RNA–Protein interactions for RNA: ENST00000319349.9

ETV4-201, Transcript of ETS variant 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ETV4, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETV4-201ENST00000319349 NISCHQ9Y2I1 1504 aa40.41■■■■■ 4.06
ETV4-201ENST00000319349 CCDC180Q9P1Z9 1646 aa34.61■■■■□ 3.13
ETV4-201ENST00000319349 SHROOM4Q9ULL8 1493 aa34.11■■■■□ 3.05
ETV4-201ENST00000319349 ZCCHC6Q5VYS8 1495 aaKnown RBP34■■■■□ 3.03
ETV4-201ENST00000319349 DCAF8L2P0C7V8 631 aa33.99■■■■□ 3.03
ETV4-201ENST00000319349 SUPT5HO00267 1087 aaKnown RBP33.12■■■□□ 2.89
ETV4-201ENST00000319349 DCAF1Q9Y4B6 1507 aa33.07■■■□□ 2.88
ETV4-201ENST00000319349 ABCC9O60706 1549 aa32.88■■■□□ 2.85
ETV4-201ENST00000319349 SCRIBQ14160 1630 aa32.45■■■□□ 2.79
ETV4-201ENST00000319349 MYO15BQ96JP2 1530 aa32.37■■■□□ 2.77
ETV4-201ENST00000319349 NACADO15069 1562 aa32.22■■■□□ 2.75
ETV4-201ENST00000319349 RB1CC1Q8TDY2 1594 aa31.88■■■□□ 2.69
ETV4-201ENST00000319349 CHIC1Q5VXU3 224 aa31.74■■■□□ 2.67
ETV4-201ENST00000319349 RSF1Q96T23 1441 aaPredicted RBP31.73■■■□□ 2.67
ETV4-201ENST00000319349 CECR2Q9BXF3 1484 aa31.63■■■□□ 2.65
ETV4-201ENST00000319349 MROH2BQ7Z745 1585 aa31.41■■■□□ 2.62
ETV4-201ENST00000319349 PABPN1Q86U42 306 aaKnown RBP eCLIP31.36■■■□□ 2.618e-7■■□□□ 12.6
ETV4-201ENST00000319349 UNC13AQ9UPW8 1703 aa31.33■■■□□ 2.61
ETV4-201ENST00000319349 HRCP23327 699 aa31.28■■■□□ 2.6
ETV4-201ENST00000319349 WIZO95785 1651 aa31.2■■■□□ 2.58
ETV4-201ENST00000319349 BAZ1AQ9NRL2 1556 aaPredicted RBP31.08■■■□□ 2.57
ETV4-201ENST00000319349 BICRAQ9NZM4 1560 aa31.01■■■□□ 2.55
ETV4-201ENST00000319349 SMARCA4P51532 1647 aa30.91■■■□□ 2.54
ETV4-201ENST00000319349 TRIM41Q8WV44 630 aa30.87■■■□□ 2.53
ETV4-201ENST00000319349 PCGF6Q9BYE7 350 aa30.87■■■□□ 2.53
ETV4-201ENST00000319349 LOC105371045A0A1W2PR82 267 aa30.85■■■□□ 2.53
ETV4-201ENST00000319349 FAM9AQ8IZU1 332 aaPredicted RBP30.66■■■□□ 2.5
ETV4-201ENST00000319349 TOP2AP11388 1531 aaKnown RBP30.66■■■□□ 2.5
ETV4-201ENST00000319349 CCDC88BA6NC98 1476 aa30.57■■■□□ 2.48
ETV4-201ENST00000319349 EHMT2Q96KQ7 1210 aa30.5■■■□□ 2.47
ETV4-201ENST00000319349 SMARCA2P51531 1590 aa30.47■■■□□ 2.47
ETV4-201ENST00000319349 TRIM26Q12899 539 aaPredicted RBP30.44■■■□□ 2.46
ETV4-201ENST00000319349 EIF4G1Q04637 1599 aaKnown RBP30.34■■■□□ 2.45
ETV4-201ENST00000319349 ATAD2BQ9ULI0 1458 aa30.33■■■□□ 2.45
ETV4-201ENST00000319349 PPARGC1BQ86YN6 1023 aaKnown RBP30.29■■■□□ 2.44
ETV4-201ENST00000319349 PEG3Q9GZU2 1588 aa30.29■■■□□ 2.44
ETV4-201ENST00000319349 ABCC8Q09428 1581 aa30.28■■■□□ 2.44
ETV4-201ENST00000319349 BAZ1BQ9UIG0 1483 aaKnown RBP30.24■■■□□ 2.43
ETV4-201ENST00000319349 ZEB1P37275 1124 aaPredicted RBP30.04■■■□□ 2.4
ETV4-201ENST00000319349 SOGA1O94964 1423 aa29.87■■■□□ 2.37
ETV4-201ENST00000319349 WRNQ14191 1432 aaPredicted RBP eCLIP29.85■■■□□ 2.37
ETV4-201ENST00000319349 NCAPD3P42695 1498 aa29.85■■■□□ 2.37
ETV4-201ENST00000319349 RUSC2Q8N2Y8 1516 aa29.76■■■□□ 2.35
ETV4-201ENST00000319349 HMGXB3Q12766 1538 aa29.74■■■□□ 2.35
ETV4-201ENST00000319349 SYNJ1O43426 1573 aa29.69■■■□□ 2.34
ETV4-201ENST00000319349 CSRNP3Q8WYN3 585 aa29.64■■■□□ 2.34
ETV4-201ENST00000319349 UBTFP17480 764 aaKnown RBP29.55■■■□□ 2.32
ETV4-201ENST00000319349 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
ETV4-201ENST00000319349 EEA1Q15075 1411 aa29.48■■■□□ 2.31
ETV4-201ENST00000319349 CFTRP13569 1480 aa29.41■■■□□ 2.3
ETV4-201ENST00000319349 TOP2BQ02880 1626 aa29.35■■■□□ 2.29
ETV4-201ENST00000319349 CEP162Q5TB80 1403 aa29.35■■■□□ 2.29
ETV4-201ENST00000319349 TNIKQ9UKE5 1360 aa29.32■■■□□ 2.28
ETV4-201ENST00000319349 TTBK1Q5TCY1 1321 aaPredicted RBP29.3■■■□□ 2.28
ETV4-201ENST00000319349 GOLGA3Q08378 1498 aa29.3■■■□□ 2.28
ETV4-201ENST00000319349 CUX1P39880 1505 aa29.28■■■□□ 2.28
ETV4-201ENST00000319349 CADPSQ9ULU8 1353 aa29.27■■■□□ 2.28
ETV4-201ENST00000319349 RANGAP1P46060 587 aaPredicted RBP29.26■■■□□ 2.28
ETV4-201ENST00000319349 BIVM-ERCC5R4GMW8 1640 aa29.22■■■□□ 2.27
ETV4-201ENST00000319349 CEP164Q9UPV0 1460 aa29.21■■■□□ 2.27
ETV4-201ENST00000319349 RAPGEF2Q9Y4G8 1499 aa29.15■■■□□ 2.26
ETV4-201ENST00000319349 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
ETV4-201ENST00000319349 KIF21BO75037 1637 aa29.09■■■□□ 2.25
ETV4-201ENST00000319349 NESP48681 1621 aa29.06■■■□□ 2.24
ETV4-201ENST00000319349 PRDM2Q13029 1718 aa29.01■■■□□ 2.23
ETV4-201ENST00000319349 KIF27Q86VH2 1401 aa28.99■■■□□ 2.23
ETV4-201ENST00000319349 FANCD2Q9BXW9 1451 aa28.99■■■□□ 2.23
ETV4-201ENST00000319349 CLIP1P30622 1438 aa28.98■■■□□ 2.23
ETV4-201ENST00000319349 CCER1Q8TC90 406 aaPredicted RBP28.98■■■□□ 2.23
ETV4-201ENST00000319349 PELP1Q8IZL8 1130 aaKnown RBP28.95■■■□□ 2.22
ETV4-201ENST00000319349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.94■■■□□ 2.22
ETV4-201ENST00000319349 FGD5Q6ZNL6 1462 aa28.9■■■□□ 2.22
ETV4-201ENST00000319349 CUX2O14529 1486 aa28.9■■■□□ 2.22
ETV4-201ENST00000319349 PRXQ9BXM0 1461 aa28.89■■■□□ 2.21
ETV4-201ENST00000319349 SCAF1Q9H7N4 1312 aaKnown RBP28.88■■■□□ 2.21
ETV4-201ENST00000319349 ERICH3Q5RHP9 1530 aa28.76■■■□□ 2.19
ETV4-201ENST00000319349 IGF1RP08069 1367 aa28.75■■■□□ 2.19
ETV4-201ENST00000319349 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
ETV4-201ENST00000319349 VPS8Q8N3P4 1428 aa28.71■■■□□ 2.19
ETV4-201ENST00000319349 APLP2Q06481 763 aa28.7■■■□□ 2.18
ETV4-201ENST00000319349 TOPBP1Q92547 1522 aa28.7■■■□□ 2.18
ETV4-201ENST00000319349 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
ETV4-201ENST00000319349 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
ETV4-201ENST00000319349 POLA1P09884 1462 aaPredicted RBP28.65■■■□□ 2.18
ETV4-201ENST00000319349 CARMIL1Q5VZK9 1371 aa28.63■■■□□ 2.17
ETV4-201ENST00000319349 ACIN1Q9UKV3 1341 aaKnown RBP28.62■■■□□ 2.17
ETV4-201ENST00000319349 DIEXFQ68CQ4 756 aaKnown RBP28.61■■■□□ 2.17
ETV4-201ENST00000319349 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
ETV4-201ENST00000319349 PDS5BQ9NTI5 1447 aa28.58■■■□□ 2.17
ETV4-201ENST00000319349 ARAP1Q96P48 1450 aa28.55■■■□□ 2.16
ETV4-201ENST00000319349 ABCA10Q8WWZ4 1543 aa28.49■■■□□ 2.15
ETV4-201ENST00000319349 TDRD9Q8NDG6 1382 aaKnown RBP28.48■■■□□ 2.15
ETV4-201ENST00000319349 CENPBP07199 599 aaPredicted RBP28.48■■■□□ 2.15
ETV4-201ENST00000319349 KIF21AQ7Z4S6 1674 aa28.46■■■□□ 2.15
ETV4-201ENST00000319349 HNRNPUL2Q1KMD3 747 aaKnown RBP28.46■■■□□ 2.15
ETV4-201ENST00000319349 ARHGAP35Q9NRY4 1499 aa28.45■■■□□ 2.14
ETV4-201ENST00000319349 NEUROD1Q13562 356 aa28.44■■■□□ 2.14
ETV4-201ENST00000319349 P3H3Q8IVL6 736 aa28.43■■■□□ 2.14
ETV4-201ENST00000319349 KANK4Q5T7N3 995 aaPredicted RBP28.41■■■□□ 2.14
ETV4-201ENST00000319349 ZNF316A6NFI3 1004 aaPredicted RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms