RNA–Protein interactions for RNA: ENST00000637914.1

AMT-253, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 3,677 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-253ENST00000637914 NISCHQ9Y2I1 1504 aa23.83■■□□□ 1.41
AMT-253ENST00000637914 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
AMT-253ENST00000637914 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
AMT-253ENST00000637914 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
AMT-253ENST00000637914 MYO15BQ96JP2 1530 aa20.03■□□□□ 0.8
AMT-253ENST00000637914 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
AMT-253ENST00000637914 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
AMT-253ENST00000637914 HRCP23327 699 aa19.81■□□□□ 0.76
AMT-253ENST00000637914 DCAF1Q9Y4B6 1507 aa19.63■□□□□ 0.73
AMT-253ENST00000637914 PCGF6Q9BYE7 350 aa19.41■□□□□ 0.7
AMT-253ENST00000637914 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
AMT-253ENST00000637914 ABCC9O60706 1549 aa19.25■□□□□ 0.67
AMT-253ENST00000637914 LOC105371045A0A1W2PR82 267 aa19.17■□□□□ 0.66
AMT-253ENST00000637914 DCAF8L2P0C7V8 631 aa19.16■□□□□ 0.66
AMT-253ENST00000637914 TRIM26Q12899 539 aaPredicted RBP19.02■□□□□ 0.64
AMT-253ENST00000637914 RSF1Q96T23 1441 aaPredicted RBP18.96■□□□□ 0.63
AMT-253ENST00000637914 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
AMT-253ENST00000637914 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
AMT-253ENST00000637914 ZEB1P37275 1124 aaPredicted RBP18.7■□□□□ 0.58
AMT-253ENST00000637914 TRIM41Q8WV44 630 aa18.62■□□□□ 0.57
AMT-253ENST00000637914 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
AMT-253ENST00000637914 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
AMT-253ENST00000637914 CECR2Q9BXF3 1484 aa18.55■□□□□ 0.56
AMT-253ENST00000637914 WIZO95785 1651 aa18.51■□□□□ 0.55
AMT-253ENST00000637914 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
AMT-253ENST00000637914 NACADO15069 1562 aa18.47■□□□□ 0.55
AMT-253ENST00000637914 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
AMT-253ENST00000637914 FAM9AQ8IZU1 332 aaPredicted RBP18.43■□□□□ 0.54
AMT-253ENST00000637914 PELP1Q8IZL8 1130 aaKnown RBP18.39■□□□□ 0.53
AMT-253ENST00000637914 WRNQ14191 1432 aaPredicted RBP eCLIP18.26■□□□□ 0.51
AMT-253ENST00000637914 EHMT2Q96KQ7 1210 aa18.2■□□□□ 0.5
AMT-253ENST00000637914 TOP2AP11388 1531 aaKnown RBP18.2■□□□□ 0.5
AMT-253ENST00000637914 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
AMT-253ENST00000637914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
AMT-253ENST00000637914 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
AMT-253ENST00000637914 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.5
AMT-253ENST00000637914 ACIN1Q9UKV3 1341 aaKnown RBP18.13■□□□□ 0.49
AMT-253ENST00000637914 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
AMT-253ENST00000637914 NEUROD1Q13562 356 aa18.1■□□□□ 0.49
AMT-253ENST00000637914 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
AMT-253ENST00000637914 UNC13AQ9UPW8 1703 aa18.07■□□□□ 0.48
AMT-253ENST00000637914 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
AMT-253ENST00000637914 TNIKQ9UKE5 1360 aa18.02■□□□□ 0.48
AMT-253ENST00000637914 SOGA1O94964 1423 aa18.01■□□□□ 0.47
AMT-253ENST00000637914 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
AMT-253ENST00000637914 RUSC2Q8N2Y8 1516 aa17.95■□□□□ 0.46
AMT-253ENST00000637914 EEA1Q15075 1411 aa17.95■□□□□ 0.46
AMT-253ENST00000637914 GTF3C3Q9Y5Q9 886 aa17.88■□□□□ 0.45
AMT-253ENST00000637914 GOLGA3Q08378 1498 aa17.85■□□□□ 0.45
AMT-253ENST00000637914 KIF21BO75037 1637 aa17.84■□□□□ 0.45
AMT-253ENST00000637914 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.44
AMT-253ENST00000637914 CENPBP07199 599 aaPredicted RBP17.8■□□□□ 0.44
AMT-253ENST00000637914 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
AMT-253ENST00000637914 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
AMT-253ENST00000637914 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
AMT-253ENST00000637914 TTBK1Q5TCY1 1321 aaPredicted RBP17.73■□□□□ 0.43
AMT-253ENST00000637914 BICRAQ9NZM4 1560 aa17.73■□□□□ 0.43
AMT-253ENST00000637914 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.42
AMT-253ENST00000637914 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
AMT-253ENST00000637914 VPS8Q8N3P4 1428 aa17.64■□□□□ 0.42
AMT-253ENST00000637914 CLIP1P30622 1438 aa17.63■□□□□ 0.41
AMT-253ENST00000637914 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
AMT-253ENST00000637914 MIER1Q8N108 512 aa17.6■□□□□ 0.41
AMT-253ENST00000637914 RAPGEF2Q9Y4G8 1499 aa17.57■□□□□ 0.4
AMT-253ENST00000637914 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
AMT-253ENST00000637914 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
AMT-253ENST00000637914 MYT1Q01538 1121 aa17.51■□□□□ 0.39
AMT-253ENST00000637914 ATAD2BQ9ULI0 1458 aa17.48■□□□□ 0.39
AMT-253ENST00000637914 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
AMT-253ENST00000637914 YTHDC1Q96MU7 727 aaKnown RBP17.46■□□□□ 0.39
AMT-253ENST00000637914 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.38
AMT-253ENST00000637914 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
AMT-253ENST00000637914 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
AMT-253ENST00000637914 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
AMT-253ENST00000637914 CLSPNQ9HAW4 1339 aa17.4■□□□□ 0.38
AMT-253ENST00000637914 CUX2O14529 1486 aa17.4■□□□□ 0.38
AMT-253ENST00000637914 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
AMT-253ENST00000637914 PABPN1Q86U42 306 aaKnown RBP eCLIP17.33■□□□□ 0.373e-6■■■■□ 23.3
AMT-253ENST00000637914 SLC24A1O60721 1099 aa17.32■□□□□ 0.36
AMT-253ENST00000637914 CUX1P39880 1505 aa17.26■□□□□ 0.35
AMT-253ENST00000637914 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
AMT-253ENST00000637914 APLP2Q06481 763 aa17.21■□□□□ 0.35
AMT-253ENST00000637914 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
AMT-253ENST00000637914 MAPKBP1O60336 1514 aa17.21■□□□□ 0.35
AMT-253ENST00000637914 ARHGAP35Q9NRY4 1499 aa17.2■□□□□ 0.34
AMT-253ENST00000637914 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
AMT-253ENST00000637914 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
AMT-253ENST00000637914 CCNB3Q8WWL7 1395 aa17.13■□□□□ 0.33
AMT-253ENST00000637914 MAP3K1Q13233 1512 aa17.12■□□□□ 0.33
AMT-253ENST00000637914 RANGAP1P46060 587 aaPredicted RBP17.11■□□□□ 0.33
AMT-253ENST00000637914 TIAM1Q13009 1591 aa17.1■□□□□ 0.33
AMT-253ENST00000637914 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
AMT-253ENST00000637914 NCAPD3P42695 1498 aa17.08■□□□□ 0.32
AMT-253ENST00000637914 CFTRP13569 1480 aa17.06■□□□□ 0.32
AMT-253ENST00000637914 CFAP43Q8NDM7 1665 aa17.05■□□□□ 0.32
AMT-253ENST00000637914 TSHZ2Q9NRE2 1034 aa17.05■□□□□ 0.32
AMT-253ENST00000637914 RAB3GAP2Q9H2M9 1393 aa17.04■□□□□ 0.32
AMT-253ENST00000637914 PRKCSHP14314 528 aaPredicted RBP17.02■□□□□ 0.32
AMT-253ENST00000637914 WDR97A6NE52 1622 aa17.02■□□□□ 0.31
AMT-253ENST00000637914 KCNH8Q96L42 1107 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms