RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 NISCHQ9Y2I1 1504 aa42.87■■■■■ 4.45
H3F3B-207ENST00000589417 CCDC180Q9P1Z9 1646 aa38.08■■■■□ 3.69
H3F3B-207ENST00000589417 ABCC9O60706 1549 aa37.3■■■■□ 3.56
H3F3B-207ENST00000589417 NACADO15069 1562 aa35.89■■■■□ 3.34
H3F3B-207ENST00000589417 RB1CC1Q8TDY2 1594 aa35.89■■■■□ 3.34
H3F3B-207ENST00000589417 MYO15BQ96JP2 1530 aa35.77■■■■□ 3.32
H3F3B-207ENST00000589417 DCAF8L2P0C7V8 631 aa35.73■■■■□ 3.31
H3F3B-207ENST00000589417 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
H3F3B-207ENST00000589417 DCAF1Q9Y4B6 1507 aa35.55■■■■□ 3.28
H3F3B-207ENST00000589417 UNC13AQ9UPW8 1703 aa34.93■■■■□ 3.18
H3F3B-207ENST00000589417 PABPN1Q86U42 306 aaKnown RBP eCLIP34.88■■■■□ 3.17
H3F3B-207ENST00000589417 BICRAQ9NZM4 1560 aa34.83■■■■□ 3.17
H3F3B-207ENST00000589417 SCRIBQ14160 1630 aa34.64■■■■□ 3.14
H3F3B-207ENST00000589417 SHROOM4Q9ULL8 1493 aa34.57■■■■□ 3.12
H3F3B-207ENST00000589417 DNAJC5BQ9UF47 199 aa34.42■■■■□ 3.1
H3F3B-207ENST00000589417 EIF4G1Q04637 1599 aaKnown RBP33.89■■■■□ 3.02
H3F3B-207ENST00000589417 CC2D2AQ9P2K1 1620 aa33.75■■■□□ 2.99
H3F3B-207ENST00000589417 CECR2Q9BXF3 1484 aa33.58■■■□□ 2.97
H3F3B-207ENST00000589417 BAZ1AQ9NRL2 1556 aaPredicted RBP33.21■■■□□ 2.91
H3F3B-207ENST00000589417 SMARCA4P51532 1647 aa33.2■■■□□ 2.91
H3F3B-207ENST00000589417 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
H3F3B-207ENST00000589417 ATAD2BQ9ULI0 1458 aa33.14■■■□□ 2.9
H3F3B-207ENST00000589417 SMARCA2P51531 1590 aa33.06■■■□□ 2.88
H3F3B-207ENST00000589417 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
H3F3B-207ENST00000589417 PEG3Q9GZU2 1588 aa33■■■□□ 2.87
H3F3B-207ENST00000589417 HMGXB3Q12766 1538 aa32.94■■■□□ 2.86
H3F3B-207ENST00000589417 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
H3F3B-207ENST00000589417 RSF1Q96T23 1441 aaPredicted RBP32.66■■■□□ 2.82
H3F3B-207ENST00000589417 WIZO95785 1651 aa32.56■■■□□ 2.8
H3F3B-207ENST00000589417 TOP2AP11388 1531 aaKnown RBP32.28■■■□□ 2.76
H3F3B-207ENST00000589417 NESP48681 1621 aa32.26■■■□□ 2.76
H3F3B-207ENST00000589417 LAMC3Q9Y6N6 1575 aa32.23■■■□□ 2.75
H3F3B-207ENST00000589417 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
H3F3B-207ENST00000589417 ERCC6Q03468 1493 aa32.15■■■□□ 2.74
H3F3B-207ENST00000589417 PDS5BQ9NTI5 1447 aa32.06■■■□□ 2.72
H3F3B-207ENST00000589417 CFTRP13569 1480 aa31.98■■■□□ 2.71
H3F3B-207ENST00000589417 CCDC88BA6NC98 1476 aa31.94■■■□□ 2.7
H3F3B-207ENST00000589417 CUX2O14529 1486 aa31.94■■■□□ 2.7
H3F3B-207ENST00000589417 KIF21AQ7Z4S6 1674 aa31.79■■■□□ 2.68
H3F3B-207ENST00000589417 THOC2Q8NI27 1593 aaKnown RBP31.78■■■□□ 2.68
H3F3B-207ENST00000589417 FANCD2Q9BXW9 1451 aa31.75■■■□□ 2.67
H3F3B-207ENST00000589417 CEP164Q9UPV0 1460 aa31.7■■■□□ 2.66
H3F3B-207ENST00000589417 MRC2Q9UBG0 1479 aa31.68■■■□□ 2.66
H3F3B-207ENST00000589417 SUPT5HO00267 1087 aaKnown RBP31.65■■■□□ 2.66
H3F3B-207ENST00000589417 WDR62O43379 1518 aa31.59■■■□□ 2.65
H3F3B-207ENST00000589417 PRDM2Q13029 1718 aa31.51■■■□□ 2.63
H3F3B-207ENST00000589417 URB2Q14146 1524 aaKnown RBP31.44■■■□□ 2.62
H3F3B-207ENST00000589417 ABCC8Q09428 1581 aa31.3■■■□□ 2.6
H3F3B-207ENST00000589417 TOPBP1Q92547 1522 aa31.23■■■□□ 2.59
H3F3B-207ENST00000589417 DNMBPQ6XZF7 1577 aa31.17■■■□□ 2.58
H3F3B-207ENST00000589417 DNAJC5Q9H3Z4 198 aa31.11■■■□□ 2.57
H3F3B-207ENST00000589417 IFT140Q96RY7 1462 aa31.09■■■□□ 2.57
H3F3B-207ENST00000589417 POLA1P09884 1462 aaPredicted RBP30.97■■■□□ 2.55
H3F3B-207ENST00000589417 CUX1P39880 1505 aa30.95■■■□□ 2.55
H3F3B-207ENST00000589417 ZNF608Q9ULD9 1512 aaPredicted RBP30.9■■■□□ 2.54
H3F3B-207ENST00000589417 TARBP1Q13395 1621 aaKnown RBP30.88■■■□□ 2.53
H3F3B-207ENST00000589417 SOGA1O94964 1423 aa30.86■■■□□ 2.53
H3F3B-207ENST00000589417 FGD5Q6ZNL6 1462 aa30.85■■■□□ 2.53
H3F3B-207ENST00000589417 RAD54L2Q9Y4B4 1467 aa30.81■■■□□ 2.52
H3F3B-207ENST00000589417 WRNQ14191 1432 aaPredicted RBP eCLIP30.76■■■□□ 2.517e-8■□□□□ 11.3
H3F3B-207ENST00000589417 AQRO60306 1485 aaKnown RBP eCLIP30.73■■■□□ 2.512e-9■■■■□ 20.2
H3F3B-207ENST00000589417 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
H3F3B-207ENST00000589417 WDR97A6NE52 1622 aa30.69■■■□□ 2.5
H3F3B-207ENST00000589417 TDRD9Q8NDG6 1382 aaKnown RBP30.67■■■□□ 2.5
H3F3B-207ENST00000589417 TOP2BQ02880 1626 aa30.67■■■□□ 2.5
H3F3B-207ENST00000589417 OSCARQ8IYS5 282 aa30.64■■■□□ 2.5
H3F3B-207ENST00000589417 BIVM-ERCC5R4GMW8 1640 aa30.63■■■□□ 2.49
H3F3B-207ENST00000589417 ABCA10Q8WWZ4 1543 aa30.62■■■□□ 2.49
H3F3B-207ENST00000589417 SYNJ1O43426 1573 aa30.61■■■□□ 2.49
H3F3B-207ENST00000589417 GRIN2BQ13224 1484 aa30.5■■■□□ 2.47
H3F3B-207ENST00000589417 GAPVD1Q14C86 1478 aa30.48■■■□□ 2.47
H3F3B-207ENST00000589417 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
H3F3B-207ENST00000589417 ABCA5Q8WWZ7 1642 aa30.42■■■□□ 2.46
H3F3B-207ENST00000589417 SNAPC4Q5SXM2 1469 aa30.42■■■□□ 2.46
H3F3B-207ENST00000589417 FBLN2P98095 1184 aa30.32■■■□□ 2.44
H3F3B-207ENST00000589417 SYNJ2O15056 1496 aa30.31■■■□□ 2.44
H3F3B-207ENST00000589417 CHMP7Q8WUX9 453 aaPredicted RBP30.31■■■□□ 2.44
H3F3B-207ENST00000589417 PBRM1Q86U86 1689 aa30.27■■■□□ 2.44
H3F3B-207ENST00000589417 CHD1O14646 1710 aa30.27■■■□□ 2.44
H3F3B-207ENST00000589417 ERICH3Q5RHP9 1530 aa30.23■■■□□ 2.43
H3F3B-207ENST00000589417 FHAD1B1AJZ9 1412 aa30.17■■■□□ 2.42
H3F3B-207ENST00000589417 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
H3F3B-207ENST00000589417 ADAMTS12P58397 1594 aa30.12■■■□□ 2.41
H3F3B-207ENST00000589417 CLASP1Q7Z460 1538 aa30.1■■■□□ 2.41
H3F3B-207ENST00000589417 GRIN2AQ12879 1464 aa30.09■■■□□ 2.41
H3F3B-207ENST00000589417 IGF1RP08069 1367 aa30.08■■■□□ 2.41
H3F3B-207ENST00000589417 ARHGEF11O15085 1522 aa30.05■■■□□ 2.4
H3F3B-207ENST00000589417 NUP160Q12769 1436 aa30.02■■■□□ 2.4
H3F3B-207ENST00000589417 RIMBP3CA6NJZ7 1639 aa30.01■■■□□ 2.39
H3F3B-207ENST00000589417 RIMBP3BA6NNM3 1639 aa30.01■■■□□ 2.39
H3F3B-207ENST00000589417 RIMBP3Q9UFD9 1639 aa30.01■■■□□ 2.39
H3F3B-207ENST00000589417 TRIM41Q8WV44 630 aa29.97■■■□□ 2.39
H3F3B-207ENST00000589417 CEP170Q5SW79 1584 aa29.9■■■□□ 2.38
H3F3B-207ENST00000589417 CUL7Q14999 1698 aa29.86■■■□□ 2.37
H3F3B-207ENST00000589417 CARMIL1Q5VZK9 1371 aa29.86■■■□□ 2.37
H3F3B-207ENST00000589417 ARAP1Q96P48 1450 aa29.81■■■□□ 2.36
H3F3B-207ENST00000589417 CYB5RLQ6IPT4 315 aa29.79■■■□□ 2.36
H3F3B-207ENST00000589417 RUSC2Q8N2Y8 1516 aa29.78■■■□□ 2.36
H3F3B-207ENST00000589417 SHROOM2Q13796 1616 aa29.74■■■□□ 2.35
H3F3B-207ENST00000589417 JPH4Q96JJ6 628 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms