RNA–Protein interactions for RNA: ENST00000636594.1

AMT-235, Transcript of aminomethyltransferase, humanhuman

Gene AMT, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-235ENST00000636594 NISCHQ9Y2I1 1504 aa37.78■■■■□ 3.64
AMT-235ENST00000636594 CCDC180Q9P1Z9 1646 aa33.61■■■□□ 2.97
AMT-235ENST00000636594 ABCC9O60706 1549 aa33.14■■■□□ 2.9
AMT-235ENST00000636594 RB1CC1Q8TDY2 1594 aa31.76■■■□□ 2.68
AMT-235ENST00000636594 DCAF8L2P0C7V8 631 aa31.73■■■□□ 2.67
AMT-235ENST00000636594 NACADO15069 1562 aa31.69■■■□□ 2.66
AMT-235ENST00000636594 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
AMT-235ENST00000636594 ZCCHC6Q5VYS8 1495 aaKnown RBP31.41■■■□□ 2.62
AMT-235ENST00000636594 DCAF1Q9Y4B6 1507 aa31.24■■■□□ 2.59
AMT-235ENST00000636594 UNC13AQ9UPW8 1703 aa31.01■■■□□ 2.56
AMT-235ENST00000636594 PABPN1Q86U42 306 aaKnown RBP eCLIP30.98■■■□□ 2.55
AMT-235ENST00000636594 BICRAQ9NZM4 1560 aa30.81■■■□□ 2.52
AMT-235ENST00000636594 SCRIBQ14160 1630 aa30.68■■■□□ 2.5
AMT-235ENST00000636594 DNAJC5BQ9UF47 199 aa30.65■■■□□ 2.5
AMT-235ENST00000636594 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
AMT-235ENST00000636594 EIF4G1Q04637 1599 aaKnown RBP30.01■■■□□ 2.4
AMT-235ENST00000636594 CC2D2AQ9P2K1 1620 aa29.95■■■□□ 2.38
AMT-235ENST00000636594 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
AMT-235ENST00000636594 SMARCA4P51532 1647 aa29.33■■■□□ 2.29
AMT-235ENST00000636594 BAZ1AQ9NRL2 1556 aaPredicted RBP29.28■■■□□ 2.28
AMT-235ENST00000636594 NCAPD3P42695 1498 aa29.27■■■□□ 2.28
AMT-235ENST00000636594 ATAD2BQ9ULI0 1458 aa29.25■■■□□ 2.27
AMT-235ENST00000636594 SMARCA2P51531 1590 aa29.19■■■□□ 2.26
AMT-235ENST00000636594 MROH2BQ7Z745 1585 aa29.11■■■□□ 2.25
AMT-235ENST00000636594 HMGXB3Q12766 1538 aa29.06■■■□□ 2.24
AMT-235ENST00000636594 PEG3Q9GZU2 1588 aa29.05■■■□□ 2.24
AMT-235ENST00000636594 BAZ1BQ9UIG0 1483 aaKnown RBP28.99■■■□□ 2.23
AMT-235ENST00000636594 WIZO95785 1651 aa28.78■■■□□ 2.2
AMT-235ENST00000636594 RSF1Q96T23 1441 aaPredicted RBP28.73■■■□□ 2.19
AMT-235ENST00000636594 NESP48681 1621 aa28.62■■■□□ 2.17
AMT-235ENST00000636594 ERCC6Q03468 1493 aa28.58■■■□□ 2.17
AMT-235ENST00000636594 LAMC3Q9Y6N6 1575 aa28.5■■■□□ 2.15
AMT-235ENST00000636594 TOP2AP11388 1531 aaKnown RBP28.45■■■□□ 2.14
AMT-235ENST00000636594 CADPSQ9ULU8 1353 aa28.42■■■□□ 2.14
AMT-235ENST00000636594 PDS5BQ9NTI5 1447 aa28.36■■■□□ 2.13
AMT-235ENST00000636594 CUX2O14529 1486 aa28.33■■■□□ 2.13
AMT-235ENST00000636594 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
AMT-235ENST00000636594 CFTRP13569 1480 aa28.19■■■□□ 2.1
AMT-235ENST00000636594 THOC2Q8NI27 1593 aaKnown RBP28.18■■■□□ 2.1
AMT-235ENST00000636594 CCDC88BA6NC98 1476 aa28.16■■■□□ 2.1
AMT-235ENST00000636594 FANCD2Q9BXW9 1451 aa28.07■■■□□ 2.08
AMT-235ENST00000636594 CEP164Q9UPV0 1460 aa28.05■■■□□ 2.08
AMT-235ENST00000636594 MRC2Q9UBG0 1479 aa28.04■■■□□ 2.08
AMT-235ENST00000636594 WDR62O43379 1518 aa27.94■■■□□ 2.06
AMT-235ENST00000636594 SUPT5HO00267 1087 aaKnown RBP27.91■■■□□ 2.06
AMT-235ENST00000636594 PRDM2Q13029 1718 aa27.89■■■□□ 2.06
AMT-235ENST00000636594 URB2Q14146 1524 aaKnown RBP27.8■■■□□ 2.04
AMT-235ENST00000636594 DNAJC5Q9H3Z4 198 aa27.75■■■□□ 2.03
AMT-235ENST00000636594 ABCC8Q09428 1581 aa27.6■■■□□ 2.01
AMT-235ENST00000636594 TOPBP1Q92547 1522 aa27.59■■■□□ 2.01
AMT-235ENST00000636594 DNMBPQ6XZF7 1577 aa27.53■■■□□ 2
AMT-235ENST00000636594 IFT140Q96RY7 1462 aa27.48■■□□□ 1.99
AMT-235ENST00000636594 ZNF608Q9ULD9 1512 aaPredicted RBP27.37■■□□□ 1.97
AMT-235ENST00000636594 POLA1P09884 1462 aaPredicted RBP27.35■■□□□ 1.97
AMT-235ENST00000636594 CUX1P39880 1505 aa27.31■■□□□ 1.96
AMT-235ENST00000636594 TARBP1Q13395 1621 aaKnown RBP27.29■■□□□ 1.96
AMT-235ENST00000636594 SOGA1O94964 1423 aa27.27■■□□□ 1.96
AMT-235ENST00000636594 FGD5Q6ZNL6 1462 aa27.26■■□□□ 1.95
AMT-235ENST00000636594 RAD54L2Q9Y4B4 1467 aa27.26■■□□□ 1.95
AMT-235ENST00000636594 AQRO60306 1485 aaKnown RBP eCLIP27.21■■□□□ 1.95
AMT-235ENST00000636594 EIF4G3O43432 1585 aaKnown RBP27.21■■□□□ 1.95
AMT-235ENST00000636594 OSCARQ8IYS5 282 aa27.2■■□□□ 1.94
AMT-235ENST00000636594 TDRD9Q8NDG6 1382 aaKnown RBP27.14■■□□□ 1.94
AMT-235ENST00000636594 WRNQ14191 1432 aaPredicted RBP eCLIP27.08■■□□□ 1.93
AMT-235ENST00000636594 WDR97A6NE52 1622 aa27.05■■□□□ 1.92
AMT-235ENST00000636594 TOP2BQ02880 1626 aa27.02■■□□□ 1.92
AMT-235ENST00000636594 BIVM-ERCC5R4GMW8 1640 aa27■■□□□ 1.91
AMT-235ENST00000636594 SYNJ1O43426 1573 aa27■■□□□ 1.91
AMT-235ENST00000636594 ABCA10Q8WWZ4 1543 aa26.98■■□□□ 1.91
AMT-235ENST00000636594 FBLN2P98095 1184 aa26.97■■□□□ 1.91
AMT-235ENST00000636594 GRIN2BQ13224 1484 aa26.95■■□□□ 1.9
AMT-235ENST00000636594 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
AMT-235ENST00000636594 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
AMT-235ENST00000636594 CHD1O14646 1710 aa26.9■■□□□ 1.9
AMT-235ENST00000636594 MAGI1Q96QZ7 1491 aaPredicted RBP26.88■■□□□ 1.89
AMT-235ENST00000636594 ABCA5Q8WWZ7 1642 aa26.86■■□□□ 1.89
AMT-235ENST00000636594 CHMP7Q8WUX9 453 aaPredicted RBP26.86■■□□□ 1.89
AMT-235ENST00000636594 PBRM1Q86U86 1689 aa26.83■■□□□ 1.89
AMT-235ENST00000636594 SYNJ2O15056 1496 aa26.79■■□□□ 1.88
AMT-235ENST00000636594 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
AMT-235ENST00000636594 RIMBP3CA6NJZ7 1639 aa26.7■■□□□ 1.87
AMT-235ENST00000636594 RIMBP3BA6NNM3 1639 aa26.7■■□□□ 1.87
AMT-235ENST00000636594 RIMBP3Q9UFD9 1639 aa26.7■■□□□ 1.87
AMT-235ENST00000636594 ARHGEF11O15085 1522 aa26.68■■□□□ 1.86
AMT-235ENST00000636594 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
AMT-235ENST00000636594 CLASP1Q7Z460 1538 aa26.62■■□□□ 1.85
AMT-235ENST00000636594 FHAD1B1AJZ9 1412 aa26.62■■□□□ 1.85
AMT-235ENST00000636594 ADAMTS12P58397 1594 aa26.61■■□□□ 1.85
AMT-235ENST00000636594 GRIN2AQ12879 1464 aa26.59■■□□□ 1.85
AMT-235ENST00000636594 KIF27Q86VH2 1401 aa26.55■■□□□ 1.84
AMT-235ENST00000636594 CYB5RLQ6IPT4 315 aa26.52■■□□□ 1.84
AMT-235ENST00000636594 IGF1RP08069 1367 aa26.48■■□□□ 1.83
AMT-235ENST00000636594 NUP160Q12769 1436 aa26.48■■□□□ 1.83
AMT-235ENST00000636594 ARAP1Q96P48 1450 aa26.46■■□□□ 1.83
AMT-235ENST00000636594 CEP170Q5SW79 1584 aa26.45■■□□□ 1.82
AMT-235ENST00000636594 CUL7Q14999 1698 aa26.35■■□□□ 1.81
AMT-235ENST00000636594 CARMIL1Q5VZK9 1371 aa26.32■■□□□ 1.8
AMT-235ENST00000636594 JPH4Q96JJ6 628 aa26.28■■□□□ 1.8
AMT-235ENST00000636594 SHROOM2Q13796 1616 aa26.28■■□□□ 1.8
AMT-235ENST00000636594 ERCC6L2Q5T890 1561 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms