RNA–Protein interactions for RNA: ENST00000637059.1

AMT-243, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 1,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-243ENST00000637059 NISCHQ9Y2I1 1504 aa39.37■■■■□ 3.89
AMT-243ENST00000637059 CCDC180Q9P1Z9 1646 aa35.24■■■■□ 3.23
AMT-243ENST00000637059 ABCC9O60706 1549 aa35.21■■■■□ 3.23
AMT-243ENST00000637059 RB1CC1Q8TDY2 1594 aa33.5■■■□□ 2.95
AMT-243ENST00000637059 NACADO15069 1562 aa33.3■■■□□ 2.92
AMT-243ENST00000637059 DCAF8L2P0C7V8 631 aa33.21■■■□□ 2.91
AMT-243ENST00000637059 DNAJC5BQ9UF47 199 aa32.98■■■□□ 2.87
AMT-243ENST00000637059 MYO15BQ96JP2 1530 aa32.86■■■□□ 2.85
AMT-243ENST00000637059 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.843e-6■■■■□ 23.3
AMT-243ENST00000637059 UNC13AQ9UPW8 1703 aa32.79■■■□□ 2.84
AMT-243ENST00000637059 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
AMT-243ENST00000637059 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
AMT-243ENST00000637059 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
AMT-243ENST00000637059 SCRIBQ14160 1630 aa32.17■■■□□ 2.74
AMT-243ENST00000637059 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
AMT-243ENST00000637059 CC2D2AQ9P2K1 1620 aa31.79■■■□□ 2.68
AMT-243ENST00000637059 EIF4G1Q04637 1599 aaKnown RBP31.75■■■□□ 2.67
AMT-243ENST00000637059 CECR2Q9BXF3 1484 aa31.68■■■□□ 2.66
AMT-243ENST00000637059 NCAPD3P42695 1498 aa30.76■■■□□ 2.51
AMT-243ENST00000637059 ATAD2BQ9ULI0 1458 aa30.7■■■□□ 2.51
AMT-243ENST00000637059 SMARCA4P51532 1647 aa30.68■■■□□ 2.5
AMT-243ENST00000637059 SMARCA2P51531 1590 aa30.58■■■□□ 2.49
AMT-243ENST00000637059 BAZ1AQ9NRL2 1556 aaPredicted RBP30.53■■■□□ 2.48
AMT-243ENST00000637059 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
AMT-243ENST00000637059 BAZ1BQ9UIG0 1483 aaKnown RBP30.39■■■□□ 2.46
AMT-243ENST00000637059 PEG3Q9GZU2 1588 aa30.37■■■□□ 2.45
AMT-243ENST00000637059 MROH2BQ7Z745 1585 aa30.36■■■□□ 2.45
AMT-243ENST00000637059 ERCC6Q03468 1493 aa30.35■■■□□ 2.45
AMT-243ENST00000637059 NESP48681 1621 aa30.29■■■□□ 2.44
AMT-243ENST00000637059 CUX2O14529 1486 aa30.25■■■□□ 2.43
AMT-243ENST00000637059 DNAJC5Q9H3Z4 198 aa30.15■■■□□ 2.42
AMT-243ENST00000637059 LAMC3Q9Y6N6 1575 aa30.04■■■□□ 2.4
AMT-243ENST00000637059 WIZO95785 1651 aa30■■■□□ 2.39
AMT-243ENST00000637059 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
AMT-243ENST00000637059 KIF21AQ7Z4S6 1674 aa29.88■■■□□ 2.37
AMT-243ENST00000637059 PDS5BQ9NTI5 1447 aa29.86■■■□□ 2.37
AMT-243ENST00000637059 CADPSQ9ULU8 1353 aa29.84■■■□□ 2.37
AMT-243ENST00000637059 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.36
AMT-243ENST00000637059 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
AMT-243ENST00000637059 TOP2AP11388 1531 aaKnown RBP29.6■■■□□ 2.33
AMT-243ENST00000637059 WDR62O43379 1518 aa29.54■■■□□ 2.32
AMT-243ENST00000637059 CFTRP13569 1480 aa29.52■■■□□ 2.32
AMT-243ENST00000637059 CEP164Q9UPV0 1460 aa29.5■■■□□ 2.31
AMT-243ENST00000637059 FANCD2Q9BXW9 1451 aa29.5■■■□□ 2.31
AMT-243ENST00000637059 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
AMT-243ENST00000637059 URB2Q14146 1524 aaKnown RBP29.27■■■□□ 2.28
AMT-243ENST00000637059 PRDM2Q13029 1718 aa29.2■■■□□ 2.27
AMT-243ENST00000637059 TOPBP1Q92547 1522 aa28.96■■■□□ 2.23
AMT-243ENST00000637059 IFT140Q96RY7 1462 aa28.92■■■□□ 2.22
AMT-243ENST00000637059 ZNF608Q9ULD9 1512 aaPredicted RBP28.91■■■□□ 2.22
AMT-243ENST00000637059 OSCARQ8IYS5 282 aa28.9■■■□□ 2.22
AMT-243ENST00000637059 TRIM41Q8WV44 630 aa28.89■■■□□ 2.21
AMT-243ENST00000637059 ABCC8Q09428 1581 aa28.86■■■□□ 2.21
AMT-243ENST00000637059 DNMBPQ6XZF7 1577 aa28.85■■■□□ 2.21
AMT-243ENST00000637059 EIF4G3O43432 1585 aaKnown RBP28.72■■■□□ 2.19
AMT-243ENST00000637059 TARBP1Q13395 1621 aaKnown RBP28.7■■■□□ 2.18
AMT-243ENST00000637059 POLA1P09884 1462 aaPredicted RBP28.67■■■□□ 2.18
AMT-243ENST00000637059 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.188e-7■■■■□ 24.7
AMT-243ENST00000637059 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
AMT-243ENST00000637059 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
AMT-243ENST00000637059 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
AMT-243ENST00000637059 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
AMT-243ENST00000637059 SOGA1O94964 1423 aa28.53■■■□□ 2.16
AMT-243ENST00000637059 SUPT5HO00267 1087 aaKnown RBP28.53■■■□□ 2.16
AMT-243ENST00000637059 CUX1P39880 1505 aa28.51■■■□□ 2.15
AMT-243ENST00000637059 FGD5Q6ZNL6 1462 aa28.51■■■□□ 2.15
AMT-243ENST00000637059 CHD1O14646 1710 aa28.49■■■□□ 2.15
AMT-243ENST00000637059 TDRD9Q8NDG6 1382 aaKnown RBP28.49■■■□□ 2.15
AMT-243ENST00000637059 ARHGEF11O15085 1522 aa28.45■■■□□ 2.14
AMT-243ENST00000637059 FBLN2P98095 1184 aa28.43■■■□□ 2.14
AMT-243ENST00000637059 WDR97A6NE52 1622 aa28.36■■■□□ 2.13
AMT-243ENST00000637059 SNAPC4Q5SXM2 1469 aa28.35■■■□□ 2.13
AMT-243ENST00000637059 GRIN2BQ13224 1484 aa28.26■■■□□ 2.12
AMT-243ENST00000637059 CYB5RLQ6IPT4 315 aa28.25■■■□□ 2.11
AMT-243ENST00000637059 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
AMT-243ENST00000637059 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
AMT-243ENST00000637059 GAPVD1Q14C86 1478 aa28.19■■■□□ 2.1
AMT-243ENST00000637059 ARAP1Q96P48 1450 aa28.19■■■□□ 2.1
AMT-243ENST00000637059 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
AMT-243ENST00000637059 PBRM1Q86U86 1689 aa28.17■■■□□ 2.1
AMT-243ENST00000637059 CLASP1Q7Z460 1538 aa28.17■■■□□ 2.1
AMT-243ENST00000637059 SYNJ2O15056 1496 aa28.16■■■□□ 2.1
AMT-243ENST00000637059 SYNJ1O43426 1573 aa28.14■■■□□ 2.09
AMT-243ENST00000637059 ABCA5Q8WWZ7 1642 aa28.13■■■□□ 2.09
AMT-243ENST00000637059 WRNQ14191 1432 aaPredicted RBP eCLIP28.08■■■□□ 2.09
AMT-243ENST00000637059 TOP2BQ02880 1626 aa28.06■■■□□ 2.08
AMT-243ENST00000637059 BIVM-ERCC5R4GMW8 1640 aa28.06■■■□□ 2.08
AMT-243ENST00000637059 ADAMTS12P58397 1594 aa27.92■■■□□ 2.06
AMT-243ENST00000637059 GRIN2AQ12879 1464 aa27.91■■■□□ 2.06
AMT-243ENST00000637059 TRHP20396 242 aaPredicted RBP27.89■■■□□ 2.05
AMT-243ENST00000637059 FHAD1B1AJZ9 1412 aa27.83■■■□□ 2.05
AMT-243ENST00000637059 CEP170Q5SW79 1584 aa27.83■■■□□ 2.04
AMT-243ENST00000637059 NUP160Q12769 1436 aa27.82■■■□□ 2.04
AMT-243ENST00000637059 ERICH3Q5RHP9 1530 aa27.81■■■□□ 2.04
AMT-243ENST00000637059 ERCC6L2Q5T890 1561 aa27.78■■■□□ 2.04
AMT-243ENST00000637059 SHROOM2Q13796 1616 aa27.68■■■□□ 2.02
AMT-243ENST00000637059 PRG4Q92954 1404 aaPredicted RBP27.54■■■□□ 2
AMT-243ENST00000637059 JPH4Q96JJ6 628 aa27.54■■■□□ 2
AMT-243ENST00000637059 IGF1RP08069 1367 aa27.52■■■□□ 2
AMT-243ENST00000637059 RUSC2Q8N2Y8 1516 aa27.51■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms