RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 NISCHQ9Y2I1 1504 aa50.54■■■■■ 5.68
USF2-216ENST00000607959 CCDC180Q9P1Z9 1646 aa44.18■■■■■ 4.66
USF2-216ENST00000607959 ZCCHC6Q5VYS8 1495 aaKnown RBP42.41■■■■■ 4.38
USF2-216ENST00000607959 ABCC9O60706 1549 aa42.06■■■■■ 4.32
USF2-216ENST00000607959 DCAF1Q9Y4B6 1507 aa41.78■■■■■ 4.28
USF2-216ENST00000607959 DCAF8L2P0C7V8 631 aa41.71■■■■■ 4.27
USF2-216ENST00000607959 MYO15BQ96JP2 1530 aa41.38■■■■■ 4.22
USF2-216ENST00000607959 NACADO15069 1562 aa41.19■■■■■ 4.19
USF2-216ENST00000607959 SHROOM4Q9ULL8 1493 aa40.99■■■■■ 4.15
USF2-216ENST00000607959 RB1CC1Q8TDY2 1594 aa40.9■■■■■ 4.14
USF2-216ENST00000607959 SCRIBQ14160 1630 aa40.6■■■■■ 4.09
USF2-216ENST00000607959 UNC13AQ9UPW8 1703 aa40.19■■■■■ 4.02
USF2-216ENST00000607959 BICRAQ9NZM4 1560 aa39.81■■■■□ 3.96
USF2-216ENST00000607959 PABPN1Q86U42 306 aaKnown RBP eCLIP39.6■■■■□ 3.938e-7■□□□□ 11.1
USF2-216ENST00000607959 CECR2Q9BXF3 1484 aa39.35■■■■□ 3.89
USF2-216ENST00000607959 SUPT5HO00267 1087 aaKnown RBP39.24■■■■□ 3.87
USF2-216ENST00000607959 RSF1Q96T23 1441 aaPredicted RBP39.11■■■■□ 3.85
USF2-216ENST00000607959 MROH2BQ7Z745 1585 aa39.07■■■■□ 3.85
USF2-216ENST00000607959 BAZ1AQ9NRL2 1556 aaPredicted RBP39■■■■□ 3.83
USF2-216ENST00000607959 SMARCA4P51532 1647 aa38.91■■■■□ 3.82
USF2-216ENST00000607959 WIZO95785 1651 aa38.73■■■■□ 3.79
USF2-216ENST00000607959 EIF4G1Q04637 1599 aaKnown RBP38.56■■■■□ 3.76
USF2-216ENST00000607959 PEG3Q9GZU2 1588 aa38.47■■■■□ 3.75
USF2-216ENST00000607959 ATAD2BQ9ULI0 1458 aa38.35■■■■□ 3.73
USF2-216ENST00000607959 TOP2AP11388 1531 aaKnown RBP38.28■■■■□ 3.72
USF2-216ENST00000607959 SMARCA2P51531 1590 aa38.26■■■■□ 3.71
USF2-216ENST00000607959 CC2D2AQ9P2K1 1620 aa38.07■■■■□ 3.68
USF2-216ENST00000607959 NCAPD3P42695 1498 aa38.06■■■■□ 3.68
USF2-216ENST00000607959 BAZ1BQ9UIG0 1483 aaKnown RBP38.06■■■■□ 3.68
USF2-216ENST00000607959 HMGXB3Q12766 1538 aa37.97■■■■□ 3.67
USF2-216ENST00000607959 CCDC88BA6NC98 1476 aa37.91■■■■□ 3.66
USF2-216ENST00000607959 CHIC1Q5VXU3 224 aa37.48■■■■□ 3.59
USF2-216ENST00000607959 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
USF2-216ENST00000607959 CFTRP13569 1480 aa37.14■■■■□ 3.54
USF2-216ENST00000607959 CADPSQ9ULU8 1353 aa37.04■■■■□ 3.52
USF2-216ENST00000607959 ABCC8Q09428 1581 aa37.02■■■■□ 3.52
USF2-216ENST00000607959 PRDM2Q13029 1718 aa36.92■■■■□ 3.5
USF2-216ENST00000607959 TRIM41Q8WV44 630 aa36.89■■■■□ 3.5
USF2-216ENST00000607959 NESP48681 1621 aa36.88■■■■□ 3.49
USF2-216ENST00000607959 LAMC3Q9Y6N6 1575 aa36.78■■■■□ 3.48
USF2-216ENST00000607959 WRNQ14191 1432 aaPredicted RBP eCLIP36.76■■■■□ 3.48
USF2-216ENST00000607959 SYNJ1O43426 1573 aa36.7■■■■□ 3.46
USF2-216ENST00000607959 FANCD2Q9BXW9 1451 aa36.63■■■■□ 3.45
USF2-216ENST00000607959 CUX1P39880 1505 aa36.55■■■■□ 3.44
USF2-216ENST00000607959 TOP2BQ02880 1626 aa36.53■■■■□ 3.44
USF2-216ENST00000607959 BIVM-ERCC5R4GMW8 1640 aa36.51■■■■□ 3.43
USF2-216ENST00000607959 PDS5BQ9NTI5 1447 aa36.46■■■■□ 3.43
USF2-216ENST00000607959 KIF21AQ7Z4S6 1674 aa36.42■■■■□ 3.42
USF2-216ENST00000607959 CEP164Q9UPV0 1460 aa36.4■■■■□ 3.42
USF2-216ENST00000607959 SOGA1O94964 1423 aa36.27■■■■□ 3.4
USF2-216ENST00000607959 DNMBPQ6XZF7 1577 aa36.26■■■■□ 3.39
USF2-216ENST00000607959 URB2Q14146 1524 aaKnown RBP36.25■■■■□ 3.39
USF2-216ENST00000607959 FAM9AQ8IZU1 332 aaPredicted RBP36.24■■■■□ 3.39
USF2-216ENST00000607959 TOPBP1Q92547 1522 aa36.23■■■■□ 3.39
USF2-216ENST00000607959 RUSC2Q8N2Y8 1516 aa36.19■■■■□ 3.38
USF2-216ENST00000607959 FGD5Q6ZNL6 1462 aa36.15■■■■□ 3.38
USF2-216ENST00000607959 MRC2Q9UBG0 1479 aa36.06■■■■□ 3.36
USF2-216ENST00000607959 POLA1P09884 1462 aaPredicted RBP36.04■■■■□ 3.36
USF2-216ENST00000607959 LOC105371045A0A1W2PR82 267 aa36.04■■■■□ 3.36
USF2-216ENST00000607959 EEA1Q15075 1411 aa36.01■■■■□ 3.36
USF2-216ENST00000607959 ERCC6Q03468 1493 aa36■■■■□ 3.35
USF2-216ENST00000607959 RAD54L2Q9Y4B4 1467 aa35.93■■■■□ 3.34
USF2-216ENST00000607959 WDR62O43379 1518 aa35.91■■■■□ 3.34
USF2-216ENST00000607959 THOC2Q8NI27 1593 aaKnown RBP35.91■■■■□ 3.34
USF2-216ENST00000607959 CSRNP3Q8WYN3 585 aa35.89■■■■□ 3.34
USF2-216ENST00000607959 CUX2O14529 1486 aa35.83■■■■□ 3.33
USF2-216ENST00000607959 ABCA10Q8WWZ4 1543 aa35.83■■■■□ 3.33
USF2-216ENST00000607959 KIF27Q86VH2 1401 aa35.82■■■■□ 3.32
USF2-216ENST00000607959 WDR97A6NE52 1622 aa35.79■■■■□ 3.32
USF2-216ENST00000607959 TARBP1Q13395 1621 aaKnown RBP35.75■■■■□ 3.31
USF2-216ENST00000607959 EHMT2Q96KQ7 1210 aa35.73■■■■□ 3.31
USF2-216ENST00000607959 KIF21BO75037 1637 aa35.64■■■■□ 3.3
USF2-216ENST00000607959 IGF1RP08069 1367 aa35.62■■■■□ 3.29
USF2-216ENST00000607959 PRXQ9BXM0 1461 aa35.59■■■■□ 3.29
USF2-216ENST00000607959 ABCA5Q8WWZ7 1642 aa35.59■■■■□ 3.29
USF2-216ENST00000607959 TDRD9Q8NDG6 1382 aaKnown RBP35.58■■■■□ 3.29
USF2-216ENST00000607959 IFT140Q96RY7 1462 aa35.55■■■■□ 3.28
USF2-216ENST00000607959 GOLGA3Q08378 1498 aa35.54■■■■□ 3.28
USF2-216ENST00000607959 RAPGEF2Q9Y4G8 1499 aa35.53■■■■□ 3.28
USF2-216ENST00000607959 GAPVD1Q14C86 1478 aa35.47■■■■□ 3.27
USF2-216ENST00000607959 ZNF608Q9ULD9 1512 aaPredicted RBP35.46■■■■□ 3.27
USF2-216ENST00000607959 ERICH3Q5RHP9 1530 aa35.44■■■■□ 3.26
USF2-216ENST00000607959 AQRO60306 1485 aaKnown RBP eCLIP35.42■■■■□ 3.261e-7■■■■□ 23
USF2-216ENST00000607959 TNIKQ9UKE5 1360 aa35.39■■■■□ 3.26
USF2-216ENST00000607959 CARMIL1Q5VZK9 1371 aa35.38■■■■□ 3.25
USF2-216ENST00000607959 UBTFP17480 764 aaKnown RBP35.34■■■■□ 3.25
USF2-216ENST00000607959 PBRM1Q86U86 1689 aa35.32■■■■□ 3.25
USF2-216ENST00000607959 CUL7Q14999 1698 aa35.31■■■■□ 3.24
USF2-216ENST00000607959 EIF4G3O43432 1585 aaKnown RBP35.3■■■■□ 3.24
USF2-216ENST00000607959 GRIN2BQ13224 1484 aa35.23■■■■□ 3.23
USF2-216ENST00000607959 CEP162Q5TB80 1403 aa35.19■■■■□ 3.22
USF2-216ENST00000607959 ADAMTS12P58397 1594 aa35.13■■■■□ 3.21
USF2-216ENST00000607959 FHAD1B1AJZ9 1412 aa35.08■■■■□ 3.21
USF2-216ENST00000607959 SNAPC4Q5SXM2 1469 aa35.06■■■■□ 3.2
USF2-216ENST00000607959 CLIP1P30622 1438 aa34.97■■■■□ 3.19
USF2-216ENST00000607959 MAGI1Q96QZ7 1491 aaPredicted RBP34.96■■■■□ 3.19
USF2-216ENST00000607959 CTTNBP2Q8WZ74 1663 aa34.89■■■■□ 3.18
USF2-216ENST00000607959 RANGAP1P46060 587 aaPredicted RBP34.89■■■■□ 3.18
USF2-216ENST00000607959 SYNJ2O15056 1496 aa34.84■■■■□ 3.17
USF2-216ENST00000607959 GRIN2AQ12879 1464 aa34.83■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms