Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 BCOR-207ENST00000412952 288 ntTSL 511.82□□□□□ -0.522e-6■■■□□ 15.7
LSM11P83369 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.762e-6■■■□□ 15.7
LSM11P83369 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.962e-6■■■□□ 15.7
LSM11P83369 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.972e-6■■■□□ 15.7
LSM11P83369 BCOR-206ENST00000406200 4216 ntTSL 28.67□□□□□ -1.022e-6■■■□□ 15.7
LSM11P83369 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.152e-6■■■□□ 15.7
LSM11P83369 AMT-249ENST00000637527 1174 ntTSL 218.37■□□□□ 0.533e-7■■■□□ 15.7
LSM11P83369 AMT-240ENST00000636871 2076 ntTSL 516.46■□□□□ 0.223e-7■■■□□ 15.7
LSM11P83369 AMT-252ENST00000637821 2026 ntTSL 516.44■□□□□ 0.223e-7■■■□□ 15.7
LSM11P83369 AMT-251ENST00000637684 2168 ntTSL 516.38■□□□□ 0.213e-7■■■□□ 15.7
LSM11P83369 AMT-238ENST00000636803 1945 ntTSL 516.19■□□□□ 0.183e-7■■■□□ 15.7
LSM11P83369 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16■□□□□ 0.153e-7■■■□□ 15.7
LSM11P83369 AMT-254ENST00000637982 2330 ntTSL 515.97■□□□□ 0.153e-7■■■□□ 15.7
LSM11P83369 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.56■□□□□ 0.083e-7■■■□□ 15.7
LSM11P83369 AMT-234ENST00000636587 2040 ntTSL 515.47■□□□□ 0.073e-7■■■□□ 15.7
LSM11P83369 AMT-225ENST00000635889 2260 ntTSL 515.36■□□□□ 0.053e-7■■■□□ 15.7
LSM11P83369 AMT-227ENST00000635936 2223 ntTSL 515.16■□□□□ 0.023e-7■■■□□ 15.7
LSM11P83369 AMT-229ENST00000636070 1827 ntTSL 215.05■□□□□ -03e-7■■■□□ 15.7
LSM11P83369 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.88□□□□□ -0.033e-7■■■□□ 15.7
LSM11P83369 AMT-257ENST00000638092 2448 ntTSL 514.87□□□□□ -0.033e-7■■■□□ 15.7
LSM11P83369 AMT-244ENST00000637114 1991 ntTSL 514.87□□□□□ -0.033e-7■■■□□ 15.7
LSM11P83369 AMT-255ENST00000637994 2468 ntTSL 514.61□□□□□ -0.073e-7■■■□□ 15.7
LSM11P83369 AMT-211ENST00000476127 2152 ntTSL 514.56□□□□□ -0.083e-7■■■□□ 15.7
LSM11P83369 AMT-246ENST00000637291 2662 ntTSL 514.35□□□□□ -0.113e-7■■■□□ 15.7
LSM11P83369 AMT-241ENST00000636978 1613 ntTSL 514.3□□□□□ -0.123e-7■■■□□ 15.7
LSM11P83369 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.3□□□□□ -0.123e-7■■■□□ 15.7
LSM11P83369 AMT-214ENST00000478594 2110 ntTSL 514.25□□□□□ -0.133e-7■■■□□ 15.7
LSM11P83369 AMT-212ENST00000476226 2379 ntTSL 514.23□□□□□ -0.133e-7■■■□□ 15.7
LSM11P83369 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.01□□□□□ -0.173e-7■■■□□ 15.7
LSM11P83369 AMT-222ENST00000635772 2768 ntTSL 513.92□□□□□ -0.183e-7■■■□□ 15.7
LSM11P83369 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.183e-7■■■□□ 15.7
LSM11P83369 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.213e-7■■■□□ 15.7
LSM11P83369 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.71□□□□□ -0.213e-7■■■□□ 15.7
LSM11P83369 AMT-248ENST00000637457 2815 ntTSL 513.71□□□□□ -0.223e-7■■■□□ 15.7
LSM11P83369 AMT-247ENST00000637455 1512 ntTSL 513.68□□□□□ -0.223e-7■■■□□ 15.7
LSM11P83369 AMT-243ENST00000637059 1324 ntTSL 513.66□□□□□ -0.223e-7■■■□□ 15.7
LSM11P83369 AMT-231ENST00000636188 804 ntTSL 513.65□□□□□ -0.223e-7■■■□□ 15.7
LSM11P83369 AMT-235ENST00000636594 1579 nt13.45□□□□□ -0.263e-7■■■□□ 15.7
LSM11P83369 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.283e-7■■■□□ 15.7
LSM11P83369 AMT-237ENST00000636725 2677 ntTSL 513.29□□□□□ -0.283e-7■■■□□ 15.7
LSM11P83369 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.03□□□□□ -0.323e-7■■■□□ 15.7
LSM11P83369 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.84□□□□□ -0.353e-7■■■□□ 15.7
LSM11P83369 AMT-242ENST00000636991 2403 ntTSL 512.71□□□□□ -0.373e-7■■■□□ 15.7
LSM11P83369 AMT-245ENST00000637268 2855 ntTSL 512.64□□□□□ -0.393e-7■■■□□ 15.7
LSM11P83369 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.52□□□□□ -0.43e-7■■■□□ 15.7
LSM11P83369 AMT-228ENST00000636023 1780 ntTSL 512.39□□□□□ -0.433e-7■■■□□ 15.7
LSM11P83369 AC104452.1-202ENST00000636204 3240 ntTSL 512.15□□□□□ -0.463e-7■■■□□ 15.7
LSM11P83369 AMT-218ENST00000493046 3504 ntTSL 511.88□□□□□ -0.513e-7■■■□□ 15.7
LSM11P83369 AC104452.1-206ENST00000637088 6740 ntTSL 511.56□□□□□ -0.563e-7■■■□□ 15.7
LSM11P83369 AC104452.1-204ENST00000637442 4178 ntTSL 511.3□□□□□ -0.63e-7■■■□□ 15.7
LSM11P83369 AMT-253ENST00000637914 3677 ntTSL 511.14□□□□□ -0.633e-7■■■□□ 15.7
LSM11P83369 AC104452.1-205ENST00000638079 3146 ntTSL 511.04□□□□□ -0.643e-7■■■□□ 15.7
LSM11P83369 AMT-210ENST00000473163 4544 ntTSL 211.04□□□□□ -0.643e-7■■■□□ 15.7
LSM11P83369 AMT-223ENST00000635798 1276 ntTSL 510.4□□□□□ -0.743e-7■■■□□ 15.7
LSM11P83369 AC104452.1-201ENST00000638115 4453 ntTSL 510.33□□□□□ -0.763e-7■■■□□ 15.7
LSM11P83369 AMT-230ENST00000636148 3865 ntTSL 510.29□□□□□ -0.763e-7■■■□□ 15.7
LSM11P83369 AC104452.1-207ENST00000638014 4510 ntTSL 510.24□□□□□ -0.773e-7■■■□□ 15.7
LSM11P83369 AMT-236ENST00000636597 1509 ntTSL 5 BASIC9.88□□□□□ -0.833e-7■■■□□ 15.7
LSM11P83369 AMT-209ENST00000465925 3976 ntTSL 58.43□□□□□ -1.063e-7■■■□□ 15.7
LSM11P83369 LZTR1-204ENST00000415817 2323 ntTSL 315.85■□□□□ 0.133e-9■■■□□ 15.7
LSM11P83369 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.163e-9■■■□□ 15.7
LSM11P83369 LZTR1-209ENST00000463909 3505 ntTSL 1 (best)11.49□□□□□ -0.573e-9■■■□□ 15.7
LSM11P83369 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.68■■□□□ 1.066e-9■■■□□ 15.6
LSM11P83369 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.241e-6■■■□□ 15.6
LSM11P83369 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.026e-9■■■□□ 15.6
LSM11P83369 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.9□□□□□ -0.181e-6■■■□□ 15.6
LSM11P83369 DGAT1-203ENST00000524965 1336 ntTSL 511.57□□□□□ -0.566e-9■■■□□ 15.6
LSM11P83369 NADSYN1-204ENST00000525200 3616 ntTSL 29.14□□□□□ -0.951e-6■■■□□ 15.6
LSM11P83369 LUC7L-210ENST00000430864 695 ntTSL 510.78□□□□□ -0.685e-8■■■□□ 15.6
LSM11P83369 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.187e-8■■■□□ 15.6
LSM11P83369 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.377e-8■■■□□ 15.6
LSM11P83369 ELMOD3-221ENST00000490508 2148 ntTSL 513.97□□□□□ -0.171e-6■■■□□ 15.6
LSM11P83369 ELMOD3-208ENST00000414593 1932 ntTSL 1 (best)12.75□□□□□ -0.371e-6■■■□□ 15.6
LSM11P83369 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.451e-6■■■□□ 15.6
LSM11P83369 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC12.22□□□□□ -0.451e-6■■■□□ 15.6
LSM11P83369 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.451e-6■■■□□ 15.6
LSM11P83369 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.51e-6■■■□□ 15.6
LSM11P83369 ELMOD3-205ENST00000409344 2564 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.631e-6■■■□□ 15.6
LSM11P83369 ELMOD3-210ENST00000423095 2216 ntTSL 510.03□□□□□ -0.81e-6■■■□□ 15.6
LSM11P83369 ELMOD3-214ENST00000446464 4761 ntTSL 1 (best)8.1□□□□□ -1.111e-6■■■□□ 15.6
LSM11P83369 TCIRG1-212ENST00000530802 223 ntTSL 1 (best)15.64■□□□□ 0.095e-7■■■□□ 15.6
LSM11P83369 TCIRG1-210ENST00000530063 220 ntTSL 1 (best)5.77□□□□□ -1.495e-7■■■□□ 15.6
LSM11P83369 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.98□□□□□ -0.339e-7■■■□□ 15.6
LSM11P83369 C22orf34-205ENST00000416411 542 ntTSL 412.37□□□□□ -0.439e-7■■■□□ 15.6
LSM11P83369 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.013e-6■■■□□ 15.6
LSM11P83369 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.27□□□□□ -0.283e-6■■■□□ 15.6
LSM11P83369 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.22□□□□□ -0.293e-6■■■□□ 15.6
LSM11P83369 ZDHHC8-205ENST00000468112 524 ntTSL 312.49□□□□□ -0.413e-6■■■□□ 15.6
LSM11P83369 AC090164.2-201ENST00000611487 516 ntBASIC12.77□□□□□ -0.376e-7■■■□□ 15.6
LSM11P83369 PCSK6-203ENST00000557794 1196 ntTSL 510.06□□□□□ -0.86e-7■■■□□ 15.6
LSM11P83369 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.211e-6■■■□□ 15.6
LSM11P83369 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.291e-6■■■□□ 15.6
LSM11P83369 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC7.58□□□□□ -1.26e-32■■■□□ 15.5
LSM11P83369 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.853e-12■■■□□ 15.5
LSM11P83369 CAPN12-205ENST00000595177 488 ntTSL 414□□□□□ -0.177e-7■■■□□ 15.5
LSM11P83369 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.052e-6■■■□□ 15.5
LSM11P83369 ILF3-221ENST00000591649 2579 ntTSL 213.49□□□□□ -0.252e-12■■■□□ 15.5
LSM11P83369 RECQL4-205ENST00000532846 1055 ntTSL 515.47■□□□□ 0.078e-8■■■□□ 15.5
LSM11P83369 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.5■□□□□ 0.715e-7■■■□□ 15.5
LSM11P83369 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.545e-7■■■□□ 15.5
Retrieved 100 of 11,495 protein–RNA pairs in 63 ms