RNA–Protein interactions for RNA: ENST00000637455.1

AMT-247, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-247ENST00000637455 NISCHQ9Y2I1 1504 aa39.65■■■■□ 3.94
AMT-247ENST00000637455 ABCC9O60706 1549 aa35.54■■■■□ 3.28
AMT-247ENST00000637455 CCDC180Q9P1Z9 1646 aa35.49■■■■□ 3.27
AMT-247ENST00000637455 RB1CC1Q8TDY2 1594 aa33.75■■■□□ 2.99
AMT-247ENST00000637455 NACADO15069 1562 aa33.52■■■□□ 2.96
AMT-247ENST00000637455 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
AMT-247ENST00000637455 DNAJC5BQ9UF47 199 aa33.37■■■□□ 2.93
AMT-247ENST00000637455 PABPN1Q86U42 306 aaKnown RBP eCLIP33.12■■■□□ 2.893e-6■■■■□ 23.3
AMT-247ENST00000637455 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
AMT-247ENST00000637455 MYO15BQ96JP2 1530 aa33.05■■■□□ 2.88
AMT-247ENST00000637455 BICRAQ9NZM4 1560 aa32.89■■■□□ 2.86
AMT-247ENST00000637455 ZCCHC6Q5VYS8 1495 aaKnown RBP32.88■■■□□ 2.85
AMT-247ENST00000637455 DCAF1Q9Y4B6 1507 aa32.68■■■□□ 2.82
AMT-247ENST00000637455 SCRIBQ14160 1630 aa32.45■■■□□ 2.78
AMT-247ENST00000637455 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
AMT-247ENST00000637455 CC2D2AQ9P2K1 1620 aa32.09■■■□□ 2.73
AMT-247ENST00000637455 EIF4G1Q04637 1599 aaKnown RBP32.02■■■□□ 2.72
AMT-247ENST00000637455 CECR2Q9BXF3 1484 aa31.96■■■□□ 2.71
AMT-247ENST00000637455 NCAPD3P42695 1498 aa30.98■■■□□ 2.55
AMT-247ENST00000637455 ATAD2BQ9ULI0 1458 aa30.94■■■□□ 2.54
AMT-247ENST00000637455 SMARCA4P51532 1647 aa30.92■■■□□ 2.54
AMT-247ENST00000637455 SMARCA2P51531 1590 aa30.77■■■□□ 2.52
AMT-247ENST00000637455 HMGXB3Q12766 1538 aa30.75■■■□□ 2.51
AMT-247ENST00000637455 BAZ1AQ9NRL2 1556 aaPredicted RBP30.72■■■□□ 2.51
AMT-247ENST00000637455 MROH2BQ7Z745 1585 aa30.61■■■□□ 2.49
AMT-247ENST00000637455 BAZ1BQ9UIG0 1483 aaKnown RBP30.6■■■□□ 2.49
AMT-247ENST00000637455 NESP48681 1621 aa30.6■■■□□ 2.49
AMT-247ENST00000637455 PEG3Q9GZU2 1588 aa30.59■■■□□ 2.49
AMT-247ENST00000637455 ERCC6Q03468 1493 aa30.58■■■□□ 2.49
AMT-247ENST00000637455 CUX2O14529 1486 aa30.48■■■□□ 2.47
AMT-247ENST00000637455 DNAJC5Q9H3Z4 198 aa30.45■■■□□ 2.47
AMT-247ENST00000637455 WIZO95785 1651 aa30.25■■■□□ 2.43
AMT-247ENST00000637455 LAMC3Q9Y6N6 1575 aa30.25■■■□□ 2.43
AMT-247ENST00000637455 THOC2Q8NI27 1593 aaKnown RBP30.22■■■□□ 2.43
AMT-247ENST00000637455 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
AMT-247ENST00000637455 PDS5BQ9NTI5 1447 aa30.04■■■□□ 2.4
AMT-247ENST00000637455 CADPSQ9ULU8 1353 aa30.04■■■□□ 2.4
AMT-247ENST00000637455 RSF1Q96T23 1441 aaPredicted RBP29.97■■■□□ 2.39
AMT-247ENST00000637455 MRC2Q9UBG0 1479 aa29.83■■■□□ 2.37
AMT-247ENST00000637455 TOP2AP11388 1531 aaKnown RBP29.8■■■□□ 2.36
AMT-247ENST00000637455 WDR62O43379 1518 aa29.78■■■□□ 2.36
AMT-247ENST00000637455 CFTRP13569 1480 aa29.73■■■□□ 2.35
AMT-247ENST00000637455 FANCD2Q9BXW9 1451 aa29.72■■■□□ 2.35
AMT-247ENST00000637455 CEP164Q9UPV0 1460 aa29.72■■■□□ 2.35
AMT-247ENST00000637455 URB2Q14146 1524 aaKnown RBP29.53■■■□□ 2.32
AMT-247ENST00000637455 CCDC88BA6NC98 1476 aa29.5■■■□□ 2.31
AMT-247ENST00000637455 PRDM2Q13029 1718 aa29.42■■■□□ 2.3
AMT-247ENST00000637455 TOPBP1Q92547 1522 aa29.18■■■□□ 2.26
AMT-247ENST00000637455 ZNF608Q9ULD9 1512 aaPredicted RBP29.18■■■□□ 2.26
AMT-247ENST00000637455 TRIM41Q8WV44 630 aa29.18■■■□□ 2.26
AMT-247ENST00000637455 OSCARQ8IYS5 282 aa29.1■■■□□ 2.25
AMT-247ENST00000637455 IFT140Q96RY7 1462 aa29.1■■■□□ 2.25
AMT-247ENST00000637455 DNMBPQ6XZF7 1577 aa29.06■■■□□ 2.24
AMT-247ENST00000637455 ABCC8Q09428 1581 aa28.99■■■□□ 2.23
AMT-247ENST00000637455 EIF4G3O43432 1585 aaKnown RBP28.97■■■□□ 2.23
AMT-247ENST00000637455 TARBP1Q13395 1621 aaKnown RBP28.95■■■□□ 2.22
AMT-247ENST00000637455 AQRO60306 1485 aaKnown RBP eCLIP28.9■■■□□ 2.228e-7■■■■□ 24.7
AMT-247ENST00000637455 POLA1P09884 1462 aaPredicted RBP28.9■■■□□ 2.22
AMT-247ENST00000637455 RAD54L2Q9Y4B4 1467 aa28.84■■■□□ 2.21
AMT-247ENST00000637455 RIMBP3CA6NJZ7 1639 aa28.81■■■□□ 2.2
AMT-247ENST00000637455 RIMBP3BA6NNM3 1639 aa28.81■■■□□ 2.2
AMT-247ENST00000637455 RIMBP3Q9UFD9 1639 aa28.81■■■□□ 2.2
AMT-247ENST00000637455 CHD1O14646 1710 aa28.76■■■□□ 2.19
AMT-247ENST00000637455 CUX1P39880 1505 aa28.74■■■□□ 2.19
AMT-247ENST00000637455 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
AMT-247ENST00000637455 SOGA1O94964 1423 aa28.73■■■□□ 2.19
AMT-247ENST00000637455 TDRD9Q8NDG6 1382 aaKnown RBP28.72■■■□□ 2.19
AMT-247ENST00000637455 ARHGEF11O15085 1522 aa28.72■■■□□ 2.19
AMT-247ENST00000637455 SUPT5HO00267 1087 aaKnown RBP28.7■■■□□ 2.19
AMT-247ENST00000637455 FBLN2P98095 1184 aa28.64■■■□□ 2.17
AMT-247ENST00000637455 SNAPC4Q5SXM2 1469 aa28.57■■■□□ 2.16
AMT-247ENST00000637455 WDR97A6NE52 1622 aa28.54■■■□□ 2.16
AMT-247ENST00000637455 CYB5RLQ6IPT4 315 aa28.49■■■□□ 2.15
AMT-247ENST00000637455 ARAP1Q96P48 1450 aa28.47■■■□□ 2.15
AMT-247ENST00000637455 GRIN2BQ13224 1484 aa28.45■■■□□ 2.15
AMT-247ENST00000637455 MAGI1Q96QZ7 1491 aaPredicted RBP28.42■■■□□ 2.14
AMT-247ENST00000637455 CLASP1Q7Z460 1538 aa28.41■■■□□ 2.14
AMT-247ENST00000637455 PBRM1Q86U86 1689 aa28.4■■■□□ 2.14
AMT-247ENST00000637455 CHMP7Q8WUX9 453 aaPredicted RBP28.38■■■□□ 2.13
AMT-247ENST00000637455 GAPVD1Q14C86 1478 aa28.38■■■□□ 2.13
AMT-247ENST00000637455 ABCA10Q8WWZ4 1543 aa28.37■■■□□ 2.13
AMT-247ENST00000637455 SYNJ2O15056 1496 aa28.36■■■□□ 2.13
AMT-247ENST00000637455 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
AMT-247ENST00000637455 SYNJ1O43426 1573 aa28.32■■■□□ 2.12
AMT-247ENST00000637455 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
AMT-247ENST00000637455 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
AMT-247ENST00000637455 WRNQ14191 1432 aaPredicted RBP eCLIP28.23■■■□□ 2.11
AMT-247ENST00000637455 ADAMTS12P58397 1594 aa28.14■■■□□ 2.09
AMT-247ENST00000637455 GRIN2AQ12879 1464 aa28.12■■■□□ 2.09
AMT-247ENST00000637455 TRHP20396 242 aaPredicted RBP28.11■■■□□ 2.09
AMT-247ENST00000637455 ERCC6L2Q5T890 1561 aa28.07■■■□□ 2.08
AMT-247ENST00000637455 CEP170Q5SW79 1584 aa28.07■■■□□ 2.08
AMT-247ENST00000637455 NUP160Q12769 1436 aa28.02■■■□□ 2.08
AMT-247ENST00000637455 FHAD1B1AJZ9 1412 aa27.99■■■□□ 2.07
AMT-247ENST00000637455 ERICH3Q5RHP9 1530 aa27.99■■■□□ 2.07
AMT-247ENST00000637455 SHROOM2Q13796 1616 aa27.91■■■□□ 2.06
AMT-247ENST00000637455 PRG4Q92954 1404 aaPredicted RBP27.75■■■□□ 2.03
AMT-247ENST00000637455 RUSC2Q8N2Y8 1516 aa27.74■■■□□ 2.03
AMT-247ENST00000637455 JPH4Q96JJ6 628 aa27.72■■■□□ 2.03
AMT-247ENST00000637455 IGF1RP08069 1367 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms