RNA–Protein interactions for RNA: ENST00000637994.1

AMT-255, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,468 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-255ENST00000637994 NISCHQ9Y2I1 1504 aa32.19■■■□□ 2.74
AMT-255ENST00000637994 CCDC180Q9P1Z9 1646 aa28.05■■■□□ 2.08
AMT-255ENST00000637994 PELP1Q8IZL8 1130 aaKnown RBP27.8■■■□□ 2.04
AMT-255ENST00000637994 HRCP23327 699 aa27.21■■□□□ 1.95
AMT-255ENST00000637994 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
AMT-255ENST00000637994 MYT1Q01538 1121 aa27.06■■□□□ 1.92
AMT-255ENST00000637994 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
AMT-255ENST00000637994 DCAF1Q9Y4B6 1507 aa26.58■■□□□ 1.85
AMT-255ENST00000637994 ABCC9O60706 1549 aa26.48■■□□□ 1.83
AMT-255ENST00000637994 PPARGC1BQ86YN6 1023 aaKnown RBP26.44■■□□□ 1.82
AMT-255ENST00000637994 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
AMT-255ENST00000637994 SCAF1Q9H7N4 1312 aaKnown RBP26.24■■□□□ 1.79
AMT-255ENST00000637994 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
AMT-255ENST00000637994 NACADO15069 1562 aa26.09■■□□□ 1.77
AMT-255ENST00000637994 PCGF6Q9BYE7 350 aa26.01■■□□□ 1.75
AMT-255ENST00000637994 RB1CC1Q8TDY2 1594 aa25.87■■□□□ 1.73
AMT-255ENST00000637994 SCRIBQ14160 1630 aa25.86■■□□□ 1.73
AMT-255ENST00000637994 TTBK1Q5TCY1 1321 aaPredicted RBP25.75■■□□□ 1.71
AMT-255ENST00000637994 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
AMT-255ENST00000637994 UNC13AQ9UPW8 1703 aa25.38■■□□□ 1.65
AMT-255ENST00000637994 ACIN1Q9UKV3 1341 aaKnown RBP25.32■■□□□ 1.64
AMT-255ENST00000637994 ZEB1P37275 1124 aaPredicted RBP25.23■■□□□ 1.63
AMT-255ENST00000637994 NEUROD1Q13562 356 aa25.15■■□□□ 1.62
AMT-255ENST00000637994 GTF3C3Q9Y5Q9 886 aa25.09■■□□□ 1.61
AMT-255ENST00000637994 BICRAQ9NZM4 1560 aa25.07■■□□□ 1.6
AMT-255ENST00000637994 BCL11AQ9H165 835 aa25.04■■□□□ 1.6
AMT-255ENST00000637994 TRIM26Q12899 539 aaPredicted RBP25.04■■□□□ 1.6
AMT-255ENST00000637994 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
AMT-255ENST00000637994 RSF1Q96T23 1441 aaPredicted RBP25.01■■□□□ 1.59
AMT-255ENST00000637994 CHIC1Q5VXU3 224 aa24.98■■□□□ 1.59
AMT-255ENST00000637994 PABPN1Q86U42 306 aaKnown RBP eCLIP24.98■■□□□ 1.593e-6■■■■□ 23.3
AMT-255ENST00000637994 CENPBP07199 599 aaPredicted RBP24.91■■□□□ 1.58
AMT-255ENST00000637994 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.58
AMT-255ENST00000637994 BAZ1AQ9NRL2 1556 aaPredicted RBP24.87■■□□□ 1.57
AMT-255ENST00000637994 PRKCSHP14314 528 aaPredicted RBP24.83■■□□□ 1.56
AMT-255ENST00000637994 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
AMT-255ENST00000637994 SMARCA4P51532 1647 aa24.76■■□□□ 1.55
AMT-255ENST00000637994 WIZO95785 1651 aa24.72■■□□□ 1.55
AMT-255ENST00000637994 TOP2AP11388 1531 aaKnown RBP24.45■■□□□ 1.5
AMT-255ENST00000637994 ANP32EQ9BTT0 268 aa24.43■■□□□ 1.5
AMT-255ENST00000637994 PEG3Q9GZU2 1588 aa24.41■■□□□ 1.5
AMT-255ENST00000637994 LOC105371045A0A1W2PR82 267 aa24.4■■□□□ 1.5
AMT-255ENST00000637994 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.48
AMT-255ENST00000637994 ERICH6Q7L0X2 663 aa24.31■■□□□ 1.48
AMT-255ENST00000637994 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
AMT-255ENST00000637994 ATAD2BQ9ULI0 1458 aa24.3■■□□□ 1.48
AMT-255ENST00000637994 DIEXFQ68CQ4 756 aaKnown RBP24.29■■□□□ 1.48
AMT-255ENST00000637994 BAZ1BQ9UIG0 1483 aaKnown RBP24.2■■□□□ 1.46
AMT-255ENST00000637994 CCDC88BA6NC98 1476 aa24.18■■□□□ 1.46
AMT-255ENST00000637994 APLP2Q06481 763 aa24.15■■□□□ 1.46
AMT-255ENST00000637994 CSRNP3Q8WYN3 585 aa24.15■■□□□ 1.46
AMT-255ENST00000637994 HMGXB3Q12766 1538 aa24.06■■□□□ 1.44
AMT-255ENST00000637994 NCAPD3P42695 1498 aa24.05■■□□□ 1.44
AMT-255ENST00000637994 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.42
AMT-255ENST00000637994 TRIM41Q8WV44 630 aa23.91■■□□□ 1.42
AMT-255ENST00000637994 TSHZ2Q9NRE2 1034 aa23.88■■□□□ 1.41
AMT-255ENST00000637994 YTHDC1Q96MU7 727 aaKnown RBP23.87■■□□□ 1.41
AMT-255ENST00000637994 CLSPNQ9HAW4 1339 aa23.75■■□□□ 1.39
AMT-255ENST00000637994 ABCC8Q09428 1581 aa23.75■■□□□ 1.39
AMT-255ENST00000637994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.75■■□□□ 1.39
AMT-255ENST00000637994 CCER1Q8TC90 406 aaPredicted RBP23.75■■□□□ 1.39
AMT-255ENST00000637994 SUPT16HQ9Y5B9 1047 aaKnown RBP23.7■■□□□ 1.38
AMT-255ENST00000637994 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
AMT-255ENST00000637994 MIER1Q8N108 512 aa23.57■■□□□ 1.36
AMT-255ENST00000637994 CFTRP13569 1480 aa23.56■■□□□ 1.36
AMT-255ENST00000637994 WRNQ14191 1432 aaPredicted RBP eCLIP23.55■■□□□ 1.36
AMT-255ENST00000637994 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
AMT-255ENST00000637994 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
AMT-255ENST00000637994 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
AMT-255ENST00000637994 TOP2BQ02880 1626 aa23.35■■□□□ 1.33
AMT-255ENST00000637994 ANO8Q9HCE9 1232 aaPredicted RBP23.34■■□□□ 1.33
AMT-255ENST00000637994 BIVM-ERCC5R4GMW8 1640 aa23.33■■□□□ 1.33
AMT-255ENST00000637994 SOGA1O94964 1423 aa23.29■■□□□ 1.32
AMT-255ENST00000637994 DNAJC5BQ9UF47 199 aa23.29■■□□□ 1.32
AMT-255ENST00000637994 CUX1P39880 1505 aa23.28■■□□□ 1.32
AMT-255ENST00000637994 NESP48681 1621 aa23.27■■□□□ 1.32
AMT-255ENST00000637994 LAMC3Q9Y6N6 1575 aa23.26■■□□□ 1.31
AMT-255ENST00000637994 EEA1Q15075 1411 aa23.24■■□□□ 1.31
AMT-255ENST00000637994 FANCD2Q9BXW9 1451 aa23.23■■□□□ 1.31
AMT-255ENST00000637994 RBM19Q9Y4C8 960 aaKnown RBP23.2■■□□□ 1.3
AMT-255ENST00000637994 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
AMT-255ENST00000637994 EHMT2Q96KQ7 1210 aa23.18■■□□□ 1.3
AMT-255ENST00000637994 MSH5O43196 834 aa23.11■■□□□ 1.29
AMT-255ENST00000637994 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
AMT-255ENST00000637994 UBE2Q2Q8WVN8 375 aa23.09■■□□□ 1.29
AMT-255ENST00000637994 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
AMT-255ENST00000637994 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
AMT-255ENST00000637994 DNMBPQ6XZF7 1577 aa23.04■■□□□ 1.28
AMT-255ENST00000637994 FGD5Q6ZNL6 1462 aa23.02■■□□□ 1.28
AMT-255ENST00000637994 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
AMT-255ENST00000637994 TOPBP1Q92547 1522 aa22.99■■□□□ 1.27
AMT-255ENST00000637994 SALL2Q9Y467 1007 aaPredicted RBP22.99■■□□□ 1.27
AMT-255ENST00000637994 DEKP35659 375 aaKnown RBP22.97■■□□□ 1.27
AMT-255ENST00000637994 ERICH6BQ5W0A0 696 aa22.97■■□□□ 1.27
AMT-255ENST00000637994 KIF21BO75037 1637 aa22.96■■□□□ 1.27
AMT-255ENST00000637994 GOLGA3Q08378 1498 aa22.96■■□□□ 1.27
AMT-255ENST00000637994 KIF27Q86VH2 1401 aa22.95■■□□□ 1.26
AMT-255ENST00000637994 URB2Q14146 1524 aaKnown RBP22.93■■□□□ 1.26
AMT-255ENST00000637994 FANCIQ9NVI1 1328 aa22.89■■□□□ 1.26
AMT-255ENST00000637994 CUX2O14529 1486 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms