RNA–Protein interactions for RNA: ENST00000427987.6

AMT-204, Transcript of aminomethyltransferase, humanhuman

TSL 5 BASIC

Gene AMT, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-204ENST00000427987 NISCHQ9Y2I1 1504 aa35.21■■■■□ 3.23
AMT-204ENST00000427987 CCDC180Q9P1Z9 1646 aa31.24■■■□□ 2.59
AMT-204ENST00000427987 ABCC9O60706 1549 aa30.72■■■□□ 2.51
AMT-204ENST00000427987 DCAF8L2P0C7V8 631 aa29.59■■■□□ 2.33
AMT-204ENST00000427987 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
AMT-204ENST00000427987 NACADO15069 1562 aa29.36■■■□□ 2.29
AMT-204ENST00000427987 ZCCHC6Q5VYS8 1495 aaKnown RBP29.33■■■□□ 2.29
AMT-204ENST00000427987 MYO15BQ96JP2 1530 aa29.11■■■□□ 2.25
AMT-204ENST00000427987 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
AMT-204ENST00000427987 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
AMT-204ENST00000427987 PABPN1Q86U42 306 aaKnown RBP eCLIP28.75■■■□□ 2.193e-6■■■■□ 23.3
AMT-204ENST00000427987 DNAJC5BQ9UF47 199 aa28.69■■■□□ 2.18
AMT-204ENST00000427987 SCRIBQ14160 1630 aa28.66■■■□□ 2.18
AMT-204ENST00000427987 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
AMT-204ENST00000427987 SHROOM4Q9ULL8 1493 aa28.12■■■□□ 2.09
AMT-204ENST00000427987 EIF4G1Q04637 1599 aaKnown RBP27.82■■■□□ 2.04
AMT-204ENST00000427987 CC2D2AQ9P2K1 1620 aa27.73■■■□□ 2.03
AMT-204ENST00000427987 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
AMT-204ENST00000427987 SMARCA4P51532 1647 aa27.34■■□□□ 1.97
AMT-204ENST00000427987 BAZ1AQ9NRL2 1556 aaPredicted RBP27.27■■□□□ 1.96
AMT-204ENST00000427987 MROH2BQ7Z745 1585 aa27.2■■□□□ 1.94
AMT-204ENST00000427987 ATAD2BQ9ULI0 1458 aa27.18■■□□□ 1.94
AMT-204ENST00000427987 NCAPD3P42695 1498 aa27.11■■□□□ 1.93
AMT-204ENST00000427987 SMARCA2P51531 1590 aa27.1■■□□□ 1.93
AMT-204ENST00000427987 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
AMT-204ENST00000427987 HMGXB3Q12766 1538 aa26.97■■□□□ 1.91
AMT-204ENST00000427987 BAZ1BQ9UIG0 1483 aaKnown RBP26.97■■□□□ 1.91
AMT-204ENST00000427987 WIZO95785 1651 aa26.93■■□□□ 1.9
AMT-204ENST00000427987 RSF1Q96T23 1441 aaPredicted RBP26.87■■□□□ 1.89
AMT-204ENST00000427987 NESP48681 1621 aa26.59■■□□□ 1.85
AMT-204ENST00000427987 TOP2AP11388 1531 aaKnown RBP26.57■■□□□ 1.84
AMT-204ENST00000427987 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
AMT-204ENST00000427987 CUX2O14529 1486 aa26.48■■□□□ 1.83
AMT-204ENST00000427987 ERCC6Q03468 1493 aa26.48■■□□□ 1.83
AMT-204ENST00000427987 LAMC3Q9Y6N6 1575 aa26.4■■□□□ 1.82
AMT-204ENST00000427987 CADPSQ9ULU8 1353 aa26.35■■□□□ 1.81
AMT-204ENST00000427987 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
AMT-204ENST00000427987 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
AMT-204ENST00000427987 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
AMT-204ENST00000427987 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
AMT-204ENST00000427987 CFTRP13569 1480 aa26.19■■□□□ 1.78
AMT-204ENST00000427987 THOC2Q8NI27 1593 aaKnown RBP26.11■■□□□ 1.77
AMT-204ENST00000427987 FANCD2Q9BXW9 1451 aa26.08■■□□□ 1.77
AMT-204ENST00000427987 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
AMT-204ENST00000427987 MRC2Q9UBG0 1479 aa26■■□□□ 1.75
AMT-204ENST00000427987 PRDM2Q13029 1718 aa25.99■■□□□ 1.75
AMT-204ENST00000427987 WDR62O43379 1518 aa25.89■■□□□ 1.73
AMT-204ENST00000427987 URB2Q14146 1524 aaKnown RBP25.85■■□□□ 1.73
AMT-204ENST00000427987 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
AMT-204ENST00000427987 DNMBPQ6XZF7 1577 aa25.62■■□□□ 1.69
AMT-204ENST00000427987 ABCC8Q09428 1581 aa25.57■■□□□ 1.68
AMT-204ENST00000427987 CUX1P39880 1505 aa25.51■■□□□ 1.67
AMT-204ENST00000427987 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
AMT-204ENST00000427987 POLA1P09884 1462 aaPredicted RBP25.45■■□□□ 1.67
AMT-204ENST00000427987 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
AMT-204ENST00000427987 FGD5Q6ZNL6 1462 aa25.42■■□□□ 1.66
AMT-204ENST00000427987 RAD54L2Q9Y4B4 1467 aa25.41■■□□□ 1.66
AMT-204ENST00000427987 TARBP1Q13395 1621 aaKnown RBP25.38■■□□□ 1.65
AMT-204ENST00000427987 SOGA1O94964 1423 aa25.36■■□□□ 1.65
AMT-204ENST00000427987 WRNQ14191 1432 aaPredicted RBP eCLIP25.32■■□□□ 1.64
AMT-204ENST00000427987 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
AMT-204ENST00000427987 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
AMT-204ENST00000427987 EIF4G3O43432 1585 aaKnown RBP25.31■■□□□ 1.64
AMT-204ENST00000427987 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.648e-7■■■■□ 24.7
AMT-204ENST00000427987 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
AMT-204ENST00000427987 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
AMT-204ENST00000427987 TOP2BQ02880 1626 aa25.25■■□□□ 1.63
AMT-204ENST00000427987 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
AMT-204ENST00000427987 OSCARQ8IYS5 282 aa25.23■■□□□ 1.63
AMT-204ENST00000427987 WDR97A6NE52 1622 aa25.17■■□□□ 1.62
AMT-204ENST00000427987 ABCA10Q8WWZ4 1543 aa25.11■■□□□ 1.61
AMT-204ENST00000427987 GAPVD1Q14C86 1478 aa25.05■■□□□ 1.6
AMT-204ENST00000427987 SNAPC4Q5SXM2 1469 aa25.05■■□□□ 1.6
AMT-204ENST00000427987 FBLN2P98095 1184 aa25.04■■□□□ 1.6
AMT-204ENST00000427987 ABCA5Q8WWZ7 1642 aa25.03■■□□□ 1.6
AMT-204ENST00000427987 GRIN2BQ13224 1484 aa25.03■■□□□ 1.6
AMT-204ENST00000427987 PBRM1Q86U86 1689 aa25.02■■□□□ 1.6
AMT-204ENST00000427987 CHD1O14646 1710 aa25.01■■□□□ 1.59
AMT-204ENST00000427987 MAGI1Q96QZ7 1491 aaPredicted RBP24.93■■□□□ 1.58
AMT-204ENST00000427987 CHMP7Q8WUX9 453 aaPredicted RBP24.9■■□□□ 1.58
AMT-204ENST00000427987 RIMBP3CA6NJZ7 1639 aa24.86■■□□□ 1.57
AMT-204ENST00000427987 RIMBP3BA6NNM3 1639 aa24.86■■□□□ 1.57
AMT-204ENST00000427987 RIMBP3Q9UFD9 1639 aa24.86■■□□□ 1.57
AMT-204ENST00000427987 SYNJ2O15056 1496 aa24.86■■□□□ 1.57
AMT-204ENST00000427987 ADAMTS12P58397 1594 aa24.81■■□□□ 1.56
AMT-204ENST00000427987 ARHGEF11O15085 1522 aa24.8■■□□□ 1.56
AMT-204ENST00000427987 ERICH3Q5RHP9 1530 aa24.8■■□□□ 1.56
AMT-204ENST00000427987 KIF27Q86VH2 1401 aa24.77■■□□□ 1.56
AMT-204ENST00000427987 FHAD1B1AJZ9 1412 aa24.74■■□□□ 1.55
AMT-204ENST00000427987 GRIN2AQ12879 1464 aa24.72■■□□□ 1.55
AMT-204ENST00000427987 IGF1RP08069 1367 aa24.69■■□□□ 1.54
AMT-204ENST00000427987 CLASP1Q7Z460 1538 aa24.68■■□□□ 1.54
AMT-204ENST00000427987 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
AMT-204ENST00000427987 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
AMT-204ENST00000427987 CYB5RLQ6IPT4 315 aa24.61■■□□□ 1.53
AMT-204ENST00000427987 CUL7Q14999 1698 aa24.59■■□□□ 1.53
AMT-204ENST00000427987 NUP160Q12769 1436 aa24.58■■□□□ 1.53
AMT-204ENST00000427987 CARMIL1Q5VZK9 1371 aa24.55■■□□□ 1.52
AMT-204ENST00000427987 ARAP1Q96P48 1450 aa24.52■■□□□ 1.52
AMT-204ENST00000427987 HRCP23327 699 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms