RNA–Protein interactions for RNA: ENST00000636991.1

AMT-242, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,403 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-242ENST00000636991 NISCHQ9Y2I1 1504 aa27.64■■■□□ 2.02
AMT-242ENST00000636991 CCDC180Q9P1Z9 1646 aa23.82■■□□□ 1.4
AMT-242ENST00000636991 SHROOM4Q9ULL8 1493 aa23.65■■□□□ 1.38
AMT-242ENST00000636991 ZCCHC6Q5VYS8 1495 aaKnown RBP23.39■■□□□ 1.34
AMT-242ENST00000636991 ABCC9O60706 1549 aa23.38■■□□□ 1.33
AMT-242ENST00000636991 SUPT5HO00267 1087 aaKnown RBP23.19■■□□□ 1.3
AMT-242ENST00000636991 HRCP23327 699 aa23.07■■□□□ 1.28
AMT-242ENST00000636991 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
AMT-242ENST00000636991 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
AMT-242ENST00000636991 PELP1Q8IZL8 1130 aaKnown RBP22.66■■□□□ 1.22
AMT-242ENST00000636991 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
AMT-242ENST00000636991 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
AMT-242ENST00000636991 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
AMT-242ENST00000636991 NACADO15069 1562 aa22.4■■□□□ 1.18
AMT-242ENST00000636991 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
AMT-242ENST00000636991 PPARGC1BQ86YN6 1023 aaKnown RBP22.36■■□□□ 1.17
AMT-242ENST00000636991 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
AMT-242ENST00000636991 LOC105371045A0A1W2PR82 267 aa21.95■■□□□ 1.1
AMT-242ENST00000636991 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
AMT-242ENST00000636991 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.13e-6■■■■□ 23.3
AMT-242ENST00000636991 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
AMT-242ENST00000636991 MYT1Q01538 1121 aa21.9■■□□□ 1.1
AMT-242ENST00000636991 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
AMT-242ENST00000636991 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
AMT-242ENST00000636991 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
AMT-242ENST00000636991 BICRAQ9NZM4 1560 aa21.76■■□□□ 1.07
AMT-242ENST00000636991 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
AMT-242ENST00000636991 TRIM41Q8WV44 630 aa21.57■■□□□ 1.04
AMT-242ENST00000636991 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
AMT-242ENST00000636991 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
AMT-242ENST00000636991 DNAJC5BQ9UF47 199 aa21.43■■□□□ 1.02
AMT-242ENST00000636991 WIZO95785 1651 aa21.41■■□□□ 1.02
AMT-242ENST00000636991 ACIN1Q9UKV3 1341 aaKnown RBP21.33■■□□□ 1
AMT-242ENST00000636991 EHMT2Q96KQ7 1210 aa21.28■■□□□ 1
AMT-242ENST00000636991 BAZ1AQ9NRL2 1556 aaPredicted RBP21.28■■□□□ 1
AMT-242ENST00000636991 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
AMT-242ENST00000636991 NEUROD1Q13562 356 aa21.16■□□□□ 0.98
AMT-242ENST00000636991 CC2D2AQ9P2K1 1620 aa21.1■□□□□ 0.97
AMT-242ENST00000636991 CENPBP07199 599 aaPredicted RBP21.1■□□□□ 0.97
AMT-242ENST00000636991 GTF3C3Q9Y5Q9 886 aa21.08■□□□□ 0.97
AMT-242ENST00000636991 TOP2AP11388 1531 aaKnown RBP21.05■□□□□ 0.96
AMT-242ENST00000636991 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
AMT-242ENST00000636991 CCDC88BA6NC98 1476 aa20.98■□□□□ 0.95
AMT-242ENST00000636991 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
AMT-242ENST00000636991 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
AMT-242ENST00000636991 DIEXFQ68CQ4 756 aaKnown RBP20.86■□□□□ 0.93
AMT-242ENST00000636991 SOGA1O94964 1423 aa20.78■□□□□ 0.92
AMT-242ENST00000636991 CCER1Q8TC90 406 aaPredicted RBP20.74■□□□□ 0.91
AMT-242ENST00000636991 ATAD2BQ9ULI0 1458 aa20.74■□□□□ 0.91
AMT-242ENST00000636991 RUSC2Q8N2Y8 1516 aa20.7■□□□□ 0.9
AMT-242ENST00000636991 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
AMT-242ENST00000636991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
AMT-242ENST00000636991 CEP162Q5TB80 1403 aa20.68■□□□□ 0.9
AMT-242ENST00000636991 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
AMT-242ENST00000636991 EEA1Q15075 1411 aa20.67■□□□□ 0.9
AMT-242ENST00000636991 TNIKQ9UKE5 1360 aa20.63■□□□□ 0.89
AMT-242ENST00000636991 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
AMT-242ENST00000636991 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
AMT-242ENST00000636991 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
AMT-242ENST00000636991 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
AMT-242ENST00000636991 HMGXB3Q12766 1538 aa20.57■□□□□ 0.88
AMT-242ENST00000636991 UBTFP17480 764 aaKnown RBP20.54■□□□□ 0.88
AMT-242ENST00000636991 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
AMT-242ENST00000636991 SYNJ1O43426 1573 aa20.49■□□□□ 0.87
AMT-242ENST00000636991 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
AMT-242ENST00000636991 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
AMT-242ENST00000636991 KIF21BO75037 1637 aa20.4■□□□□ 0.86
AMT-242ENST00000636991 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
AMT-242ENST00000636991 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
AMT-242ENST00000636991 CLIP1P30622 1438 aa20.28■□□□□ 0.84
AMT-242ENST00000636991 MIER1Q8N108 512 aa20.25■□□□□ 0.83
AMT-242ENST00000636991 RAPGEF2Q9Y4G8 1499 aa20.25■□□□□ 0.83
AMT-242ENST00000636991 NESP48681 1621 aa20.25■□□□□ 0.83
AMT-242ENST00000636991 TOP2BQ02880 1626 aa20.22■□□□□ 0.83
AMT-242ENST00000636991 VPS8Q8N3P4 1428 aa20.21■□□□□ 0.83
AMT-242ENST00000636991 ANP32EQ9BTT0 268 aa20.19■□□□□ 0.82
AMT-242ENST00000636991 BCL11AQ9H165 835 aa20.18■□□□□ 0.82
AMT-242ENST00000636991 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
AMT-242ENST00000636991 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
AMT-242ENST00000636991 ERCC6Q03468 1493 aa20.14■□□□□ 0.81
AMT-242ENST00000636991 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
AMT-242ENST00000636991 CADPSQ9ULU8 1353 aa20.13■□□□□ 0.81
AMT-242ENST00000636991 APLP2Q06481 763 aa20.13■□□□□ 0.81
AMT-242ENST00000636991 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
AMT-242ENST00000636991 SUPT16HQ9Y5B9 1047 aaKnown RBP20.08■□□□□ 0.8
AMT-242ENST00000636991 ERICH3Q5RHP9 1530 aa20.05■□□□□ 0.8
AMT-242ENST00000636991 PRXQ9BXM0 1461 aa20.03■□□□□ 0.8
AMT-242ENST00000636991 CUX1P39880 1505 aa20.03■□□□□ 0.8
AMT-242ENST00000636991 PDS5BQ9NTI5 1447 aa20.03■□□□□ 0.8
AMT-242ENST00000636991 TSHZ2Q9NRE2 1034 aa20.02■□□□□ 0.8
AMT-242ENST00000636991 CFTRP13569 1480 aa20■□□□□ 0.79
AMT-242ENST00000636991 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
AMT-242ENST00000636991 ARAP1Q96P48 1450 aa19.96■□□□□ 0.79
AMT-242ENST00000636991 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
AMT-242ENST00000636991 FANCD2Q9BXW9 1451 aa19.9■□□□□ 0.78
AMT-242ENST00000636991 KANK4Q5T7N3 995 aaPredicted RBP19.9■□□□□ 0.78
AMT-242ENST00000636991 PRDM2Q13029 1718 aa19.85■□□□□ 0.77
AMT-242ENST00000636991 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
AMT-242ENST00000636991 CUX2O14529 1486 aa19.82■□□□□ 0.76
AMT-242ENST00000636991 MRC2Q9UBG0 1479 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms