RNA–Protein interactions for RNA: ENST00000636725.1

AMT-237, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,677 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-237ENST00000636725 NISCHQ9Y2I1 1504 aa30.8■■■□□ 2.52
AMT-237ENST00000636725 CCDC180Q9P1Z9 1646 aa27.04■■□□□ 1.92
AMT-237ENST00000636725 ABCC9O60706 1549 aa25.94■■□□□ 1.74
AMT-237ENST00000636725 ZCCHC6Q5VYS8 1495 aaKnown RBP25.8■■□□□ 1.72
AMT-237ENST00000636725 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
AMT-237ENST00000636725 DCAF1Q9Y4B6 1507 aa25.43■■□□□ 1.66
AMT-237ENST00000636725 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
AMT-237ENST00000636725 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
AMT-237ENST00000636725 NACADO15069 1562 aa25.25■■□□□ 1.63
AMT-237ENST00000636725 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
AMT-237ENST00000636725 SCRIBQ14160 1630 aa24.85■■□□□ 1.57
AMT-237ENST00000636725 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
AMT-237ENST00000636725 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
AMT-237ENST00000636725 BICRAQ9NZM4 1560 aa24.44■■□□□ 1.5
AMT-237ENST00000636725 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.493e-6■■■■□ 23.3
AMT-237ENST00000636725 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
AMT-237ENST00000636725 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
AMT-237ENST00000636725 MROH2BQ7Z745 1585 aa23.81■■□□□ 1.4
AMT-237ENST00000636725 BAZ1AQ9NRL2 1556 aaPredicted RBP23.8■■□□□ 1.4
AMT-237ENST00000636725 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
AMT-237ENST00000636725 RSF1Q96T23 1441 aaPredicted RBP23.74■■□□□ 1.39
AMT-237ENST00000636725 EIF4G1Q04637 1599 aaKnown RBP23.71■■□□□ 1.39
AMT-237ENST00000636725 WIZO95785 1651 aa23.61■■□□□ 1.37
AMT-237ENST00000636725 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
AMT-237ENST00000636725 CC2D2AQ9P2K1 1620 aa23.47■■□□□ 1.35
AMT-237ENST00000636725 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
AMT-237ENST00000636725 SMARCA2P51531 1590 aa23.42■■□□□ 1.34
AMT-237ENST00000636725 TOP2AP11388 1531 aaKnown RBP23.31■■□□□ 1.32
AMT-237ENST00000636725 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
AMT-237ENST00000636725 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
AMT-237ENST00000636725 HMGXB3Q12766 1538 aa23.25■■□□□ 1.31
AMT-237ENST00000636725 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
AMT-237ENST00000636725 HRCP23327 699 aa23.24■■□□□ 1.31
AMT-237ENST00000636725 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
AMT-237ENST00000636725 CCDC88BA6NC98 1476 aa23.07■■□□□ 1.28
AMT-237ENST00000636725 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
AMT-237ENST00000636725 PELP1Q8IZL8 1130 aaKnown RBP23■■□□□ 1.27
AMT-237ENST00000636725 PCGF6Q9BYE7 350 aa22.92■■□□□ 1.26
AMT-237ENST00000636725 FAM9AQ8IZU1 332 aaPredicted RBP22.8■■□□□ 1.24
AMT-237ENST00000636725 CFTRP13569 1480 aa22.69■■□□□ 1.22
AMT-237ENST00000636725 CADPSQ9ULU8 1353 aa22.68■■□□□ 1.22
AMT-237ENST00000636725 NESP48681 1621 aa22.67■■□□□ 1.22
AMT-237ENST00000636725 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
AMT-237ENST00000636725 PRDM2Q13029 1718 aa22.59■■□□□ 1.21
AMT-237ENST00000636725 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
AMT-237ENST00000636725 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
AMT-237ENST00000636725 PPARGC1BQ86YN6 1023 aaKnown RBP22.54■■□□□ 1.2
AMT-237ENST00000636725 ABCC8Q09428 1581 aa22.54■■□□□ 1.2
AMT-237ENST00000636725 FANCD2Q9BXW9 1451 aa22.45■■□□□ 1.18
AMT-237ENST00000636725 KIF21AQ7Z4S6 1674 aa22.41■■□□□ 1.18
AMT-237ENST00000636725 PDS5BQ9NTI5 1447 aa22.39■■□□□ 1.18
AMT-237ENST00000636725 WRNQ14191 1432 aaPredicted RBP eCLIP22.34■■□□□ 1.17
AMT-237ENST00000636725 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
AMT-237ENST00000636725 SYNJ1O43426 1573 aa22.32■■□□□ 1.16
AMT-237ENST00000636725 CUX1P39880 1505 aa22.28■■□□□ 1.16
AMT-237ENST00000636725 SOGA1O94964 1423 aa22.27■■□□□ 1.16
AMT-237ENST00000636725 MYT1Q01538 1121 aa22.25■■□□□ 1.15
AMT-237ENST00000636725 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
AMT-237ENST00000636725 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
AMT-237ENST00000636725 BIVM-ERCC5R4GMW8 1640 aa22.23■■□□□ 1.15
AMT-237ENST00000636725 URB2Q14146 1524 aaKnown RBP22.22■■□□□ 1.15
AMT-237ENST00000636725 EEA1Q15075 1411 aa22.21■■□□□ 1.15
AMT-237ENST00000636725 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
AMT-237ENST00000636725 RUSC2Q8N2Y8 1516 aa22.17■■□□□ 1.14
AMT-237ENST00000636725 TOPBP1Q92547 1522 aa22.17■■□□□ 1.14
AMT-237ENST00000636725 MRC2Q9UBG0 1479 aa22.16■■□□□ 1.14
AMT-237ENST00000636725 CSRNP3Q8WYN3 585 aa22.15■■□□□ 1.14
AMT-237ENST00000636725 THOC2Q8NI27 1593 aaKnown RBP22.13■■□□□ 1.13
AMT-237ENST00000636725 TNIKQ9UKE5 1360 aa22.1■■□□□ 1.13
AMT-237ENST00000636725 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
AMT-237ENST00000636725 CEP162Q5TB80 1403 aa22.08■■□□□ 1.13
AMT-237ENST00000636725 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
AMT-237ENST00000636725 WDR62O43379 1518 aa22.07■■□□□ 1.12
AMT-237ENST00000636725 ZEB1P37275 1124 aaPredicted RBP22.04■■□□□ 1.12
AMT-237ENST00000636725 POLA1P09884 1462 aaPredicted RBP22.04■■□□□ 1.12
AMT-237ENST00000636725 GOLGA3Q08378 1498 aa22.02■■□□□ 1.12
AMT-237ENST00000636725 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
AMT-237ENST00000636725 RAD54L2Q9Y4B4 1467 aa21.98■■□□□ 1.11
AMT-237ENST00000636725 CUX2O14529 1486 aa21.93■■□□□ 1.1
AMT-237ENST00000636725 KIF21BO75037 1637 aa21.92■■□□□ 1.1
AMT-237ENST00000636725 TARBP1Q13395 1621 aaKnown RBP21.89■■□□□ 1.1
AMT-237ENST00000636725 WDR97A6NE52 1622 aa21.88■■□□□ 1.09
AMT-237ENST00000636725 ABCA10Q8WWZ4 1543 aa21.86■■□□□ 1.09
AMT-237ENST00000636725 IFT140Q96RY7 1462 aa21.81■■□□□ 1.08
AMT-237ENST00000636725 KIF27Q86VH2 1401 aa21.79■■□□□ 1.08
AMT-237ENST00000636725 TTBK1Q5TCY1 1321 aaPredicted RBP21.78■■□□□ 1.08
AMT-237ENST00000636725 TDRD9Q8NDG6 1382 aaKnown RBP21.78■■□□□ 1.08
AMT-237ENST00000636725 ZNF608Q9ULD9 1512 aaPredicted RBP21.77■■□□□ 1.07
AMT-237ENST00000636725 RAPGEF2Q9Y4G8 1499 aa21.76■■□□□ 1.07
AMT-237ENST00000636725 ABCA5Q8WWZ7 1642 aa21.75■■□□□ 1.07
AMT-237ENST00000636725 CLIP1P30622 1438 aa21.73■■□□□ 1.07
AMT-237ENST00000636725 AQRO60306 1485 aaKnown RBP eCLIP21.72■■□□□ 1.078e-7■■■■□ 24.7
AMT-237ENST00000636725 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
AMT-237ENST00000636725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
AMT-237ENST00000636725 EIF4G3O43432 1585 aaKnown RBP21.69■■□□□ 1.06
AMT-237ENST00000636725 IGF1RP08069 1367 aa21.66■■□□□ 1.06
AMT-237ENST00000636725 PBRM1Q86U86 1689 aa21.65■■□□□ 1.06
AMT-237ENST00000636725 CCER1Q8TC90 406 aaPredicted RBP21.64■■□□□ 1.06
AMT-237ENST00000636725 VPS8Q8N3P4 1428 aa21.62■■□□□ 1.05
AMT-237ENST00000636725 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms