RNA–Protein interactions for RNA: ENST00000586607.5

H3F3B-204, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 4 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-204ENST00000586607 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
H3F3B-204ENST00000586607 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
H3F3B-204ENST00000586607 ABCC9O60706 1549 aa20.55■□□□□ 0.88
H3F3B-204ENST00000586607 NACADO15069 1562 aa19.9■□□□□ 0.78
H3F3B-204ENST00000586607 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
H3F3B-204ENST00000586607 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
H3F3B-204ENST00000586607 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
H3F3B-204ENST00000586607 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
H3F3B-204ENST00000586607 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
H3F3B-204ENST00000586607 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
H3F3B-204ENST00000586607 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.67
H3F3B-204ENST00000586607 SCRIBQ14160 1630 aa19.2■□□□□ 0.66
H3F3B-204ENST00000586607 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
H3F3B-204ENST00000586607 SHROOM4Q9ULL8 1493 aa19.19■□□□□ 0.66
H3F3B-204ENST00000586607 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
H3F3B-204ENST00000586607 EIF4G1Q04637 1599 aaKnown RBP18.75■□□□□ 0.59
H3F3B-204ENST00000586607 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
H3F3B-204ENST00000586607 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
H3F3B-204ENST00000586607 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
H3F3B-204ENST00000586607 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
H3F3B-204ENST00000586607 NCAPD3P42695 1498 aa18.38■□□□□ 0.53
H3F3B-204ENST00000586607 ATAD2BQ9ULI0 1458 aa18.35■□□□□ 0.53
H3F3B-204ENST00000586607 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
H3F3B-204ENST00000586607 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
H3F3B-204ENST00000586607 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
H3F3B-204ENST00000586607 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
H3F3B-204ENST00000586607 BAZ1BQ9UIG0 1483 aaKnown RBP18.17■□□□□ 0.5
H3F3B-204ENST00000586607 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
H3F3B-204ENST00000586607 WIZO95785 1651 aa18.08■□□□□ 0.48
H3F3B-204ENST00000586607 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.47
H3F3B-204ENST00000586607 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
H3F3B-204ENST00000586607 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
H3F3B-204ENST00000586607 NESP48681 1621 aa17.8■□□□□ 0.44
H3F3B-204ENST00000586607 PDS5BQ9NTI5 1447 aa17.73■□□□□ 0.43
H3F3B-204ENST00000586607 CFTRP13569 1480 aa17.73■□□□□ 0.43
H3F3B-204ENST00000586607 ERCC6Q03468 1493 aa17.73■□□□□ 0.43
H3F3B-204ENST00000586607 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
H3F3B-204ENST00000586607 CUX2O14529 1486 aa17.62■□□□□ 0.41
H3F3B-204ENST00000586607 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
H3F3B-204ENST00000586607 SUPT5HO00267 1087 aaKnown RBP17.58■□□□□ 0.4
H3F3B-204ENST00000586607 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
H3F3B-204ENST00000586607 FANCD2Q9BXW9 1451 aa17.57■□□□□ 0.4
H3F3B-204ENST00000586607 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
H3F3B-204ENST00000586607 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
H3F3B-204ENST00000586607 MRC2Q9UBG0 1479 aa17.52■□□□□ 0.4
H3F3B-204ENST00000586607 WDR62O43379 1518 aa17.49■□□□□ 0.39
H3F3B-204ENST00000586607 URB2Q14146 1524 aaKnown RBP17.39■□□□□ 0.37
H3F3B-204ENST00000586607 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
H3F3B-204ENST00000586607 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
H3F3B-204ENST00000586607 TOPBP1Q92547 1522 aa17.3■□□□□ 0.36
H3F3B-204ENST00000586607 IFT140Q96RY7 1462 aa17.21■□□□□ 0.35
H3F3B-204ENST00000586607 CUX1P39880 1505 aa17.17■□□□□ 0.34
H3F3B-204ENST00000586607 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
H3F3B-204ENST00000586607 TARBP1Q13395 1621 aaKnown RBP17.12■□□□□ 0.33
H3F3B-204ENST00000586607 FGD5Q6ZNL6 1462 aa17.11■□□□□ 0.33
H3F3B-204ENST00000586607 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.337e-8■□□□□ 11.3
H3F3B-204ENST00000586607 SOGA1O94964 1423 aa17.08■□□□□ 0.32
H3F3B-204ENST00000586607 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
H3F3B-204ENST00000586607 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
H3F3B-204ENST00000586607 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
H3F3B-204ENST00000586607 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
H3F3B-204ENST00000586607 RAD54L2Q9Y4B4 1467 aa17.04■□□□□ 0.32
H3F3B-204ENST00000586607 SYNJ1O43426 1573 aa17.02■□□□□ 0.32
H3F3B-204ENST00000586607 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.31
H3F3B-204ENST00000586607 ABCA10Q8WWZ4 1543 aa17■□□□□ 0.31
H3F3B-204ENST00000586607 DNAJC5Q9H3Z4 198 aa16.98■□□□□ 0.31
H3F3B-204ENST00000586607 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.312e-9■■■■□ 20.2
H3F3B-204ENST00000586607 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
H3F3B-204ENST00000586607 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
H3F3B-204ENST00000586607 ABCA5Q8WWZ7 1642 aa16.9■□□□□ 0.3
H3F3B-204ENST00000586607 GAPVD1Q14C86 1478 aa16.89■□□□□ 0.29
H3F3B-204ENST00000586607 MAGI1Q96QZ7 1491 aaPredicted RBP16.87■□□□□ 0.29
H3F3B-204ENST00000586607 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
H3F3B-204ENST00000586607 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.28
H3F3B-204ENST00000586607 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
H3F3B-204ENST00000586607 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
H3F3B-204ENST00000586607 SYNJ2O15056 1496 aa16.79■□□□□ 0.28
H3F3B-204ENST00000586607 KIF27Q86VH2 1401 aa16.75■□□□□ 0.27
H3F3B-204ENST00000586607 CHD1O14646 1710 aa16.74■□□□□ 0.27
H3F3B-204ENST00000586607 CHMP7Q8WUX9 453 aaPredicted RBP16.73■□□□□ 0.27
H3F3B-204ENST00000586607 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
H3F3B-204ENST00000586607 FHAD1B1AJZ9 1412 aa16.72■□□□□ 0.27
H3F3B-204ENST00000586607 FBLN2P98095 1184 aa16.69■□□□□ 0.26
H3F3B-204ENST00000586607 IGF1RP08069 1367 aa16.68■□□□□ 0.26
H3F3B-204ENST00000586607 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
H3F3B-204ENST00000586607 TRIM41Q8WV44 630 aa16.67■□□□□ 0.26
H3F3B-204ENST00000586607 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
H3F3B-204ENST00000586607 NUP160Q12769 1436 aa16.63■□□□□ 0.25
H3F3B-204ENST00000586607 CUL7Q14999 1698 aa16.62■□□□□ 0.25
H3F3B-204ENST00000586607 ARHGEF11O15085 1522 aa16.57■□□□□ 0.24
H3F3B-204ENST00000586607 CEP170Q5SW79 1584 aa16.56■□□□□ 0.24
H3F3B-204ENST00000586607 CARMIL1Q5VZK9 1371 aa16.56■□□□□ 0.24
H3F3B-204ENST00000586607 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
H3F3B-204ENST00000586607 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
H3F3B-204ENST00000586607 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
H3F3B-204ENST00000586607 RUSC2Q8N2Y8 1516 aa16.54■□□□□ 0.24
H3F3B-204ENST00000586607 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
H3F3B-204ENST00000586607 EEA1Q15075 1411 aa16.51■□□□□ 0.23
H3F3B-204ENST00000586607 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
H3F3B-204ENST00000586607 KIAA0586Q9BVV6 1533 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms