RNA–Protein interactions for RNA: ENST00000273588.8

AMT-201, Transcript of aminomethyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AMT, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-201ENST00000273588 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
AMT-201ENST00000273588 CCDC180Q9P1Z9 1646 aa26.9■■□□□ 1.9
AMT-201ENST00000273588 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
AMT-201ENST00000273588 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
AMT-201ENST00000273588 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
AMT-201ENST00000273588 DCAF1Q9Y4B6 1507 aa25.69■■□□□ 1.7
AMT-201ENST00000273588 ABCC9O60706 1549 aa25.43■■□□□ 1.66
AMT-201ENST00000273588 MYO15BQ96JP2 1530 aa25.21■■□□□ 1.63
AMT-201ENST00000273588 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
AMT-201ENST00000273588 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
AMT-201ENST00000273588 NACADO15069 1562 aa25.03■■□□□ 1.6
AMT-201ENST00000273588 RB1CC1Q8TDY2 1594 aa24.75■■□□□ 1.55
AMT-201ENST00000273588 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
AMT-201ENST00000273588 CECR2Q9BXF3 1484 aa24.41■■□□□ 1.5
AMT-201ENST00000273588 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
AMT-201ENST00000273588 CHIC1Q5VXU3 224 aa24.26■■□□□ 1.47
AMT-201ENST00000273588 MROH2BQ7Z745 1585 aa24.25■■□□□ 1.47
AMT-201ENST00000273588 PABPN1Q86U42 306 aaKnown RBP eCLIP24.17■■□□□ 1.463e-6■■■■□ 23.3
AMT-201ENST00000273588 BICRAQ9NZM4 1560 aa24.13■■□□□ 1.45
AMT-201ENST00000273588 WIZO95785 1651 aa24.08■■□□□ 1.44
AMT-201ENST00000273588 BAZ1AQ9NRL2 1556 aaPredicted RBP24.04■■□□□ 1.44
AMT-201ENST00000273588 SMARCA4P51532 1647 aa23.93■■□□□ 1.42
AMT-201ENST00000273588 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
AMT-201ENST00000273588 CCDC88BA6NC98 1476 aa23.59■■□□□ 1.37
AMT-201ENST00000273588 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
AMT-201ENST00000273588 SMARCA2P51531 1590 aa23.56■■□□□ 1.36
AMT-201ENST00000273588 PEG3Q9GZU2 1588 aa23.55■■□□□ 1.36
AMT-201ENST00000273588 ATAD2BQ9ULI0 1458 aa23.5■■□□□ 1.35
AMT-201ENST00000273588 EIF4G1Q04637 1599 aaKnown RBP23.49■■□□□ 1.35
AMT-201ENST00000273588 LOC105371045A0A1W2PR82 267 aa23.48■■□□□ 1.35
AMT-201ENST00000273588 BAZ1BQ9UIG0 1483 aaKnown RBP23.35■■□□□ 1.33
AMT-201ENST00000273588 FAM9AQ8IZU1 332 aaPredicted RBP23.3■■□□□ 1.32
AMT-201ENST00000273588 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
AMT-201ENST00000273588 NCAPD3P42695 1498 aa23.18■■□□□ 1.3
AMT-201ENST00000273588 HMGXB3Q12766 1538 aa23.1■■□□□ 1.29
AMT-201ENST00000273588 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.29
AMT-201ENST00000273588 WRNQ14191 1432 aaPredicted RBP eCLIP22.97■■□□□ 1.27
AMT-201ENST00000273588 CC2D2AQ9P2K1 1620 aa22.94■■□□□ 1.26
AMT-201ENST00000273588 SOGA1O94964 1423 aa22.93■■□□□ 1.26
AMT-201ENST00000273588 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
AMT-201ENST00000273588 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
AMT-201ENST00000273588 HRCP23327 699 aa22.85■■□□□ 1.25
AMT-201ENST00000273588 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
AMT-201ENST00000273588 CFTRP13569 1480 aa22.78■■□□□ 1.24
AMT-201ENST00000273588 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
AMT-201ENST00000273588 TOP2BQ02880 1626 aa22.69■■□□□ 1.22
AMT-201ENST00000273588 EEA1Q15075 1411 aa22.69■■□□□ 1.22
AMT-201ENST00000273588 CADPSQ9ULU8 1353 aa22.65■■□□□ 1.22
AMT-201ENST00000273588 CUX1P39880 1505 aa22.63■■□□□ 1.21
AMT-201ENST00000273588 BIVM-ERCC5R4GMW8 1640 aa22.62■■□□□ 1.21
AMT-201ENST00000273588 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
AMT-201ENST00000273588 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
AMT-201ENST00000273588 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
AMT-201ENST00000273588 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
AMT-201ENST00000273588 TRIM26Q12899 539 aaPredicted RBP22.48■■□□□ 1.19
AMT-201ENST00000273588 GOLGA3Q08378 1498 aa22.48■■□□□ 1.19
AMT-201ENST00000273588 NESP48681 1621 aa22.48■■□□□ 1.19
AMT-201ENST00000273588 CEP162Q5TB80 1403 aa22.47■■□□□ 1.19
AMT-201ENST00000273588 CEP164Q9UPV0 1460 aa22.43■■□□□ 1.18
AMT-201ENST00000273588 KIF21BO75037 1637 aa22.43■■□□□ 1.18
AMT-201ENST00000273588 PPARGC1BQ86YN6 1023 aaKnown RBP22.42■■□□□ 1.18
AMT-201ENST00000273588 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
AMT-201ENST00000273588 RAPGEF2Q9Y4G8 1499 aa22.4■■□□□ 1.18
AMT-201ENST00000273588 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
AMT-201ENST00000273588 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
AMT-201ENST00000273588 PRXQ9BXM0 1461 aa22.29■■□□□ 1.16
AMT-201ENST00000273588 LAMC3Q9Y6N6 1575 aa22.27■■□□□ 1.16
AMT-201ENST00000273588 CUX2O14529 1486 aa22.24■■□□□ 1.15
AMT-201ENST00000273588 RANGAP1P46060 587 aaPredicted RBP22.22■■□□□ 1.15
AMT-201ENST00000273588 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
AMT-201ENST00000273588 DNMBPQ6XZF7 1577 aa22.2■■□□□ 1.14
AMT-201ENST00000273588 CLIP1P30622 1438 aa22.2■■□□□ 1.14
AMT-201ENST00000273588 ERICH3Q5RHP9 1530 aa22.19■■□□□ 1.14
AMT-201ENST00000273588 IGF1RP08069 1367 aa22.19■■□□□ 1.14
AMT-201ENST00000273588 RAD54L2Q9Y4B4 1467 aa22.17■■□□□ 1.14
AMT-201ENST00000273588 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
AMT-201ENST00000273588 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
AMT-201ENST00000273588 TTBK1Q5TCY1 1321 aaPredicted RBP22.15■■□□□ 1.14
AMT-201ENST00000273588 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
AMT-201ENST00000273588 KIF21AQ7Z4S6 1674 aa22.09■■□□□ 1.13
AMT-201ENST00000273588 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
AMT-201ENST00000273588 CARMIL1Q5VZK9 1371 aa22.04■■□□□ 1.12
AMT-201ENST00000273588 VPS8Q8N3P4 1428 aa22.02■■□□□ 1.12
AMT-201ENST00000273588 ZEB1P37275 1124 aaPredicted RBP21.98■■□□□ 1.11
AMT-201ENST00000273588 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
AMT-201ENST00000273588 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
AMT-201ENST00000273588 WDR97A6NE52 1622 aa21.92■■□□□ 1.1
AMT-201ENST00000273588 ARHGAP35Q9NRY4 1499 aa21.89■■□□□ 1.1
AMT-201ENST00000273588 ABCA5Q8WWZ7 1642 aa21.84■■□□□ 1.09
AMT-201ENST00000273588 MRC2Q9UBG0 1479 aa21.83■■□□□ 1.09
AMT-201ENST00000273588 TARBP1Q13395 1621 aaKnown RBP21.83■■□□□ 1.09
AMT-201ENST00000273588 GAPVD1Q14C86 1478 aa21.82■■□□□ 1.08
AMT-201ENST00000273588 APLP2Q06481 763 aa21.82■■□□□ 1.08
AMT-201ENST00000273588 CUL7Q14999 1698 aa21.79■■□□□ 1.08
AMT-201ENST00000273588 KANK4Q5T7N3 995 aaPredicted RBP21.75■■□□□ 1.07
AMT-201ENST00000273588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
AMT-201ENST00000273588 P3H3Q8IVL6 736 aa21.73■■□□□ 1.07
AMT-201ENST00000273588 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.078e-7■■■■□ 24.7
AMT-201ENST00000273588 WDR62O43379 1518 aa21.69■■□□□ 1.06
AMT-201ENST00000273588 ERCC6Q03468 1493 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms