RNA–Protein interactions for RNA: ENST00000473163.2

AMT-210, Transcript of aminomethyltransferase, humanhuman

TSL 2

Gene AMT, Length 4,544 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-210ENST00000473163 NISCHQ9Y2I1 1504 aa22.44■■□□□ 1.18
AMT-210ENST00000473163 DCAF8L2P0C7V8 631 aa20.86■□□□□ 0.93
AMT-210ENST00000473163 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
AMT-210ENST00000473163 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
AMT-210ENST00000473163 ABCC9O60706 1549 aa19.52■□□□□ 0.71
AMT-210ENST00000473163 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
AMT-210ENST00000473163 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
AMT-210ENST00000473163 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
AMT-210ENST00000473163 FAM9AQ8IZU1 332 aaPredicted RBP19.09■□□□□ 0.65
AMT-210ENST00000473163 TRIM41Q8WV44 630 aa18.97■□□□□ 0.63
AMT-210ENST00000473163 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
AMT-210ENST00000473163 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.63e-6■■■■□ 23.3
AMT-210ENST00000473163 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
AMT-210ENST00000473163 HRCP23327 699 aa18.7■□□□□ 0.58
AMT-210ENST00000473163 LOC105371045A0A1W2PR82 267 aa18.67■□□□□ 0.58
AMT-210ENST00000473163 APLP2Q06481 763 aa18.66■□□□□ 0.58
AMT-210ENST00000473163 TTBK1Q5TCY1 1321 aaPredicted RBP18.62■□□□□ 0.57
AMT-210ENST00000473163 ZCCHC6Q5VYS8 1495 aaKnown RBP18.62■□□□□ 0.57
AMT-210ENST00000473163 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
AMT-210ENST00000473163 CCER1Q8TC90 406 aaPredicted RBP18.5■□□□□ 0.55
AMT-210ENST00000473163 UBTFP17480 764 aaKnown RBP18.44■□□□□ 0.54
AMT-210ENST00000473163 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
AMT-210ENST00000473163 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.54
AMT-210ENST00000473163 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
AMT-210ENST00000473163 RANGAP1P46060 587 aaPredicted RBP18.34■□□□□ 0.53
AMT-210ENST00000473163 NACADO15069 1562 aa18.31■□□□□ 0.52
AMT-210ENST00000473163 CENPBP07199 599 aaPredicted RBP18.26■□□□□ 0.51
AMT-210ENST00000473163 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
AMT-210ENST00000473163 DCAF1Q9Y4B6 1507 aa18.07■□□□□ 0.48
AMT-210ENST00000473163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
AMT-210ENST00000473163 ATP1B4Q9UN42 357 aaPredicted RBP17.96■□□□□ 0.47
AMT-210ENST00000473163 YTHDC1Q96MU7 727 aaKnown RBP17.91■□□□□ 0.46
AMT-210ENST00000473163 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
AMT-210ENST00000473163 MYO15BQ96JP2 1530 aa17.89■□□□□ 0.45
AMT-210ENST00000473163 MYT1Q01538 1121 aa17.77■□□□□ 0.43
AMT-210ENST00000473163 DIEXFQ68CQ4 756 aaKnown RBP17.76■□□□□ 0.43
AMT-210ENST00000473163 ITGAEP38570 1179 aa17.72■□□□□ 0.43
AMT-210ENST00000473163 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
AMT-210ENST00000473163 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
AMT-210ENST00000473163 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
AMT-210ENST00000473163 NEFLP07196 543 aa17.53■□□□□ 0.4
AMT-210ENST00000473163 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
AMT-210ENST00000473163 ZNF316A6NFI3 1004 aaPredicted RBP17.47■□□□□ 0.39
AMT-210ENST00000473163 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
AMT-210ENST00000473163 GTF3C3Q9Y5Q9 886 aa17.4■□□□□ 0.38
AMT-210ENST00000473163 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
AMT-210ENST00000473163 FAM50AQ14320 339 aaKnown RBP17.37■□□□□ 0.37
AMT-210ENST00000473163 ACIN1Q9UKV3 1341 aaKnown RBP17.36■□□□□ 0.37
AMT-210ENST00000473163 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
AMT-210ENST00000473163 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
AMT-210ENST00000473163 FBLN2P98095 1184 aa17.24■□□□□ 0.35
AMT-210ENST00000473163 EEA1Q15075 1411 aa17.24■□□□□ 0.35
AMT-210ENST00000473163 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
AMT-210ENST00000473163 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
AMT-210ENST00000473163 ATAD2BQ9ULI0 1458 aa17.19■□□□□ 0.34
AMT-210ENST00000473163 BICRAQ9NZM4 1560 aa17.17■□□□□ 0.34
AMT-210ENST00000473163 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
AMT-210ENST00000473163 P3H3Q8IVL6 736 aa17.17■□□□□ 0.34
AMT-210ENST00000473163 CLIP1P30622 1438 aa17.16■□□□□ 0.34
AMT-210ENST00000473163 EIF4G1Q04637 1599 aaKnown RBP17.16■□□□□ 0.34
AMT-210ENST00000473163 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
AMT-210ENST00000473163 WIZO95785 1651 aa17.15■□□□□ 0.34
AMT-210ENST00000473163 GOLGA3Q08378 1498 aa17.14■□□□□ 0.33
AMT-210ENST00000473163 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
AMT-210ENST00000473163 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
AMT-210ENST00000473163 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
AMT-210ENST00000473163 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
AMT-210ENST00000473163 TRIM52Q96A61 297 aa17.1■□□□□ 0.33
AMT-210ENST00000473163 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.33
AMT-210ENST00000473163 ANP32CO43423 234 aa17.05■□□□□ 0.32
AMT-210ENST00000473163 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
AMT-210ENST00000473163 CNGB1Q14028 1251 aaPredicted RBP17.03■□□□□ 0.32
AMT-210ENST00000473163 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
AMT-210ENST00000473163 SOGA1O94964 1423 aa17.01■□□□□ 0.31
AMT-210ENST00000473163 CEP164Q9UPV0 1460 aa17■□□□□ 0.31
AMT-210ENST00000473163 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
AMT-210ENST00000473163 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
AMT-210ENST00000473163 MIER1Q8N108 512 aa16.97■□□□□ 0.31
AMT-210ENST00000473163 BCANQ96GW7 911 aa16.96■□□□□ 0.31
AMT-210ENST00000473163 NCAPD3P42695 1498 aa16.96■□□□□ 0.31
AMT-210ENST00000473163 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
AMT-210ENST00000473163 PDS5BQ9NTI5 1447 aa16.93■□□□□ 0.3
AMT-210ENST00000473163 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
AMT-210ENST00000473163 CLSPNQ9HAW4 1339 aa16.87■□□□□ 0.29
AMT-210ENST00000473163 DDX10Q13206 875 aaKnown RBP16.86■□□□□ 0.29
AMT-210ENST00000473163 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
AMT-210ENST00000473163 KIF27Q86VH2 1401 aa16.85■□□□□ 0.29
AMT-210ENST00000473163 TONSLQ96HA7 1378 aa16.84■□□□□ 0.29
AMT-210ENST00000473163 CHMP7Q8WUX9 453 aaPredicted RBP16.84■□□□□ 0.29
AMT-210ENST00000473163 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
AMT-210ENST00000473163 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
AMT-210ENST00000473163 VPS8Q8N3P4 1428 aa16.76■□□□□ 0.27
AMT-210ENST00000473163 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
AMT-210ENST00000473163 MTUS2Q5JR59 1369 aa16.75■□□□□ 0.27
AMT-210ENST00000473163 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
AMT-210ENST00000473163 FKBP8Q14318 412 aa16.72■□□□□ 0.27
AMT-210ENST00000473163 NESP48681 1621 aa16.7■□□□□ 0.26
AMT-210ENST00000473163 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
AMT-210ENST00000473163 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
AMT-210ENST00000473163 ZNF777Q9ULD5 760 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms