RNA–Protein interactions for RNA: ENST00000635798.1

AMT-223, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 1,276 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-223ENST00000635798 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
AMT-223ENST00000635798 ABCC9O60706 1549 aa26.41■■□□□ 1.82
AMT-223ENST00000635798 CCDC180Q9P1Z9 1646 aa25.59■■□□□ 1.69
AMT-223ENST00000635798 DNAJC5BQ9UF47 199 aa25.59■■□□□ 1.69
AMT-223ENST00000635798 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
AMT-223ENST00000635798 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.493e-6■■■■□ 23.3
AMT-223ENST00000635798 UNC13AQ9UPW8 1703 aa24.36■■□□□ 1.49
AMT-223ENST00000635798 NACADO15069 1562 aa24.34■■□□□ 1.49
AMT-223ENST00000635798 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
AMT-223ENST00000635798 BICRAQ9NZM4 1560 aa24.1■■□□□ 1.45
AMT-223ENST00000635798 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
AMT-223ENST00000635798 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
AMT-223ENST00000635798 CC2D2AQ9P2K1 1620 aa23.87■■□□□ 1.41
AMT-223ENST00000635798 MYO15BQ96JP2 1530 aa23.67■■□□□ 1.38
AMT-223ENST00000635798 SHROOM4Q9ULL8 1493 aa23.61■■□□□ 1.37
AMT-223ENST00000635798 EIF4G1Q04637 1599 aaKnown RBP23.56■■□□□ 1.36
AMT-223ENST00000635798 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
AMT-223ENST00000635798 CUX2O14529 1486 aa23.15■■□□□ 1.3
AMT-223ENST00000635798 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
AMT-223ENST00000635798 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
AMT-223ENST00000635798 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
AMT-223ENST00000635798 TRIM41Q8WV44 630 aa22.72■■□□□ 1.23
AMT-223ENST00000635798 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
AMT-223ENST00000635798 THOC2Q8NI27 1593 aaKnown RBP22.45■■□□□ 1.18
AMT-223ENST00000635798 NESP48681 1621 aa22.44■■□□□ 1.18
AMT-223ENST00000635798 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
AMT-223ENST00000635798 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
AMT-223ENST00000635798 KIF21AQ7Z4S6 1674 aa22.23■■□□□ 1.15
AMT-223ENST00000635798 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
AMT-223ENST00000635798 LAMC3Q9Y6N6 1575 aa22.14■■□□□ 1.13
AMT-223ENST00000635798 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
AMT-223ENST00000635798 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
AMT-223ENST00000635798 BAZ1BQ9UIG0 1483 aaKnown RBP21.99■■□□□ 1.11
AMT-223ENST00000635798 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
AMT-223ENST00000635798 OSCARQ8IYS5 282 aa21.89■■□□□ 1.09
AMT-223ENST00000635798 WDR62O43379 1518 aa21.89■■□□□ 1.09
AMT-223ENST00000635798 MRC2Q9UBG0 1479 aa21.88■■□□□ 1.09
AMT-223ENST00000635798 PEG3Q9GZU2 1588 aa21.83■■□□□ 1.09
AMT-223ENST00000635798 RIMBP3CA6NJZ7 1639 aa21.83■■□□□ 1.08
AMT-223ENST00000635798 RIMBP3BA6NNM3 1639 aa21.83■■□□□ 1.08
AMT-223ENST00000635798 RIMBP3Q9UFD9 1639 aa21.83■■□□□ 1.08
AMT-223ENST00000635798 CADPSQ9ULU8 1353 aa21.7■■□□□ 1.06
AMT-223ENST00000635798 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
AMT-223ENST00000635798 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
AMT-223ENST00000635798 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
AMT-223ENST00000635798 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
AMT-223ENST00000635798 TRHP20396 242 aaPredicted RBP21.51■■□□□ 1.03
AMT-223ENST00000635798 FANCD2Q9BXW9 1451 aa21.48■■□□□ 1.03
AMT-223ENST00000635798 CYB5RLQ6IPT4 315 aa21.45■■□□□ 1.02
AMT-223ENST00000635798 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.01
AMT-223ENST00000635798 ARAP1Q96P48 1450 aa21.32■■□□□ 1
AMT-223ENST00000635798 WIZO95785 1651 aa21.29■■□□□ 1
AMT-223ENST00000635798 CFTRP13569 1480 aa21.27■■□□□ 1
AMT-223ENST00000635798 ZNF608Q9ULD9 1512 aaPredicted RBP21.27■■□□□ 1
AMT-223ENST00000635798 CHD1O14646 1710 aa21.26■□□□□ 0.99
AMT-223ENST00000635798 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
AMT-223ENST00000635798 PRDM2Q13029 1718 aa21.18■□□□□ 0.98
AMT-223ENST00000635798 EIF4G3O43432 1585 aaKnown RBP21.16■□□□□ 0.98
AMT-223ENST00000635798 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
AMT-223ENST00000635798 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
AMT-223ENST00000635798 FBLN2P98095 1184 aa20.95■□□□□ 0.94
AMT-223ENST00000635798 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.948e-7■■■■□ 22.8
AMT-223ENST00000635798 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
AMT-223ENST00000635798 TOP2AP11388 1531 aaKnown RBP20.9■□□□□ 0.94
AMT-223ENST00000635798 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.94
AMT-223ENST00000635798 ABCC8Q09428 1581 aa20.86■□□□□ 0.93
AMT-223ENST00000635798 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
AMT-223ENST00000635798 ILDR1Q86SU0 546 aaPredicted RBP20.82■□□□□ 0.92
AMT-223ENST00000635798 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
AMT-223ENST00000635798 SNAPC4Q5SXM2 1469 aa20.71■□□□□ 0.91
AMT-223ENST00000635798 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
AMT-223ENST00000635798 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
AMT-223ENST00000635798 KIF13AQ9H1H9 1805 aa20.67■□□□□ 0.9
AMT-223ENST00000635798 CCDC88BA6NC98 1476 aa20.65■□□□□ 0.9
AMT-223ENST00000635798 RAD54L2Q9Y4B4 1467 aa20.64■□□□□ 0.89
AMT-223ENST00000635798 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
AMT-223ENST00000635798 CHMP7Q8WUX9 453 aaPredicted RBP20.64■□□□□ 0.89
AMT-223ENST00000635798 WDR97A6NE52 1622 aa20.63■□□□□ 0.89
AMT-223ENST00000635798 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
AMT-223ENST00000635798 SOGA1O94964 1423 aa20.56■□□□□ 0.88
AMT-223ENST00000635798 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
AMT-223ENST00000635798 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
AMT-223ENST00000635798 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
AMT-223ENST00000635798 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
AMT-223ENST00000635798 KDM4FA0A1W2PPD8 638 aa20.47■□□□□ 0.87
AMT-223ENST00000635798 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.86
AMT-223ENST00000635798 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
AMT-223ENST00000635798 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
AMT-223ENST00000635798 KDM6BO15054 1643 aa20.32■□□□□ 0.84
AMT-223ENST00000635798 SHROOM2Q13796 1616 aa20.32■□□□□ 0.84
AMT-223ENST00000635798 CUX1P39880 1505 aa20.29■□□□□ 0.84
AMT-223ENST00000635798 ABCC10Q5T3U5 1492 aa20.27■□□□□ 0.84
AMT-223ENST00000635798 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.83
AMT-223ENST00000635798 GRIN2AQ12879 1464 aa20.26■□□□□ 0.83
AMT-223ENST00000635798 TSPOAP1O95153 1857 aa20.26■□□□□ 0.83
AMT-223ENST00000635798 FAM69CQ0P6D2 419 aa20.25■□□□□ 0.83
AMT-223ENST00000635798 DIP2BQ9P265 1576 aa20.25■□□□□ 0.83
AMT-223ENST00000635798 NUP160Q12769 1436 aa20.21■□□□□ 0.83
AMT-223ENST00000635798 MAPKBP1O60336 1514 aa20.18■□□□□ 0.82
AMT-223ENST00000635798 HECW2Q9P2P5 1572 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms