RNA–Protein interactions for RNA: ENST00000635936.1

AMT-227, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,223 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-227ENST00000635936 NISCHQ9Y2I1 1504 aa35.07■■■■□ 3.2
AMT-227ENST00000635936 CCDC180Q9P1Z9 1646 aa30.53■■■□□ 2.48
AMT-227ENST00000635936 ABCC9O60706 1549 aa29.92■■■□□ 2.38
AMT-227ENST00000635936 ZCCHC6Q5VYS8 1495 aaKnown RBP29.56■■■□□ 2.32
AMT-227ENST00000635936 SHROOM4Q9ULL8 1493 aa29.3■■■□□ 2.28
AMT-227ENST00000635936 DCAF8L2P0C7V8 631 aa29.05■■■□□ 2.24
AMT-227ENST00000635936 DCAF1Q9Y4B6 1507 aa28.86■■■□□ 2.21
AMT-227ENST00000635936 RB1CC1Q8TDY2 1594 aa28.69■■■□□ 2.18
AMT-227ENST00000635936 NACADO15069 1562 aa28.68■■■□□ 2.18
AMT-227ENST00000635936 MYO15BQ96JP2 1530 aa28.5■■■□□ 2.15
AMT-227ENST00000635936 SUPT5HO00267 1087 aaKnown RBP28.46■■■□□ 2.15
AMT-227ENST00000635936 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
AMT-227ENST00000635936 SCRIBQ14160 1630 aa28.07■■■□□ 2.08
AMT-227ENST00000635936 PABPN1Q86U42 306 aaKnown RBP eCLIP28.06■■■□□ 2.083e-6■■■■□ 23.3
AMT-227ENST00000635936 BICRAQ9NZM4 1560 aa27.93■■■□□ 2.06
AMT-227ENST00000635936 RSF1Q96T23 1441 aaPredicted RBP27.49■■□□□ 1.99
AMT-227ENST00000635936 CHIC1Q5VXU3 224 aa27.45■■□□□ 1.98
AMT-227ENST00000635936 DNAJC5BQ9UF47 199 aa27.41■■□□□ 1.98
AMT-227ENST00000635936 CECR2Q9BXF3 1484 aa27.34■■□□□ 1.97
AMT-227ENST00000635936 MROH2BQ7Z745 1585 aa27.21■■□□□ 1.95
AMT-227ENST00000635936 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.94
AMT-227ENST00000635936 HRCP23327 699 aa27.14■■□□□ 1.94
AMT-227ENST00000635936 WIZO95785 1651 aa27.04■■□□□ 1.92
AMT-227ENST00000635936 CC2D2AQ9P2K1 1620 aa27.02■■□□□ 1.92
AMT-227ENST00000635936 BAZ1AQ9NRL2 1556 aaPredicted RBP27■■□□□ 1.91
AMT-227ENST00000635936 SMARCA4P51532 1647 aa26.85■■□□□ 1.89
AMT-227ENST00000635936 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.86
AMT-227ENST00000635936 ATAD2BQ9ULI0 1458 aa26.6■■□□□ 1.85
AMT-227ENST00000635936 TRIM41Q8WV44 630 aa26.59■■□□□ 1.85
AMT-227ENST00000635936 LOC105371045A0A1W2PR82 267 aa26.55■■□□□ 1.84
AMT-227ENST00000635936 PCGF6Q9BYE7 350 aa26.53■■□□□ 1.84
AMT-227ENST00000635936 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
AMT-227ENST00000635936 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
AMT-227ENST00000635936 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
AMT-227ENST00000635936 PEG3Q9GZU2 1588 aa26.44■■□□□ 1.82
AMT-227ENST00000635936 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
AMT-227ENST00000635936 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
AMT-227ENST00000635936 PPARGC1BQ86YN6 1023 aaKnown RBP26.33■■□□□ 1.8
AMT-227ENST00000635936 FAM9AQ8IZU1 332 aaPredicted RBP26.29■■□□□ 1.8
AMT-227ENST00000635936 ABCC8Q09428 1581 aa26.19■■□□□ 1.78
AMT-227ENST00000635936 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
AMT-227ENST00000635936 NESP48681 1621 aa25.98■■□□□ 1.75
AMT-227ENST00000635936 TRIM26Q12899 539 aaPredicted RBP25.98■■□□□ 1.75
AMT-227ENST00000635936 WRNQ14191 1432 aaPredicted RBP eCLIP25.84■■□□□ 1.73
AMT-227ENST00000635936 PELP1Q8IZL8 1130 aaKnown RBP25.83■■□□□ 1.72
AMT-227ENST00000635936 SOGA1O94964 1423 aa25.8■■□□□ 1.72
AMT-227ENST00000635936 CADPSQ9ULU8 1353 aa25.77■■□□□ 1.72
AMT-227ENST00000635936 ZEB1P37275 1124 aaPredicted RBP25.76■■□□□ 1.71
AMT-227ENST00000635936 SYNJ1O43426 1573 aa25.75■■□□□ 1.71
AMT-227ENST00000635936 LAMC3Q9Y6N6 1575 aa25.75■■□□□ 1.71
AMT-227ENST00000635936 RUSC2Q8N2Y8 1516 aa25.71■■□□□ 1.71
AMT-227ENST00000635936 ERCC6Q03468 1493 aa25.7■■□□□ 1.7
AMT-227ENST00000635936 CFTRP13569 1480 aa25.65■■□□□ 1.7
AMT-227ENST00000635936 EEA1Q15075 1411 aa25.65■■□□□ 1.7
AMT-227ENST00000635936 KIF21AQ7Z4S6 1674 aa25.62■■□□□ 1.69
AMT-227ENST00000635936 CSRNP3Q8WYN3 585 aa25.61■■□□□ 1.69
AMT-227ENST00000635936 PDS5BQ9NTI5 1447 aa25.58■■□□□ 1.69
AMT-227ENST00000635936 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
AMT-227ENST00000635936 FANCD2Q9BXW9 1451 aa25.5■■□□□ 1.67
AMT-227ENST00000635936 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
AMT-227ENST00000635936 TNIKQ9UKE5 1360 aa25.45■■□□□ 1.66
AMT-227ENST00000635936 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
AMT-227ENST00000635936 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
AMT-227ENST00000635936 CEP164Q9UPV0 1460 aa25.42■■□□□ 1.66
AMT-227ENST00000635936 CEP162Q5TB80 1403 aa25.42■■□□□ 1.66
AMT-227ENST00000635936 GOLGA3Q08378 1498 aa25.42■■□□□ 1.66
AMT-227ENST00000635936 UBTFP17480 764 aaKnown RBP25.41■■□□□ 1.66
AMT-227ENST00000635936 SCAF1Q9H7N4 1312 aaKnown RBP25.39■■□□□ 1.66
AMT-227ENST00000635936 CUX1P39880 1505 aa25.38■■□□□ 1.65
AMT-227ENST00000635936 KIF21BO75037 1637 aa25.34■■□□□ 1.65
AMT-227ENST00000635936 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
AMT-227ENST00000635936 URB2Q14146 1524 aaKnown RBP25.27■■□□□ 1.64
AMT-227ENST00000635936 CUX2O14529 1486 aa25.27■■□□□ 1.64
AMT-227ENST00000635936 WDR62O43379 1518 aa25.25■■□□□ 1.63
AMT-227ENST00000635936 RAPGEF2Q9Y4G8 1499 aa25.22■■□□□ 1.63
AMT-227ENST00000635936 TOPBP1Q92547 1522 aa25.11■■□□□ 1.61
AMT-227ENST00000635936 KIF27Q86VH2 1401 aa25.1■■□□□ 1.61
AMT-227ENST00000635936 PRXQ9BXM0 1461 aa25.08■■□□□ 1.61
AMT-227ENST00000635936 CLIP1P30622 1438 aa25.08■■□□□ 1.61
AMT-227ENST00000635936 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
AMT-227ENST00000635936 ERICH3Q5RHP9 1530 aa25.04■■□□□ 1.6
AMT-227ENST00000635936 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
AMT-227ENST00000635936 FGD5Q6ZNL6 1462 aa25.01■■□□□ 1.59
AMT-227ENST00000635936 RANGAP1P46060 587 aaPredicted RBP24.99■■□□□ 1.59
AMT-227ENST00000635936 ACIN1Q9UKV3 1341 aaKnown RBP24.95■■□□□ 1.58
AMT-227ENST00000635936 POLA1P09884 1462 aaPredicted RBP24.93■■□□□ 1.58
AMT-227ENST00000635936 VPS8Q8N3P4 1428 aa24.91■■□□□ 1.58
AMT-227ENST00000635936 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.57
AMT-227ENST00000635936 IGF1RP08069 1367 aa24.87■■□□□ 1.57
AMT-227ENST00000635936 ZNF608Q9ULD9 1512 aaPredicted RBP24.87■■□□□ 1.57
AMT-227ENST00000635936 IFT140Q96RY7 1462 aa24.85■■□□□ 1.57
AMT-227ENST00000635936 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.57
AMT-227ENST00000635936 NEUROD1Q13562 356 aa24.81■■□□□ 1.56
AMT-227ENST00000635936 MYT1Q01538 1121 aa24.78■■□□□ 1.56
AMT-227ENST00000635936 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
AMT-227ENST00000635936 CARMIL1Q5VZK9 1371 aa24.75■■□□□ 1.55
AMT-227ENST00000635936 AQRO60306 1485 aaKnown RBP eCLIP24.75■■□□□ 1.558e-7■■■■□ 24.7
AMT-227ENST00000635936 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
AMT-227ENST00000635936 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
AMT-227ENST00000635936 APLP2Q06481 763 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms