RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.23
H3F3B-212ENST00000592643 CCDC180Q9P1Z9 1646 aa25.59■■□□□ 1.69
H3F3B-212ENST00000592643 ABCC9O60706 1549 aa25.11■■□□□ 1.61
H3F3B-212ENST00000592643 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.46
H3F3B-212ENST00000592643 NACADO15069 1562 aa24.09■■□□□ 1.45
H3F3B-212ENST00000592643 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
H3F3B-212ENST00000592643 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.44
H3F3B-212ENST00000592643 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
H3F3B-212ENST00000592643 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
H3F3B-212ENST00000592643 UNC13AQ9UPW8 1703 aa23.56■■□□□ 1.36
H3F3B-212ENST00000592643 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
H3F3B-212ENST00000592643 BICRAQ9NZM4 1560 aa23.5■■□□□ 1.35
H3F3B-212ENST00000592643 SCRIBQ14160 1630 aa23.43■■□□□ 1.34
H3F3B-212ENST00000592643 DNAJC5BQ9UF47 199 aa23.15■■□□□ 1.3
H3F3B-212ENST00000592643 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
H3F3B-212ENST00000592643 AEBP2Q6ZN18 517 aaPredicted RBP23.06■■□□□ 1.28
H3F3B-212ENST00000592643 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
H3F3B-212ENST00000592643 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
H3F3B-212ENST00000592643 CECR2Q9BXF3 1484 aa22.62■■□□□ 1.21
H3F3B-212ENST00000592643 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
H3F3B-212ENST00000592643 BAZ1AQ9NRL2 1556 aaPredicted RBP22.37■■□□□ 1.17
H3F3B-212ENST00000592643 MROH2BQ7Z745 1585 aa22.36■■□□□ 1.17
H3F3B-212ENST00000592643 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
H3F3B-212ENST00000592643 NCAPD3P42695 1498 aa22.3■■□□□ 1.16
H3F3B-212ENST00000592643 PEG3Q9GZU2 1588 aa22.22■■□□□ 1.15
H3F3B-212ENST00000592643 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
H3F3B-212ENST00000592643 HMGXB3Q12766 1538 aa22.15■■□□□ 1.14
H3F3B-212ENST00000592643 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
H3F3B-212ENST00000592643 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
H3F3B-212ENST00000592643 WIZO95785 1651 aa22.06■■□□□ 1.12
H3F3B-212ENST00000592643 TOP2AP11388 1531 aaKnown RBP21.81■■□□□ 1.08
H3F3B-212ENST00000592643 NESP48681 1621 aa21.79■■□□□ 1.08
H3F3B-212ENST00000592643 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.06
H3F3B-212ENST00000592643 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
H3F3B-212ENST00000592643 CCDC88BA6NC98 1476 aa21.61■■□□□ 1.05
H3F3B-212ENST00000592643 CFTRP13569 1480 aa21.54■■□□□ 1.04
H3F3B-212ENST00000592643 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
H3F3B-212ENST00000592643 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
H3F3B-212ENST00000592643 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
H3F3B-212ENST00000592643 PDS5BQ9NTI5 1447 aa21.47■■□□□ 1.03
H3F3B-212ENST00000592643 KIF21AQ7Z4S6 1674 aa21.43■■□□□ 1.02
H3F3B-212ENST00000592643 THOC2Q8NI27 1593 aaKnown RBP21.39■■□□□ 1.01
H3F3B-212ENST00000592643 FANCD2Q9BXW9 1451 aa21.38■■□□□ 1.01
H3F3B-212ENST00000592643 CUX2O14529 1486 aa21.32■■□□□ 1
H3F3B-212ENST00000592643 CEP164Q9UPV0 1460 aa21.31■■□□□ 1
H3F3B-212ENST00000592643 MRC2Q9UBG0 1479 aa21.29■■□□□ 1
H3F3B-212ENST00000592643 WDR62O43379 1518 aa21.24■□□□□ 0.99
H3F3B-212ENST00000592643 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
H3F3B-212ENST00000592643 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
H3F3B-212ENST00000592643 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
H3F3B-212ENST00000592643 DNMBPQ6XZF7 1577 aa20.99■□□□□ 0.95
H3F3B-212ENST00000592643 CUX1P39880 1505 aa20.95■□□□□ 0.94
H3F3B-212ENST00000592643 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
H3F3B-212ENST00000592643 POLA1P09884 1462 aaPredicted RBP20.9■□□□□ 0.94
H3F3B-212ENST00000592643 ZNF608Q9ULD9 1512 aaPredicted RBP20.87■□□□□ 0.93
H3F3B-212ENST00000592643 IFT140Q96RY7 1462 aa20.87■□□□□ 0.93
H3F3B-212ENST00000592643 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.93
H3F3B-212ENST00000592643 RAD54L2Q9Y4B4 1467 aa20.83■□□□□ 0.93
H3F3B-212ENST00000592643 TARBP1Q13395 1621 aaKnown RBP20.83■□□□□ 0.93
H3F3B-212ENST00000592643 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.927e-8■□□□□ 11.3
H3F3B-212ENST00000592643 SOGA1O94964 1423 aa20.78■□□□□ 0.92
H3F3B-212ENST00000592643 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
H3F3B-212ENST00000592643 AQRO60306 1485 aaKnown RBP eCLIP20.74■□□□□ 0.912e-9■■■■□ 20.2
H3F3B-212ENST00000592643 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
H3F3B-212ENST00000592643 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
H3F3B-212ENST00000592643 EIF4G3O43432 1585 aaKnown RBP20.7■□□□□ 0.9
H3F3B-212ENST00000592643 TDRD9Q8NDG6 1382 aaKnown RBP20.7■□□□□ 0.9
H3F3B-212ENST00000592643 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
H3F3B-212ENST00000592643 WDR97A6NE52 1622 aa20.64■□□□□ 0.89
H3F3B-212ENST00000592643 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
H3F3B-212ENST00000592643 ABCA5Q8WWZ7 1642 aa20.54■□□□□ 0.88
H3F3B-212ENST00000592643 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
H3F3B-212ENST00000592643 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
H3F3B-212ENST00000592643 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
H3F3B-212ENST00000592643 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
H3F3B-212ENST00000592643 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
H3F3B-212ENST00000592643 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
H3F3B-212ENST00000592643 CHD1O14646 1710 aa20.39■□□□□ 0.85
H3F3B-212ENST00000592643 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
H3F3B-212ENST00000592643 FBLN2P98095 1184 aa20.37■□□□□ 0.85
H3F3B-212ENST00000592643 ERICH3Q5RHP9 1530 aa20.35■□□□□ 0.85
H3F3B-212ENST00000592643 ADAMTS12P58397 1594 aa20.33■□□□□ 0.84
H3F3B-212ENST00000592643 IGF1RP08069 1367 aa20.33■□□□□ 0.84
H3F3B-212ENST00000592643 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
H3F3B-212ENST00000592643 KIF27Q86VH2 1401 aa20.31■□□□□ 0.84
H3F3B-212ENST00000592643 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
H3F3B-212ENST00000592643 RUSC2Q8N2Y8 1516 aa20.29■□□□□ 0.84
H3F3B-212ENST00000592643 TRIM41Q8WV44 630 aa20.29■□□□□ 0.84
H3F3B-212ENST00000592643 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
H3F3B-212ENST00000592643 CLASP1Q7Z460 1538 aa20.25■□□□□ 0.83
H3F3B-212ENST00000592643 NUP160Q12769 1436 aa20.21■□□□□ 0.83
H3F3B-212ENST00000592643 CEP170Q5SW79 1584 aa20.19■□□□□ 0.82
H3F3B-212ENST00000592643 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
H3F3B-212ENST00000592643 RIMBP3CA6NJZ7 1639 aa20.14■□□□□ 0.81
H3F3B-212ENST00000592643 RIMBP3BA6NNM3 1639 aa20.14■□□□□ 0.81
H3F3B-212ENST00000592643 RIMBP3Q9UFD9 1639 aa20.14■□□□□ 0.81
H3F3B-212ENST00000592643 CARMIL1Q5VZK9 1371 aa20.14■□□□□ 0.81
H3F3B-212ENST00000592643 CUL7Q14999 1698 aa20.12■□□□□ 0.81
H3F3B-212ENST00000592643 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
H3F3B-212ENST00000592643 ERCC6L2Q5T890 1561 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms