 2.52
CTDSP1-205ENST00000452977 CECR2Q9BXF3 1484 aa30.68■■■□□ 2.5
CTDSP1-205ENST00000452977 NCAPD3P42695 1498 aa29.9■■■□□ 2.38
CTDSP1-205ENST00000452977 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
CTDSP1-205ENST00000452977 SMARCA2P51531 1590 aa29.82■■■□□ 2.36
CTDSP1-205ENST00000452977 ATAD2BQ9ULI0 1458 aa29.8■■■□□ 2.36
CTDSP1-205ENST00000452977 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
CTDSP1-205ENST00000452977 HMGXB3Q12766 1538 aa29.73■■■□□ 2.35
CTDSP1-205ENST00000452977 PEG3Q9GZU2 1588 aa29.58■■■□□ 2.33
CTDSP1-205ENST00000452977 BAZ1BQ9UIG0 1483 aaKnown RBP29.57■■■□□ 2.32
CTDSP1-205ENST00000452977 ERCC6Q03468 1493 aa29.47■■■□□ 2.31
CTDSP1-205ENST00000452977 MROH2BQ7Z745 1585 aa29.44■■■□□ 2.3
CTDSP1-205ENST00000452977 CUX2O14529 1486 aa29.37■■■□□ 2.29
CTDSP1-205ENST00000452977 NESP48681 1621 aa29.23■■■□□ 2.27
CTDSP1-205ENST00000452977 LAMC3Q9Y6N6 1575 aa29.23■■■□□ 2.27
CTDSP1-205ENST00000452977 WIZO95785 1651 aa29.09■■■□□ 2.25
CTDSP1-205ENST00000452977 PDS5BQ9NTI5 1447 aa29.09■■■□□ 2.25
CTDSP1-205ENST00000452977 DNAJC5Q9H3Z4 198 aa29.02■■■□□ 2.24
CTDSP1-205ENST00000452977 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.23
CTDSP1-205ENST00000452977 THOC2Q8NI27 1593 aaKnown RBP28.96■■■□□ 2.23
CTDSP1-205ENST00000452977 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
CTDSP1-205ENST00000452977 KIF21AQ7Z4S6 1674 aa28.9■■■□□ 2.22
CTDSP1-205ENST00000452977 TOP2AP11388 1531 aaKnown RBP28.84■■■□□ 2.21
CTDSP1-205ENST00000452977 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
CTDSP1-205ENST00000452977 CEP164Q9UPV0 1460 aa28.72■■■□□ 2.19
CTDSP1-205ENST00000452977 CFTRP13569 1480 aa28.71■■■□□ 2.19
CTDSP1-205ENST00000452977 WDR62O43379 1518 aa28.67■■■□□ 2.18
CTDSP1-205ENST00000452977 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
CTDSP1-205ENST00000452977 PRDM2Q13029 1718 aa28.45■■■□□ 2.14
CTDSP1-205ENST00000452977 CCDC88BA6NC98 1476 aa28.45■■■□□ 2.14
CTDSP1-205ENST00000452977 URB2Q14146 1524 aaKnown RBP28.34■■■□□ 2.13
CTDSP1-205ENST00000452977 ABCC8Q09428 1581 aa28.21■■■□□ 2.11
CTDSP1-205ENST00000452977 IFT140Q96RY7 1462 aa28.14■■■□□ 2.09
CTDSP1-205ENST00000452977 TOPBP1Q92547 1522 aa28.12■■■□□ 2.09
CTDSP1-205ENST00000452977 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
CTDSP1-205ENST00000452977 OSCARQ8IYS5 282 aa28.04■■■□□ 2.08
CTDSP1-205ENST00000452977 ZNF608Q9ULD9 1512 aaPredicted RBP27.93■■■□□ 2.06
CTDSP1-205ENST00000452977 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
CTDSP1-205ENST00000452977 POLA1P09884 1462 aaPredicted RBP27.84■■■□□ 2.05
CTDSP1-205ENST00000452977 TARBP1Q13395 1621 aaKnown RBP27.83■■■□□ 2.05
CTDSP1-205ENST00000452977 TRIM41Q8WV44 630 aa27.81■■■□□ 2.04
CTDSP1-205ENST00000452977 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
CTDSP1-205ENST00000452977 SOGA1O94964 1423 aa27.75■■■□□ 2.03
CTDSP1-205ENST00000452977 AQRO60306 1485 aaKnown RBP eCLIP27.73■■■□□ 2.036e-12■■■■■ 82.1
CTDSP1-205ENST00000452977 WDR97A6NE52 1622 aa27.73■■■□□ 2.03
CTDSP1-205ENST00000452977 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.02
CTDSP1-205ENST00000452977 RAD54L2Q9Y4B4 1467 aa27.68■■■□□ 2.02
CTDSP1-205ENST00000452977 CUX1P39880 1505 aa27.67■■■□□ 2.02
CTDSP1-205ENST00000452977 TDRD9Q8NDG6 1382 aaKnown RBP27.6■■■□□ 2.01
CTDSP1-205ENST00000452977 CHD1O14646 1710 aa27.58■■■□□ 2.01
CTDSP1-205ENST00000452977 RIMBP3CA6NJZ7 1639 aa27.56■■■□□ 2
CTDSP1-205ENST00000452977 RIMBP3BA6NNM3 1639 aa27.56■■■□□ 2
CTDSP1-205ENST00000452977 RIMBP3Q9UFD9 1639 aa27.56■■■□□ 2
CTDSP1-205ENST00000452977 FBLN2P98095 1184 aa27.56■■■□□ 2
CTDSP1-205ENST00000452977 ARHGEF11O15085 1522 aa27.53■■■□□ 2
CTDSP1-205ENST00000452977 MAGI1Q96QZ7 1491 aaPredicted RBP27.52■■■□□ 2
CTDSP1-205ENST00000452977 GRIN2BQ13224 1484 aa27.51■■■□□ 2
CTDSP1-205ENST00000452977 SNAPC4Q5SXM2 1469 aa27.51■■□□□ 1.99
CTDSP1-205ENST00000452977 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
CTDSP1-205ENST00000452977 ABCA10Q8WWZ4 1543 aa27.43■■□□□ 1.98
CTDSP1-205ENST00000452977 GAPVD1Q14C86 1478 aa27.43■■□□□ 1.98
CTDSP1-205ENST00000452977 WRNQ14191 1432 aaPredicted RBP eCLIP27.41■■□□□ 1.98
CTDSP1-205ENST00000452977 SYNJ2O15056 1496 aa27.4■■□□□ 1.98
CTDSP1-205ENST00000452977 SYNJ1O43426 1573 aa27.39■■□□□ 1.98
CTDSP1-205ENST00000452977 PBRM1Q86U86 1689 aa27.36■■□□□ 1.97
CTDSP1-205ENST00000452977 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
CTDSP1-205ENST00000452977 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
CTDSP1-205ENST00000452977 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
CTDSP1-205ENST00000452977 CYB5RLQ6IPT4 315 aa27.3■■□□□ 1.96
CTDSP1-205ENST00000452977 CLASP1Q7Z460 1538 aa27.3■■□□□ 1.96
CTDSP1-205ENST00000452977 ARAP1Q96P48 1450 aa27.25■■□□□ 1.95
CTDSP1-205ENST00000452977 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
CTDSP1-205ENST00000452977 ERICH3Q5RHP9 1530 aa27.13■■□□□ 1.93
CTDSP1-205ENST00000452977 ADAMTS12P58397 1594 aa27.13■■□□□ 1.93
CTDSP1-205ENST00000452977 FHAD1B1AJZ9 1412 aa27.11■■□□□ 1.93
CTDSP1-205ENST00000452977 NUP160Q12769 1436 aa27.03■■□□□ 1.92
CTDSP1-205ENST00000452977 TRHP20396 242 aaPredicted RBP26.97■■□□□ 1.91
CTDSP1-205ENST00000452977 CEP170Q5SW79 1584 aa26.97■■□□□ 1.91
CTDSP1-205ENST00000452977 KIF27Q86VH2 1401 aa26.88■■□□□ 1.89
CTDSP1-205ENST00000452977 SHROOM2Q13796 1616 aa26.87■■□□□ 1.89
CTDSP1-205ENST00000452977 CUL7Q14999 1698 aa26.79■■□□□ 1.88
CTDSP1-205ENST00000452977 ERCC6L2Q5T890 1561 aa26.78■■□□□ 1.88
CTDSP1-205ENST00000452977 JPH4Q96JJ6 628 aa26.76■■□□□ 1.87
CTDSP1-205ENST00000452977 PRG4Q92954 1404 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms