RNA–Protein interactions for RNA: ENST00000637291.1

AMT-246, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-246ENST00000637291 NISCHQ9Y2I1 1504 aa30.76■■■□□ 2.51
AMT-246ENST00000637291 CCDC180Q9P1Z9 1646 aa26.23■■□□□ 1.79
AMT-246ENST00000637291 SHROOM4Q9ULL8 1493 aa26.21■■□□□ 1.79
AMT-246ENST00000637291 ZCCHC6Q5VYS8 1495 aaKnown RBP26.12■■□□□ 1.77
AMT-246ENST00000637291 SUPT5HO00267 1087 aaKnown RBP25.9■■□□□ 1.74
AMT-246ENST00000637291 CHIC1Q5VXU3 224 aa25.53■■□□□ 1.68
AMT-246ENST00000637291 MYO15BQ96JP2 1530 aa25.51■■□□□ 1.67
AMT-246ENST00000637291 HRCP23327 699 aa25.42■■□□□ 1.66
AMT-246ENST00000637291 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
AMT-246ENST00000637291 PELP1Q8IZL8 1130 aaKnown RBP25.23■■□□□ 1.63
AMT-246ENST00000637291 DCAF8L2P0C7V8 631 aa25.04■■□□□ 1.6
AMT-246ENST00000637291 PCGF6Q9BYE7 350 aa24.99■■□□□ 1.59
AMT-246ENST00000637291 MYT1Q01538 1121 aa24.97■■□□□ 1.59
AMT-246ENST00000637291 ABCC9O60706 1549 aa24.75■■□□□ 1.55
AMT-246ENST00000637291 LOC105371045A0A1W2PR82 267 aa24.66■■□□□ 1.54
AMT-246ENST00000637291 PPARGC1BQ86YN6 1023 aaKnown RBP24.64■■□□□ 1.54
AMT-246ENST00000637291 TRIM26Q12899 539 aaPredicted RBP24.58■■□□□ 1.53
AMT-246ENST00000637291 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.51
AMT-246ENST00000637291 NACADO15069 1562 aa24.39■■□□□ 1.5
AMT-246ENST00000637291 RB1CC1Q8TDY2 1594 aa24.3■■□□□ 1.48
AMT-246ENST00000637291 ZEB1P37275 1124 aaPredicted RBP24.29■■□□□ 1.48
AMT-246ENST00000637291 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
AMT-246ENST00000637291 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
AMT-246ENST00000637291 TTBK1Q5TCY1 1321 aaPredicted RBP24.18■■□□□ 1.46
AMT-246ENST00000637291 PRKCSHP14314 528 aaPredicted RBP24.02■■□□□ 1.44
AMT-246ENST00000637291 SLC24A1O60721 1099 aa23.9■■□□□ 1.42
AMT-246ENST00000637291 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
AMT-246ENST00000637291 MROH2BQ7Z745 1585 aa23.87■■□□□ 1.41
AMT-246ENST00000637291 FAM9AQ8IZU1 332 aaPredicted RBP23.87■■□□□ 1.41
AMT-246ENST00000637291 UNC13AQ9UPW8 1703 aa23.82■■□□□ 1.4
AMT-246ENST00000637291 WIZO95785 1651 aa23.74■■□□□ 1.39
AMT-246ENST00000637291 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
AMT-246ENST00000637291 BAZ1AQ9NRL2 1556 aaPredicted RBP23.73■■□□□ 1.39
AMT-246ENST00000637291 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
AMT-246ENST00000637291 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
AMT-246ENST00000637291 WRNQ14191 1432 aaPredicted RBP eCLIP23.51■■□□□ 1.35
AMT-246ENST00000637291 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
AMT-246ENST00000637291 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
AMT-246ENST00000637291 APLP2Q06481 763 aa23.41■■□□□ 1.34
AMT-246ENST00000637291 CCER1Q8TC90 406 aaPredicted RBP23.38■■□□□ 1.33
AMT-246ENST00000637291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.37■■□□□ 1.33
AMT-246ENST00000637291 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
AMT-246ENST00000637291 SMARCA4P51532 1647 aa23.34■■□□□ 1.33
AMT-246ENST00000637291 SMARCA2P51531 1590 aa23.33■■□□□ 1.33
AMT-246ENST00000637291 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.32
AMT-246ENST00000637291 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
AMT-246ENST00000637291 TNIKQ9UKE5 1360 aa23.3■■□□□ 1.32
AMT-246ENST00000637291 EEA1Q15075 1411 aa23.3■■□□□ 1.32
AMT-246ENST00000637291 ACIN1Q9UKV3 1341 aaKnown RBP23.29■■□□□ 1.32
AMT-246ENST00000637291 CEP162Q5TB80 1403 aa23.29■■□□□ 1.32
AMT-246ENST00000637291 PABPN1Q86U42 306 aaKnown RBP eCLIP23.2■■□□□ 1.33e-6■■■■□ 23.3
AMT-246ENST00000637291 SOGA1O94964 1423 aa23.18■■□□□ 1.3
AMT-246ENST00000637291 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
AMT-246ENST00000637291 NEUROD1Q13562 356 aa23.16■■□□□ 1.3
AMT-246ENST00000637291 CSRNP3Q8WYN3 585 aa23.12■■□□□ 1.29
AMT-246ENST00000637291 CENPBP07199 599 aaPredicted RBP23.1■■□□□ 1.29
AMT-246ENST00000637291 GOLGA3Q08378 1498 aa23.08■■□□□ 1.29
AMT-246ENST00000637291 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
AMT-246ENST00000637291 BCL11AQ9H165 835 aa23.01■■□□□ 1.27
AMT-246ENST00000637291 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
AMT-246ENST00000637291 ZNF316A6NFI3 1004 aaPredicted RBP22.96■■□□□ 1.27
AMT-246ENST00000637291 GTF3C3Q9Y5Q9 886 aa22.95■■□□□ 1.26
AMT-246ENST00000637291 UBTFP17480 764 aaKnown RBP22.95■■□□□ 1.26
AMT-246ENST00000637291 KIF21BO75037 1637 aa22.94■■□□□ 1.26
AMT-246ENST00000637291 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
AMT-246ENST00000637291 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
AMT-246ENST00000637291 SYNJ1O43426 1573 aa22.82■■□□□ 1.24
AMT-246ENST00000637291 CLIP1P30622 1438 aa22.78■■□□□ 1.24
AMT-246ENST00000637291 VPS8Q8N3P4 1428 aa22.78■■□□□ 1.24
AMT-246ENST00000637291 DAXXQ9UER7 740 aaPredicted RBP22.67■■□□□ 1.22
AMT-246ENST00000637291 ATAD2BQ9ULI0 1458 aa22.63■■□□□ 1.21
AMT-246ENST00000637291 HNRNPUL2Q1KMD3 747 aaKnown RBP22.63■■□□□ 1.21
AMT-246ENST00000637291 RAPGEF2Q9Y4G8 1499 aa22.62■■□□□ 1.21
AMT-246ENST00000637291 MIER1Q8N108 512 aa22.61■■□□□ 1.21
AMT-246ENST00000637291 CLSPNQ9HAW4 1339 aa22.58■■□□□ 1.21
AMT-246ENST00000637291 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
AMT-246ENST00000637291 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.2
AMT-246ENST00000637291 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
AMT-246ENST00000637291 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
AMT-246ENST00000637291 CC2D2AQ9P2K1 1620 aa22.49■■□□□ 1.19
AMT-246ENST00000637291 HMGXB3Q12766 1538 aa22.48■■□□□ 1.19
AMT-246ENST00000637291 PRXQ9BXM0 1461 aa22.45■■□□□ 1.19
AMT-246ENST00000637291 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
AMT-246ENST00000637291 DHX57Q6P158 1386 aaKnown RBP22.42■■□□□ 1.18
AMT-246ENST00000637291 ARAP1Q96P48 1450 aa22.41■■□□□ 1.18
AMT-246ENST00000637291 RRBP1Q9P2E9 1410 aaKnown RBP22.35■■□□□ 1.17
AMT-246ENST00000637291 CUX2O14529 1486 aa22.34■■□□□ 1.17
AMT-246ENST00000637291 KANK4Q5T7N3 995 aaPredicted RBP22.23■■□□□ 1.15
AMT-246ENST00000637291 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
AMT-246ENST00000637291 CUX1P39880 1505 aa22.21■■□□□ 1.15
AMT-246ENST00000637291 RANGAP1P46060 587 aaPredicted RBP22.21■■□□□ 1.15
AMT-246ENST00000637291 CCNB3Q8WWL7 1395 aa22.16■■□□□ 1.14
AMT-246ENST00000637291 ARHGAP35Q9NRY4 1499 aa22.15■■□□□ 1.14
AMT-246ENST00000637291 EIF5BO60841 1220 aaKnown RBP22.11■■□□□ 1.13
AMT-246ENST00000637291 MAP3K1Q13233 1512 aa22.11■■□□□ 1.13
AMT-246ENST00000637291 CFTRP13569 1480 aa22.08■■□□□ 1.13
AMT-246ENST00000637291 SUPT16HQ9Y5B9 1047 aaKnown RBP22.08■■□□□ 1.13
AMT-246ENST00000637291 MAPKBP1O60336 1514 aa22.01■■□□□ 1.11
AMT-246ENST00000637291 TIAM1Q13009 1591 aa22■■□□□ 1.11
AMT-246ENST00000637291 PRDM2Q13029 1718 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms