RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 NISCHQ9Y2I1 1504 aa49.16■■■■■ 5.46
BRAF-202ENST00000469930 CCDC180Q9P1Z9 1646 aa43.38■■■■■ 4.54
BRAF-202ENST00000469930 ABCC9O60706 1549 aa41.52■■■■■ 4.24
BRAF-202ENST00000469930 ZCCHC6Q5VYS8 1495 aaKnown RBP41.12■■■■■ 4.17
BRAF-202ENST00000469930 DCAF1Q9Y4B6 1507 aa40.83■■■■■ 4.13
BRAF-202ENST00000469930 MYO15BQ96JP2 1530 aa40.74■■■■■ 4.11
BRAF-202ENST00000469930 NACADO15069 1562 aa40.61■■■■■ 4.09
BRAF-202ENST00000469930 DCAF8L2P0C7V8 631 aa40.54■■■■■ 4.08
BRAF-202ENST00000469930 RB1CC1Q8TDY2 1594 aa40.41■■■■■ 4.06
BRAF-202ENST00000469930 SCRIBQ14160 1630 aa39.47■■■■□ 3.91
BRAF-202ENST00000469930 UNC13AQ9UPW8 1703 aa39.43■■■■□ 3.9
BRAF-202ENST00000469930 BICRAQ9NZM4 1560 aa39.15■■■■□ 3.86
BRAF-202ENST00000469930 SHROOM4Q9ULL8 1493 aa39.08■■■■□ 3.85
BRAF-202ENST00000469930 PABPN1Q86U42 306 aaKnown RBP eCLIP38.91■■■■□ 3.82
BRAF-202ENST00000469930 CECR2Q9BXF3 1484 aa38.14■■■■□ 3.7
BRAF-202ENST00000469930 BAZ1AQ9NRL2 1556 aaPredicted RBP38.05■■■■□ 3.68
BRAF-202ENST00000469930 EIF4G1Q04637 1599 aaKnown RBP38.03■■■■□ 3.68
BRAF-202ENST00000469930 SMARCA4P51532 1647 aa37.94■■■■□ 3.66
BRAF-202ENST00000469930 MROH2BQ7Z745 1585 aa37.85■■■■□ 3.65
BRAF-202ENST00000469930 RSF1Q96T23 1441 aaPredicted RBP37.74■■■■□ 3.63
BRAF-202ENST00000469930 PEG3Q9GZU2 1588 aa37.67■■■■□ 3.62
BRAF-202ENST00000469930 CC2D2AQ9P2K1 1620 aa37.65■■■■□ 3.62
BRAF-202ENST00000469930 SMARCA2P51531 1590 aa37.57■■■■□ 3.6
BRAF-202ENST00000469930 ATAD2BQ9ULI0 1458 aa37.57■■■■□ 3.6
BRAF-202ENST00000469930 NCAPD3P42695 1498 aa37.49■■■■□ 3.59
BRAF-202ENST00000469930 WIZO95785 1651 aa37.44■■■■□ 3.58
BRAF-202ENST00000469930 DNAJC5BQ9UF47 199 aa37.43■■■■□ 3.58
BRAF-202ENST00000469930 HMGXB3Q12766 1538 aa37.35■■■■□ 3.57
BRAF-202ENST00000469930 BAZ1BQ9UIG0 1483 aaKnown RBP37.25■■■■□ 3.55
BRAF-202ENST00000469930 SUPT5HO00267 1087 aaKnown RBP37.22■■■■□ 3.55
BRAF-202ENST00000469930 TOP2AP11388 1531 aaKnown RBP37.16■■■■□ 3.54
BRAF-202ENST00000469930 CCDC88BA6NC98 1476 aa36.71■■■■□ 3.47
BRAF-202ENST00000469930 CADPSQ9ULU8 1353 aa36.4■■■■□ 3.42
BRAF-202ENST00000469930 CFTRP13569 1480 aa36.36■■■■□ 3.41
BRAF-202ENST00000469930 LAMC3Q9Y6N6 1575 aa36.32■■■■□ 3.41
BRAF-202ENST00000469930 NESP48681 1621 aa36.16■■■■□ 3.38
BRAF-202ENST00000469930 PRDM2Q13029 1718 aa36.09■■■■□ 3.37
BRAF-202ENST00000469930 PDS5BQ9NTI5 1447 aa36.05■■■■□ 3.36
BRAF-202ENST00000469930 FANCD2Q9BXW9 1451 aa35.92■■■■□ 3.34
BRAF-202ENST00000469930 CEP164Q9UPV0 1460 aa35.8■■■■□ 3.32
BRAF-202ENST00000469930 KIF21AQ7Z4S6 1674 aa35.77■■■■□ 3.32
BRAF-202ENST00000469930 ERCC6Q03468 1493 aa35.73■■■■□ 3.31
BRAF-202ENST00000469930 MRC2Q9UBG0 1479 aa35.6■■■■□ 3.29
BRAF-202ENST00000469930 ABCC8Q09428 1581 aa35.59■■■■□ 3.29
BRAF-202ENST00000469930 WRNQ14191 1432 aaPredicted RBP eCLIP35.54■■■■□ 3.28
BRAF-202ENST00000469930 THOC2Q8NI27 1593 aaKnown RBP35.51■■■■□ 3.28
BRAF-202ENST00000469930 URB2Q14146 1524 aaKnown RBP35.5■■■■□ 3.27
BRAF-202ENST00000469930 DNMBPQ6XZF7 1577 aa35.48■■■■□ 3.27
BRAF-202ENST00000469930 WDR62O43379 1518 aa35.47■■■■□ 3.27
BRAF-202ENST00000469930 CUX1P39880 1505 aa35.46■■■■□ 3.27
BRAF-202ENST00000469930 TOPBP1Q92547 1522 aa35.45■■■■□ 3.27
BRAF-202ENST00000469930 TOP2BQ02880 1626 aa35.4■■■■□ 3.26
BRAF-202ENST00000469930 BIVM-ERCC5R4GMW8 1640 aa35.39■■■■□ 3.26
BRAF-202ENST00000469930 SYNJ1O43426 1573 aa35.37■■■■□ 3.25
BRAF-202ENST00000469930 CHIC1Q5VXU3 224 aa35.33■■■■□ 3.25
BRAF-202ENST00000469930 TRIM41Q8WV44 630 aa35.21■■■■□ 3.23
BRAF-202ENST00000469930 CUX2O14529 1486 aa35.2■■■■□ 3.23
BRAF-202ENST00000469930 FGD5Q6ZNL6 1462 aa35.2■■■■□ 3.23
BRAF-202ENST00000469930 POLA1P09884 1462 aaPredicted RBP35.19■■■■□ 3.22
BRAF-202ENST00000469930 SOGA1O94964 1423 aa35.07■■■■□ 3.21
BRAF-202ENST00000469930 IFT140Q96RY7 1462 aa35.06■■■■□ 3.2
BRAF-202ENST00000469930 TARBP1Q13395 1621 aaKnown RBP35.01■■■■□ 3.19
BRAF-202ENST00000469930 ABCA10Q8WWZ4 1543 aa34.98■■■■□ 3.19
BRAF-202ENST00000469930 RAD54L2Q9Y4B4 1467 aa34.97■■■■□ 3.19
BRAF-202ENST00000469930 WDR97A6NE52 1622 aa34.9■■■■□ 3.18
BRAF-202ENST00000469930 KIF27Q86VH2 1401 aa34.76■■■■□ 3.16
BRAF-202ENST00000469930 ZNF608Q9ULD9 1512 aaPredicted RBP34.74■■■■□ 3.15
BRAF-202ENST00000469930 ABCA5Q8WWZ7 1642 aa34.73■■■■□ 3.15
BRAF-202ENST00000469930 TDRD9Q8NDG6 1382 aaKnown RBP34.72■■■■□ 3.15
BRAF-202ENST00000469930 EEA1Q15075 1411 aa34.7■■■■□ 3.15
BRAF-202ENST00000469930 GAPVD1Q14C86 1478 aa34.68■■■■□ 3.14
BRAF-202ENST00000469930 AQRO60306 1485 aaKnown RBP eCLIP34.66■■■■□ 3.14
BRAF-202ENST00000469930 EIF4G3O43432 1585 aaKnown RBP34.65■■■■□ 3.14
BRAF-202ENST00000469930 RUSC2Q8N2Y8 1516 aa34.6■■■■□ 3.13
BRAF-202ENST00000469930 DNAJC5Q9H3Z4 198 aa34.6■■■■□ 3.13
BRAF-202ENST00000469930 GRIN2BQ13224 1484 aa34.58■■■■□ 3.13
BRAF-202ENST00000469930 ERICH3Q5RHP9 1530 aa34.58■■■■□ 3.13
BRAF-202ENST00000469930 IGF1RP08069 1367 aa34.54■■■■□ 3.12
BRAF-202ENST00000469930 PBRM1Q86U86 1689 aa34.5■■■■□ 3.11
BRAF-202ENST00000469930 CSRNP3Q8WYN3 585 aa34.46■■■■□ 3.11
BRAF-202ENST00000469930 MAGI1Q96QZ7 1491 aaPredicted RBP34.43■■■■□ 3.1
BRAF-202ENST00000469930 CUL7Q14999 1698 aa34.38■■■■□ 3.09
BRAF-202ENST00000469930 SNAPC4Q5SXM2 1469 aa34.36■■■■□ 3.09
BRAF-202ENST00000469930 FHAD1B1AJZ9 1412 aa34.34■■■■□ 3.09
BRAF-202ENST00000469930 PRXQ9BXM0 1461 aa34.33■■■■□ 3.09
BRAF-202ENST00000469930 CARMIL1Q5VZK9 1371 aa34.33■■■■□ 3.09
BRAF-202ENST00000469930 FAM9AQ8IZU1 332 aaPredicted RBP34.32■■■■□ 3.08
BRAF-202ENST00000469930 ADAMTS12P58397 1594 aa34.32■■■■□ 3.08
BRAF-202ENST00000469930 SYNJ2O15056 1496 aa34.27■■■■□ 3.08
BRAF-202ENST00000469930 RAPGEF2Q9Y4G8 1499 aa34.21■■■■□ 3.07
BRAF-202ENST00000469930 KIF21BO75037 1637 aa34.21■■■■□ 3.07
BRAF-202ENST00000469930 CHMP7Q8WUX9 453 aaPredicted RBP34.14■■■■□ 3.06
BRAF-202ENST00000469930 GRIN2AQ12879 1464 aa34.12■■■■□ 3.05
BRAF-202ENST00000469930 GOLGA3Q08378 1498 aa34.05■■■■□ 3.04
BRAF-202ENST00000469930 CHD1O14646 1710 aa34.03■■■■□ 3.04
BRAF-202ENST00000469930 FBLN2P98095 1184 aa34■■■■□ 3.03
BRAF-202ENST00000469930 NUP160Q12769 1436 aa33.98■■■■□ 3.03
BRAF-202ENST00000469930 CEP170Q5SW79 1584 aa33.89■■■■□ 3.02
BRAF-202ENST00000469930 KIAA0586Q9BVV6 1533 aa33.85■■■■□ 3.01
BRAF-202ENST00000469930 OSCARQ8IYS5 282 aa33.84■■■■□ 3.01
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