RNA–Protein interactions for RNA: ENST00000636148.1

AMT-230, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 3,865 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-230ENST00000636148 NISCHQ9Y2I1 1504 aa22.96■■□□□ 1.27
AMT-230ENST00000636148 DCAF8L2P0C7V8 631 aa20.78■□□□□ 0.92
AMT-230ENST00000636148 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
AMT-230ENST00000636148 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
AMT-230ENST00000636148 CCDC180Q9P1Z9 1646 aa19.43■□□□□ 0.7
AMT-230ENST00000636148 ABCC9O60706 1549 aa19.37■□□□□ 0.69
AMT-230ENST00000636148 ZCCHC6Q5VYS8 1495 aaKnown RBP19.16■□□□□ 0.66
AMT-230ENST00000636148 PABPN1Q86U42 306 aaKnown RBP eCLIP18.69■□□□□ 0.583e-6■■■■□ 23.3
AMT-230ENST00000636148 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
AMT-230ENST00000636148 DCAF1Q9Y4B6 1507 aa18.55■□□□□ 0.56
AMT-230ENST00000636148 NACADO15069 1562 aa18.46■□□□□ 0.55
AMT-230ENST00000636148 RB1CC1Q8TDY2 1594 aa18.43■□□□□ 0.54
AMT-230ENST00000636148 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
AMT-230ENST00000636148 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
AMT-230ENST00000636148 TRIM41Q8WV44 630 aa18.32■□□□□ 0.52
AMT-230ENST00000636148 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
AMT-230ENST00000636148 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.5
AMT-230ENST00000636148 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
AMT-230ENST00000636148 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
AMT-230ENST00000636148 LOC105371045A0A1W2PR82 267 aa17.9■□□□□ 0.46
AMT-230ENST00000636148 MROH2BQ7Z745 1585 aa17.82■□□□□ 0.44
AMT-230ENST00000636148 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
AMT-230ENST00000636148 RANGAP1P46060 587 aaPredicted RBP17.78■□□□□ 0.44
AMT-230ENST00000636148 UBTFP17480 764 aaKnown RBP17.76■□□□□ 0.43
AMT-230ENST00000636148 UNC13AQ9UPW8 1703 aa17.67■□□□□ 0.42
AMT-230ENST00000636148 TTBK1Q5TCY1 1321 aaPredicted RBP17.65■□□□□ 0.42
AMT-230ENST00000636148 PCGF6Q9BYE7 350 aa17.61■□□□□ 0.41
AMT-230ENST00000636148 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
AMT-230ENST00000636148 WIZO95785 1651 aa17.59■□□□□ 0.41
AMT-230ENST00000636148 APLP2Q06481 763 aa17.56■□□□□ 0.4
AMT-230ENST00000636148 BICRAQ9NZM4 1560 aa17.51■□□□□ 0.39
AMT-230ENST00000636148 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
AMT-230ENST00000636148 PPARGC1BQ86YN6 1023 aaKnown RBP17.5■□□□□ 0.39
AMT-230ENST00000636148 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
AMT-230ENST00000636148 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
AMT-230ENST00000636148 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
AMT-230ENST00000636148 CSRNP3Q8WYN3 585 aa17.39■□□□□ 0.37
AMT-230ENST00000636148 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
AMT-230ENST00000636148 ATP1B4Q9UN42 357 aaPredicted RBP17.36■□□□□ 0.37
AMT-230ENST00000636148 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.36
AMT-230ENST00000636148 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
AMT-230ENST00000636148 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
AMT-230ENST00000636148 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
AMT-230ENST00000636148 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
AMT-230ENST00000636148 SOGA1O94964 1423 aa17.1■□□□□ 0.33
AMT-230ENST00000636148 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
AMT-230ENST00000636148 EEA1Q15075 1411 aa17.03■□□□□ 0.32
AMT-230ENST00000636148 FBLN2P98095 1184 aa17.03■□□□□ 0.32
AMT-230ENST00000636148 CCER1Q8TC90 406 aaPredicted RBP17.01■□□□□ 0.31
AMT-230ENST00000636148 P3H3Q8IVL6 736 aa17■□□□□ 0.31
AMT-230ENST00000636148 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.31
AMT-230ENST00000636148 KIF27Q86VH2 1401 aa16.95■□□□□ 0.3
AMT-230ENST00000636148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
AMT-230ENST00000636148 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
AMT-230ENST00000636148 ITGAEP38570 1179 aa16.93■□□□□ 0.3
AMT-230ENST00000636148 GOLGA3Q08378 1498 aa16.91■□□□□ 0.3
AMT-230ENST00000636148 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
AMT-230ENST00000636148 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
AMT-230ENST00000636148 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
AMT-230ENST00000636148 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
AMT-230ENST00000636148 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
AMT-230ENST00000636148 CUX2O14529 1486 aa16.87■□□□□ 0.29
AMT-230ENST00000636148 RUSC2Q8N2Y8 1516 aa16.87■□□□□ 0.29
AMT-230ENST00000636148 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
AMT-230ENST00000636148 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
AMT-230ENST00000636148 CLIP1P30622 1438 aa16.85■□□□□ 0.29
AMT-230ENST00000636148 TNIKQ9UKE5 1360 aa16.85■□□□□ 0.29
AMT-230ENST00000636148 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
AMT-230ENST00000636148 CFTRP13569 1480 aa16.82■□□□□ 0.28
AMT-230ENST00000636148 HRCP23327 699 aa16.81■□□□□ 0.28
AMT-230ENST00000636148 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
AMT-230ENST00000636148 ARID3CA6NKF2 412 aa16.78■□□□□ 0.28
AMT-230ENST00000636148 NESP48681 1621 aa16.77■□□□□ 0.28
AMT-230ENST00000636148 TDRD9Q8NDG6 1382 aaKnown RBP16.76■□□□□ 0.27
AMT-230ENST00000636148 CARMIL1Q5VZK9 1371 aa16.75■□□□□ 0.27
AMT-230ENST00000636148 CHMP7Q8WUX9 453 aaPredicted RBP16.72■□□□□ 0.27
AMT-230ENST00000636148 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
AMT-230ENST00000636148 FAM50AQ14320 339 aaKnown RBP16.71■□□□□ 0.27
AMT-230ENST00000636148 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
AMT-230ENST00000636148 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
AMT-230ENST00000636148 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
AMT-230ENST00000636148 CUX1P39880 1505 aa16.6■□□□□ 0.25
AMT-230ENST00000636148 IGF1RP08069 1367 aa16.56■□□□□ 0.24
AMT-230ENST00000636148 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
AMT-230ENST00000636148 TOPBP1Q92547 1522 aa16.49■□□□□ 0.23
AMT-230ENST00000636148 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
AMT-230ENST00000636148 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
AMT-230ENST00000636148 CDK11AQ9UQ88 783 aaPredicted RBP16.46■□□□□ 0.23
AMT-230ENST00000636148 MTUS2Q5JR59 1369 aa16.46■□□□□ 0.23
AMT-230ENST00000636148 LAMC3Q9Y6N6 1575 aa16.45■□□□□ 0.22
AMT-230ENST00000636148 GAPVD1Q14C86 1478 aa16.44■□□□□ 0.22
AMT-230ENST00000636148 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.228e-7■■■■□ 24.7
AMT-230ENST00000636148 MYT1LQ9UL68 1186 aa16.42■□□□□ 0.22
AMT-230ENST00000636148 KANK4Q5T7N3 995 aaPredicted RBP16.41■□□□□ 0.22
AMT-230ENST00000636148 ZNF777Q9ULD5 760 aaPredicted RBP16.4■□□□□ 0.22
AMT-230ENST00000636148 DNMBPQ6XZF7 1577 aa16.39■□□□□ 0.21
AMT-230ENST00000636148 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
AMT-230ENST00000636148 MRC2Q9UBG0 1479 aa16.38■□□□□ 0.21
AMT-230ENST00000636148 PRXQ9BXM0 1461 aa16.37■□□□□ 0.21
AMT-230ENST00000636148 TRIM52Q96A61 297 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms