RNA–Protein interactions for RNA: ENST00000635889.1

AMT-225, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,260 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-225ENST00000635889 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
AMT-225ENST00000635889 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
AMT-225ENST00000635889 ZCCHC6Q5VYS8 1495 aaKnown RBP28.95■■■□□ 2.22
AMT-225ENST00000635889 SHROOM4Q9ULL8 1493 aa28.65■■■□□ 2.18
AMT-225ENST00000635889 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.15
AMT-225ENST00000635889 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.12
AMT-225ENST00000635889 HRCP23327 699 aa27.94■■■□□ 2.06
AMT-225ENST00000635889 ABCC9O60706 1549 aa27.8■■■□□ 2.04
AMT-225ENST00000635889 SUPT5HO00267 1087 aaKnown RBP27.78■■■□□ 2.04
AMT-225ENST00000635889 MYO15BQ96JP2 1530 aa27.69■■■□□ 2.02
AMT-225ENST00000635889 SCRIBQ14160 1630 aa27.54■■■□□ 2
AMT-225ENST00000635889 NACADO15069 1562 aa27.48■■□□□ 1.99
AMT-225ENST00000635889 PELP1Q8IZL8 1130 aaKnown RBP27.32■■□□□ 1.96
AMT-225ENST00000635889 RB1CC1Q8TDY2 1594 aa27.17■■□□□ 1.94
AMT-225ENST00000635889 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
AMT-225ENST00000635889 PPARGC1BQ86YN6 1023 aaKnown RBP27.03■■□□□ 1.92
AMT-225ENST00000635889 RSF1Q96T23 1441 aaPredicted RBP26.89■■□□□ 1.9
AMT-225ENST00000635889 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
AMT-225ENST00000635889 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
AMT-225ENST00000635889 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
AMT-225ENST00000635889 MROH2BQ7Z745 1585 aa26.65■■□□□ 1.86
AMT-225ENST00000635889 WIZO95785 1651 aa26.5■■□□□ 1.83
AMT-225ENST00000635889 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.83
AMT-225ENST00000635889 BICRAQ9NZM4 1560 aa26.43■■□□□ 1.82
AMT-225ENST00000635889 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.81
AMT-225ENST00000635889 PABPN1Q86U42 306 aaKnown RBP eCLIP26.39■■□□□ 1.813e-6■■■■□ 23.3
AMT-225ENST00000635889 TRIM26Q12899 539 aaPredicted RBP26.38■■□□□ 1.81
AMT-225ENST00000635889 MYT1Q01538 1121 aa26.37■■□□□ 1.81
AMT-225ENST00000635889 ZEB1P37275 1124 aaPredicted RBP26.33■■□□□ 1.81
AMT-225ENST00000635889 SMARCA4P51532 1647 aa26.33■■□□□ 1.81
AMT-225ENST00000635889 TOP2AP11388 1531 aaKnown RBP26.1■■□□□ 1.77
AMT-225ENST00000635889 LOC105371045A0A1W2PR82 267 aa26.02■■□□□ 1.76
AMT-225ENST00000635889 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
AMT-225ENST00000635889 SMARCA2P51531 1590 aa25.93■■□□□ 1.74
AMT-225ENST00000635889 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
AMT-225ENST00000635889 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
AMT-225ENST00000635889 PEG3Q9GZU2 1588 aa25.88■■□□□ 1.73
AMT-225ENST00000635889 ACIN1Q9UKV3 1341 aaKnown RBP25.78■■□□□ 1.72
AMT-225ENST00000635889 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
AMT-225ENST00000635889 FAM9AQ8IZU1 332 aaPredicted RBP25.67■■□□□ 1.7
AMT-225ENST00000635889 BAZ1BQ9UIG0 1483 aaKnown RBP25.65■■□□□ 1.7
AMT-225ENST00000635889 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
AMT-225ENST00000635889 NEUROD1Q13562 356 aa25.59■■□□□ 1.69
AMT-225ENST00000635889 GTF3C3Q9Y5Q9 886 aa25.44■■□□□ 1.66
AMT-225ENST00000635889 CENPBP07199 599 aaPredicted RBP25.43■■□□□ 1.66
AMT-225ENST00000635889 EHMT2Q96KQ7 1210 aa25.42■■□□□ 1.66
AMT-225ENST00000635889 NCAPD3P42695 1498 aa25.39■■□□□ 1.65
AMT-225ENST00000635889 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
AMT-225ENST00000635889 WRNQ14191 1432 aaPredicted RBP eCLIP25.28■■□□□ 1.64
AMT-225ENST00000635889 SOGA1O94964 1423 aa25.23■■□□□ 1.63
AMT-225ENST00000635889 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
AMT-225ENST00000635889 DIEXFQ68CQ4 756 aaKnown RBP25.19■■□□□ 1.62
AMT-225ENST00000635889 RUSC2Q8N2Y8 1516 aa25.14■■□□□ 1.62
AMT-225ENST00000635889 CC2D2AQ9P2K1 1620 aa25.11■■□□□ 1.61
AMT-225ENST00000635889 EEA1Q15075 1411 aa25.06■■□□□ 1.6
AMT-225ENST00000635889 CCER1Q8TC90 406 aaPredicted RBP25.01■■□□□ 1.59
AMT-225ENST00000635889 CSRNP3Q8WYN3 585 aa25.01■■□□□ 1.59
AMT-225ENST00000635889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25■■□□□ 1.59
AMT-225ENST00000635889 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
AMT-225ENST00000635889 CFTRP13569 1480 aa24.99■■□□□ 1.59
AMT-225ENST00000635889 BIVM-ERCC5R4GMW8 1640 aa24.95■■□□□ 1.58
AMT-225ENST00000635889 PRDM2Q13029 1718 aa24.9■■□□□ 1.58
AMT-225ENST00000635889 CUX1P39880 1505 aa24.87■■□□□ 1.57
AMT-225ENST00000635889 TTBK1Q5TCY1 1321 aaPredicted RBP24.87■■□□□ 1.57
AMT-225ENST00000635889 TNIKQ9UKE5 1360 aa24.85■■□□□ 1.57
AMT-225ENST00000635889 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
AMT-225ENST00000635889 CEP162Q5TB80 1403 aa24.83■■□□□ 1.56
AMT-225ENST00000635889 UBTFP17480 764 aaKnown RBP24.82■■□□□ 1.56
AMT-225ENST00000635889 CADPSQ9ULU8 1353 aa24.81■■□□□ 1.56
AMT-225ENST00000635889 KIF21BO75037 1637 aa24.79■■□□□ 1.56
AMT-225ENST00000635889 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
AMT-225ENST00000635889 ZNF316A6NFI3 1004 aaPredicted RBP24.74■■□□□ 1.55
AMT-225ENST00000635889 RAPGEF2Q9Y4G8 1499 aa24.66■■□□□ 1.54
AMT-225ENST00000635889 CLSPNQ9HAW4 1339 aa24.6■■□□□ 1.53
AMT-225ENST00000635889 NESP48681 1621 aa24.59■■□□□ 1.53
AMT-225ENST00000635889 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
AMT-225ENST00000635889 KIF27Q86VH2 1401 aa24.56■■□□□ 1.52
AMT-225ENST00000635889 YTHDC1Q96MU7 727 aaKnown RBP24.53■■□□□ 1.52
AMT-225ENST00000635889 PRXQ9BXM0 1461 aa24.53■■□□□ 1.52
AMT-225ENST00000635889 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
AMT-225ENST00000635889 DNAJC5BQ9UF47 199 aa24.51■■□□□ 1.51
AMT-225ENST00000635889 CLIP1P30622 1438 aa24.51■■□□□ 1.51
AMT-225ENST00000635889 ERICH3Q5RHP9 1530 aa24.5■■□□□ 1.51
AMT-225ENST00000635889 MIER1Q8N108 512 aa24.49■■□□□ 1.51
AMT-225ENST00000635889 CUX2O14529 1486 aa24.45■■□□□ 1.51
AMT-225ENST00000635889 LAMC3Q9Y6N6 1575 aa24.44■■□□□ 1.5
AMT-225ENST00000635889 RANGAP1P46060 587 aaPredicted RBP24.44■■□□□ 1.5
AMT-225ENST00000635889 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
AMT-225ENST00000635889 ANP32EQ9BTT0 268 aa24.38■■□□□ 1.49
AMT-225ENST00000635889 TOPBP1Q92547 1522 aa24.37■■□□□ 1.49
AMT-225ENST00000635889 BCL11AQ9H165 835 aa24.36■■□□□ 1.49
AMT-225ENST00000635889 IGF1RP08069 1367 aa24.33■■□□□ 1.49
AMT-225ENST00000635889 VPS8Q8N3P4 1428 aa24.33■■□□□ 1.48
AMT-225ENST00000635889 RAD54L2Q9Y4B4 1467 aa24.31■■□□□ 1.48
AMT-225ENST00000635889 POLA1P09884 1462 aaPredicted RBP24.3■■□□□ 1.48
AMT-225ENST00000635889 SUPT16HQ9Y5B9 1047 aaKnown RBP24.29■■□□□ 1.48
AMT-225ENST00000635889 URB2Q14146 1524 aaKnown RBP24.28■■□□□ 1.48
AMT-225ENST00000635889 KIF21AQ7Z4S6 1674 aa24.26■■□□□ 1.47
AMT-225ENST00000635889 PDS5BQ9NTI5 1447 aa24.25■■□□□ 1.47
AMT-225ENST00000635889 ABCA10Q8WWZ4 1543 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms