RNA–Protein interactions for RNA: ENST00000636023.1

AMT-228, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 1,780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-228ENST00000636023 NISCHQ9Y2I1 1504 aa35.71■■■■□ 3.31
AMT-228ENST00000636023 ABCC9O60706 1549 aa32.14■■■□□ 2.74
AMT-228ENST00000636023 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
AMT-228ENST00000636023 RB1CC1Q8TDY2 1594 aa30.56■■■□□ 2.48
AMT-228ENST00000636023 NACADO15069 1562 aa30.35■■■□□ 2.45
AMT-228ENST00000636023 DNAJC5BQ9UF47 199 aa30.27■■■□□ 2.44
AMT-228ENST00000636023 DCAF8L2P0C7V8 631 aa30.14■■■□□ 2.42
AMT-228ENST00000636023 UNC13AQ9UPW8 1703 aa29.92■■■□□ 2.38
AMT-228ENST00000636023 PABPN1Q86U42 306 aaKnown RBP eCLIP29.92■■■□□ 2.383e-6■■■■□ 23.3
AMT-228ENST00000636023 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
AMT-228ENST00000636023 BICRAQ9NZM4 1560 aa29.71■■■□□ 2.35
AMT-228ENST00000636023 ZCCHC6Q5VYS8 1495 aaKnown RBP29.56■■■□□ 2.32
AMT-228ENST00000636023 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
AMT-228ENST00000636023 SHROOM4Q9ULL8 1493 aa29.27■■■□□ 2.28
AMT-228ENST00000636023 SCRIBQ14160 1630 aa29.19■■■□□ 2.26
AMT-228ENST00000636023 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
AMT-228ENST00000636023 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
AMT-228ENST00000636023 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
AMT-228ENST00000636023 NCAPD3P42695 1498 aa28.03■■■□□ 2.08
AMT-228ENST00000636023 ATAD2BQ9ULI0 1458 aa27.92■■■□□ 2.06
AMT-228ENST00000636023 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
AMT-228ENST00000636023 DNAJC5Q9H3Z4 198 aa27.86■■■□□ 2.05
AMT-228ENST00000636023 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
AMT-228ENST00000636023 HMGXB3Q12766 1538 aa27.79■■■□□ 2.04
AMT-228ENST00000636023 CUX2O14529 1486 aa27.74■■■□□ 2.03
AMT-228ENST00000636023 ERCC6Q03468 1493 aa27.74■■■□□ 2.03
AMT-228ENST00000636023 BAZ1AQ9NRL2 1556 aaPredicted RBP27.7■■■□□ 2.03
AMT-228ENST00000636023 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
AMT-228ENST00000636023 PEG3Q9GZU2 1588 aa27.61■■■□□ 2.01
AMT-228ENST00000636023 NESP48681 1621 aa27.59■■■□□ 2.01
AMT-228ENST00000636023 MROH2BQ7Z745 1585 aa27.51■■□□□ 1.99
AMT-228ENST00000636023 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.98
AMT-228ENST00000636023 THOC2Q8NI27 1593 aaKnown RBP27.34■■□□□ 1.97
AMT-228ENST00000636023 KIF21AQ7Z4S6 1674 aa27.26■■□□□ 1.95
AMT-228ENST00000636023 PDS5BQ9NTI5 1447 aa27.23■■□□□ 1.95
AMT-228ENST00000636023 WIZO95785 1651 aa27.18■■□□□ 1.94
AMT-228ENST00000636023 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
AMT-228ENST00000636023 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
AMT-228ENST00000636023 WDR62O43379 1518 aa26.94■■□□□ 1.9
AMT-228ENST00000636023 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
AMT-228ENST00000636023 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
AMT-228ENST00000636023 CFTRP13569 1480 aa26.84■■□□□ 1.89
AMT-228ENST00000636023 FANCD2Q9BXW9 1451 aa26.84■■□□□ 1.89
AMT-228ENST00000636023 TOP2AP11388 1531 aaKnown RBP26.81■■□□□ 1.88
AMT-228ENST00000636023 URB2Q14146 1524 aaKnown RBP26.63■■□□□ 1.85
AMT-228ENST00000636023 PRDM2Q13029 1718 aa26.58■■□□□ 1.85
AMT-228ENST00000636023 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
AMT-228ENST00000636023 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
AMT-228ENST00000636023 OSCARQ8IYS5 282 aa26.47■■□□□ 1.83
AMT-228ENST00000636023 IFT140Q96RY7 1462 aa26.35■■□□□ 1.81
AMT-228ENST00000636023 TOPBP1Q92547 1522 aa26.33■■□□□ 1.81
AMT-228ENST00000636023 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
AMT-228ENST00000636023 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
AMT-228ENST00000636023 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
AMT-228ENST00000636023 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
AMT-228ENST00000636023 RIMBP3CA6NJZ7 1639 aa26.14■■□□□ 1.78
AMT-228ENST00000636023 RIMBP3BA6NNM3 1639 aa26.14■■□□□ 1.78
AMT-228ENST00000636023 RIMBP3Q9UFD9 1639 aa26.14■■□□□ 1.78
AMT-228ENST00000636023 TARBP1Q13395 1621 aaKnown RBP26.12■■□□□ 1.77
AMT-228ENST00000636023 AQRO60306 1485 aaKnown RBP eCLIP26.07■■□□□ 1.768e-7■■■■□ 24.7
AMT-228ENST00000636023 POLA1P09884 1462 aaPredicted RBP26.05■■□□□ 1.76
AMT-228ENST00000636023 ARHGEF11O15085 1522 aa26.04■■□□□ 1.76
AMT-228ENST00000636023 CHD1O14646 1710 aa26■■□□□ 1.75
AMT-228ENST00000636023 RAD54L2Q9Y4B4 1467 aa25.96■■□□□ 1.75
AMT-228ENST00000636023 SOGA1O94964 1423 aa25.93■■□□□ 1.74
AMT-228ENST00000636023 FBLN2P98095 1184 aa25.9■■□□□ 1.74
AMT-228ENST00000636023 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
AMT-228ENST00000636023 FGD5Q6ZNL6 1462 aa25.87■■□□□ 1.73
AMT-228ENST00000636023 CYB5RLQ6IPT4 315 aa25.86■■□□□ 1.73
AMT-228ENST00000636023 CUX1P39880 1505 aa25.85■■□□□ 1.73
AMT-228ENST00000636023 WDR97A6NE52 1622 aa25.84■■□□□ 1.73
AMT-228ENST00000636023 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
AMT-228ENST00000636023 ARAP1Q96P48 1450 aa25.78■■□□□ 1.72
AMT-228ENST00000636023 MAGI1Q96QZ7 1491 aaPredicted RBP25.72■■□□□ 1.71
AMT-228ENST00000636023 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
AMT-228ENST00000636023 CHMP7Q8WUX9 453 aaPredicted RBP25.7■■□□□ 1.7
AMT-228ENST00000636023 CLASP1Q7Z460 1538 aa25.69■■□□□ 1.7
AMT-228ENST00000636023 SYNJ1O43426 1573 aa25.66■■□□□ 1.7
AMT-228ENST00000636023 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
AMT-228ENST00000636023 SUPT5HO00267 1087 aaKnown RBP25.63■■□□□ 1.69
AMT-228ENST00000636023 PBRM1Q86U86 1689 aa25.62■■□□□ 1.69
AMT-228ENST00000636023 GAPVD1Q14C86 1478 aa25.62■■□□□ 1.69
AMT-228ENST00000636023 ABCA10Q8WWZ4 1543 aa25.59■■□□□ 1.69
AMT-228ENST00000636023 TRHP20396 242 aaPredicted RBP25.57■■□□□ 1.68
AMT-228ENST00000636023 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
AMT-228ENST00000636023 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.66
AMT-228ENST00000636023 BIVM-ERCC5R4GMW8 1640 aa25.42■■□□□ 1.66
AMT-228ENST00000636023 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
AMT-228ENST00000636023 GRIN2AQ12879 1464 aa25.38■■□□□ 1.65
AMT-228ENST00000636023 ADAMTS12P58397 1594 aa25.35■■□□□ 1.65
AMT-228ENST00000636023 NUP160Q12769 1436 aa25.32■■□□□ 1.64
AMT-228ENST00000636023 CEP170Q5SW79 1584 aa25.3■■□□□ 1.64
AMT-228ENST00000636023 ERCC6L2Q5T890 1561 aa25.29■■□□□ 1.64
AMT-228ENST00000636023 FHAD1B1AJZ9 1412 aa25.28■■□□□ 1.64
AMT-228ENST00000636023 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
AMT-228ENST00000636023 SHROOM2Q13796 1616 aa25.22■■□□□ 1.63
AMT-228ENST00000636023 JPH4Q96JJ6 628 aa25.07■■□□□ 1.6
AMT-228ENST00000636023 PRG4Q92954 1404 aaPredicted RBP25.07■■□□□ 1.6
AMT-228ENST00000636023 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
AMT-228ENST00000636023 KIF13AQ9H1H9 1805 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms