RNA–Protein interactions for RNA: ENST00000586788.1

CDC34-203, Transcript of cell division cycle 34, humanhuman

TSL 2

Gene CDC34, Length 900 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34-203ENST00000586788 NISCHQ9Y2I1 1504 aa60.49■■■■■ 7.27
CDC34-203ENST00000586788 CCDC180Q9P1Z9 1646 aa54.11■■■■■ 6.25
CDC34-203ENST00000586788 ABCC9O60706 1549 aa53.82■■■■■ 6.21
CDC34-203ENST00000586788 RB1CC1Q8TDY2 1594 aa51.34■■■■■ 5.81
CDC34-203ENST00000586788 NACADO15069 1562 aa51.08■■■■■ 5.77
CDC34-203ENST00000586788 DCAF8L2P0C7V8 631 aa50.93■■■■■ 5.74
CDC34-203ENST00000586788 MYO15BQ96JP2 1530 aa50.48■■■■■ 5.67
CDC34-203ENST00000586788 DNAJC5BQ9UF47 199 aa50.28■■■■■ 5.64
CDC34-203ENST00000586788 UNC13AQ9UPW8 1703 aa50.25■■■■■ 5.64
CDC34-203ENST00000586788 PABPN1Q86U42 306 aaKnown RBP eCLIP50.19■■■■■ 5.63
CDC34-203ENST00000586788 ZCCHC6Q5VYS8 1495 aaKnown RBP50.19■■■■■ 5.62
CDC34-203ENST00000586788 DCAF1Q9Y4B6 1507 aa49.96■■■■■ 5.59
CDC34-203ENST00000586788 BICRAQ9NZM4 1560 aa49.9■■■■■ 5.58
CDC34-203ENST00000586788 SCRIBQ14160 1630 aa49.34■■■■■ 5.49
CDC34-203ENST00000586788 SHROOM4Q9ULL8 1493 aa49.17■■■■■ 5.46
CDC34-203ENST00000586788 CC2D2AQ9P2K1 1620 aa48.64■■■■■ 5.38
CDC34-203ENST00000586788 EIF4G1Q04637 1599 aaKnown RBP48.61■■■■■ 5.37
CDC34-203ENST00000586788 CECR2Q9BXF3 1484 aa48.43■■■■■ 5.34
CDC34-203ENST00000586788 NCAPD3P42695 1498 aa47.18■■■■■ 5.14
CDC34-203ENST00000586788 SMARCA4P51532 1647 aa47.11■■■■■ 5.13
CDC34-203ENST00000586788 ATAD2BQ9ULI0 1458 aa47.08■■■■■ 5.13
CDC34-203ENST00000586788 SMARCA2P51531 1590 aa46.94■■■■■ 5.1
CDC34-203ENST00000586788 BAZ1AQ9NRL2 1556 aaPredicted RBP46.9■■■■■ 5.1
CDC34-203ENST00000586788 HMGXB3Q12766 1538 aa46.83■■■■■ 5.09
CDC34-203ENST00000586788 PEG3Q9GZU2 1588 aa46.64■■■■■ 5.06
CDC34-203ENST00000586788 MROH2BQ7Z745 1585 aa46.64■■■■■ 5.06
CDC34-203ENST00000586788 BAZ1BQ9UIG0 1483 aaKnown RBP46.61■■■■■ 5.05
CDC34-203ENST00000586788 ERCC6Q03468 1493 aa46.4■■■■■ 5.02
CDC34-203ENST00000586788 NESP48681 1621 aa46.36■■■■■ 5.01
CDC34-203ENST00000586788 CUX2O14529 1486 aa46.21■■■■■ 4.99
CDC34-203ENST00000586788 WIZO95785 1651 aa46.09■■■■■ 4.97
CDC34-203ENST00000586788 LAMC3Q9Y6N6 1575 aa46.04■■■■■ 4.96
CDC34-203ENST00000586788 DNAJC5Q9H3Z4 198 aa45.88■■■■■ 4.94
CDC34-203ENST00000586788 THOC2Q8NI27 1593 aaKnown RBP45.79■■■■■ 4.92
CDC34-203ENST00000586788 RSF1Q96T23 1441 aaPredicted RBP45.78■■■■■ 4.92
CDC34-203ENST00000586788 CADPSQ9ULU8 1353 aa45.76■■■■■ 4.92
CDC34-203ENST00000586788 PDS5BQ9NTI5 1447 aa45.76■■■■■ 4.92
CDC34-203ENST00000586788 KIF21AQ7Z4S6 1674 aa45.75■■■■■ 4.91
CDC34-203ENST00000586788 TOP2AP11388 1531 aaKnown RBP45.49■■■■■ 4.87
CDC34-203ENST00000586788 MRC2Q9UBG0 1479 aa45.35■■■■■ 4.85
CDC34-203ENST00000586788 CFTRP13569 1480 aa45.3■■■■■ 4.84
CDC34-203ENST00000586788 WDR62O43379 1518 aa45.23■■■■■ 4.83
CDC34-203ENST00000586788 CEP164Q9UPV0 1460 aa45.23■■■■■ 4.83
CDC34-203ENST00000586788 FANCD2Q9BXW9 1451 aa45.22■■■■■ 4.83
CDC34-203ENST00000586788 CCDC88BA6NC98 1476 aa45.02■■■■■ 4.8
CDC34-203ENST00000586788 PRDM2Q13029 1718 aa44.87■■■■■ 4.77
CDC34-203ENST00000586788 URB2Q14146 1524 aaKnown RBP44.85■■■■■ 4.77
CDC34-203ENST00000586788 TOPBP1Q92547 1522 aa44.41■■■■■ 4.7
CDC34-203ENST00000586788 IFT140Q96RY7 1462 aa44.32■■■■■ 4.69
CDC34-203ENST00000586788 ABCC8Q09428 1581 aa44.31■■■■■ 4.68
CDC34-203ENST00000586788 DNMBPQ6XZF7 1577 aa44.26■■■■■ 4.68
CDC34-203ENST00000586788 ZNF608Q9ULD9 1512 aaPredicted RBP44.25■■■■■ 4.67
CDC34-203ENST00000586788 OSCARQ8IYS5 282 aa44.2■■■■■ 4.67
CDC34-203ENST00000586788 TARBP1Q13395 1621 aaKnown RBP44.01■■■■■ 4.64
CDC34-203ENST00000586788 SUPT5HO00267 1087 aaKnown RBP44■■■■■ 4.63
CDC34-203ENST00000586788 EIF4G3O43432 1585 aaKnown RBP43.99■■■■■ 4.63
CDC34-203ENST00000586788 POLA1P09884 1462 aaPredicted RBP43.98■■■■■ 4.63
CDC34-203ENST00000586788 TRIM41Q8WV44 630 aa43.98■■■■■ 4.63
CDC34-203ENST00000586788 AQRO60306 1485 aaKnown RBP eCLIP43.9■■■■■ 4.621e-9■■■■■ 37.3
CDC34-203ENST00000586788 RAD54L2Q9Y4B4 1467 aa43.84■■■■■ 4.61
CDC34-203ENST00000586788 SOGA1O94964 1423 aa43.8■■■■■ 4.6
CDC34-203ENST00000586788 CUX1P39880 1505 aa43.78■■■■■ 4.6
CDC34-203ENST00000586788 FGD5Q6ZNL6 1462 aa43.76■■■■■ 4.6
CDC34-203ENST00000586788 TDRD9Q8NDG6 1382 aaKnown RBP43.67■■■■■ 4.58
CDC34-203ENST00000586788 CHD1O14646 1710 aa43.62■■■■■ 4.57
CDC34-203ENST00000586788 RIMBP3CA6NJZ7 1639 aa43.59■■■■■ 4.57
CDC34-203ENST00000586788 RIMBP3BA6NNM3 1639 aa43.59■■■■■ 4.57
CDC34-203ENST00000586788 RIMBP3Q9UFD9 1639 aa43.59■■■■■ 4.57
CDC34-203ENST00000586788 WDR97A6NE52 1622 aa43.53■■■■■ 4.56
CDC34-203ENST00000586788 FBLN2P98095 1184 aa43.52■■■■■ 4.56
CDC34-203ENST00000586788 ARHGEF11O15085 1522 aa43.47■■■■■ 4.55
CDC34-203ENST00000586788 SNAPC4Q5SXM2 1469 aa43.43■■■■■ 4.54
CDC34-203ENST00000586788 GRIN2BQ13224 1484 aa43.36■■■■■ 4.53
CDC34-203ENST00000586788 MAGI1Q96QZ7 1491 aaPredicted RBP43.32■■■■■ 4.52
CDC34-203ENST00000586788 ABCA10Q8WWZ4 1543 aa43.27■■■■■ 4.52
CDC34-203ENST00000586788 GAPVD1Q14C86 1478 aa43.26■■■■■ 4.52
CDC34-203ENST00000586788 CHMP7Q8WUX9 453 aaPredicted RBP43.25■■■■■ 4.51
CDC34-203ENST00000586788 PBRM1Q86U86 1689 aa43.22■■■■■ 4.51
CDC34-203ENST00000586788 ABCA5Q8WWZ7 1642 aa43.18■■■■■ 4.5
CDC34-203ENST00000586788 SYNJ2O15056 1496 aa43.17■■■■■ 4.5
CDC34-203ENST00000586788 CYB5RLQ6IPT4 315 aa43.16■■■■■ 4.5
CDC34-203ENST00000586788 TOP2BQ02880 1626 aa43.15■■■■■ 4.5
CDC34-203ENST00000586788 BIVM-ERCC5R4GMW8 1640 aa43.15■■■■■ 4.5
CDC34-203ENST00000586788 WRNQ14191 1432 aaPredicted RBP eCLIP43.15■■■■■ 4.5
CDC34-203ENST00000586788 SYNJ1O43426 1573 aa43.13■■■■■ 4.5
CDC34-203ENST00000586788 CLASP1Q7Z460 1538 aa43.12■■■■■ 4.49
CDC34-203ENST00000586788 ARAP1Q96P48 1450 aa43.08■■■■■ 4.49
CDC34-203ENST00000586788 ADAMTS12P58397 1594 aa42.82■■■■■ 4.45
CDC34-203ENST00000586788 GRIN2AQ12879 1464 aa42.81■■■■■ 4.44
CDC34-203ENST00000586788 ERICH3Q5RHP9 1530 aa42.72■■■■■ 4.43
CDC34-203ENST00000586788 FHAD1B1AJZ9 1412 aa42.71■■■■■ 4.43
CDC34-203ENST00000586788 NUP160Q12769 1436 aa42.66■■■■■ 4.42
CDC34-203ENST00000586788 CEP170Q5SW79 1584 aa42.65■■■■■ 4.42
CDC34-203ENST00000586788 TRHP20396 242 aaPredicted RBP42.54■■■■■ 4.4
CDC34-203ENST00000586788 ERCC6L2Q5T890 1561 aa42.52■■■■■ 4.4
CDC34-203ENST00000586788 SHROOM2Q13796 1616 aa42.43■■■■■ 4.38
CDC34-203ENST00000586788 KIF27Q86VH2 1401 aa42.31■■■■■ 4.36
CDC34-203ENST00000586788 IGF1RP08069 1367 aa42.3■■■■■ 4.36
CDC34-203ENST00000586788 JPH4Q96JJ6 628 aa42.25■■■■■ 4.35
CDC34-203ENST00000586788 PRG4Q92954 1404 aaPredicted RBP42.22■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms