RNA–Protein interactions for RNA: ENST00000637457.1

AMT-248, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,815 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-248ENST00000637457 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
AMT-248ENST00000637457 CCDC180Q9P1Z9 1646 aa26.75■■□□□ 1.87
AMT-248ENST00000637457 ABCC9O60706 1549 aa25.91■■□□□ 1.74
AMT-248ENST00000637457 ZCCHC6Q5VYS8 1495 aaKnown RBP25.42■■□□□ 1.66
AMT-248ENST00000637457 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.66
AMT-248ENST00000637457 DCAF1Q9Y4B6 1507 aa25.1■■□□□ 1.61
AMT-248ENST00000637457 NACADO15069 1562 aa25.06■■□□□ 1.6
AMT-248ENST00000637457 HRCP23327 699 aa25.06■■□□□ 1.6
AMT-248ENST00000637457 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
AMT-248ENST00000637457 RB1CC1Q8TDY2 1594 aa25■■□□□ 1.59
AMT-248ENST00000637457 PELP1Q8IZL8 1130 aaKnown RBP24.95■■□□□ 1.59
AMT-248ENST00000637457 SCRIBQ14160 1630 aa24.59■■□□□ 1.53
AMT-248ENST00000637457 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
AMT-248ENST00000637457 SHROOM4Q9ULL8 1493 aa24.48■■□□□ 1.51
AMT-248ENST00000637457 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.49
AMT-248ENST00000637457 PABPN1Q86U42 306 aaKnown RBP eCLIP24.34■■□□□ 1.493e-6■■■■□ 23.3
AMT-248ENST00000637457 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
AMT-248ENST00000637457 PCGF6Q9BYE7 350 aa24.24■■□□□ 1.47
AMT-248ENST00000637457 MYT1Q01538 1121 aa24.16■■□□□ 1.46
AMT-248ENST00000637457 SCAF1Q9H7N4 1312 aaKnown RBP23.91■■□□□ 1.42
AMT-248ENST00000637457 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
AMT-248ENST00000637457 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
AMT-248ENST00000637457 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
AMT-248ENST00000637457 EIF4G1Q04637 1599 aaKnown RBP23.6■■□□□ 1.37
AMT-248ENST00000637457 BAZ1AQ9NRL2 1556 aaPredicted RBP23.51■■□□□ 1.35
AMT-248ENST00000637457 SMARCA4P51532 1647 aa23.5■■□□□ 1.35
AMT-248ENST00000637457 MROH2BQ7Z745 1585 aa23.5■■□□□ 1.35
AMT-248ENST00000637457 ZEB1P37275 1124 aaPredicted RBP23.46■■□□□ 1.35
AMT-248ENST00000637457 TRIM26Q12899 539 aaPredicted RBP23.43■■□□□ 1.34
AMT-248ENST00000637457 DNAJC5BQ9UF47 199 aa23.42■■□□□ 1.34
AMT-248ENST00000637457 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
AMT-248ENST00000637457 RSF1Q96T23 1441 aaPredicted RBP23.38■■□□□ 1.33
AMT-248ENST00000637457 WIZO95785 1651 aa23.27■■□□□ 1.32
AMT-248ENST00000637457 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
AMT-248ENST00000637457 ACIN1Q9UKV3 1341 aaKnown RBP23.23■■□□□ 1.31
AMT-248ENST00000637457 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
AMT-248ENST00000637457 PEG3Q9GZU2 1588 aa23.21■■□□□ 1.31
AMT-248ENST00000637457 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
AMT-248ENST00000637457 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
AMT-248ENST00000637457 NEUROD1Q13562 356 aa23.09■■□□□ 1.29
AMT-248ENST00000637457 LOC105371045A0A1W2PR82 267 aa23.06■■□□□ 1.28
AMT-248ENST00000637457 HMGXB3Q12766 1538 aa23.06■■□□□ 1.28
AMT-248ENST00000637457 GTF3C3Q9Y5Q9 886 aa23.01■■□□□ 1.27
AMT-248ENST00000637457 TOP2AP11388 1531 aaKnown RBP22.99■■□□□ 1.27
AMT-248ENST00000637457 CENPBP07199 599 aaPredicted RBP22.9■■□□□ 1.26
AMT-248ENST00000637457 TTBK1Q5TCY1 1321 aaPredicted RBP22.81■■□□□ 1.24
AMT-248ENST00000637457 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
AMT-248ENST00000637457 DIEXFQ68CQ4 756 aaKnown RBP22.57■■□□□ 1.2
AMT-248ENST00000637457 NESP48681 1621 aa22.57■■□□□ 1.2
AMT-248ENST00000637457 CADPSQ9ULU8 1353 aa22.54■■□□□ 1.2
AMT-248ENST00000637457 CFTRP13569 1480 aa22.48■■□□□ 1.19
AMT-248ENST00000637457 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.18
AMT-248ENST00000637457 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
AMT-248ENST00000637457 CCER1Q8TC90 406 aaPredicted RBP22.32■■□□□ 1.16
AMT-248ENST00000637457 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
AMT-248ENST00000637457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.3■■□□□ 1.16
AMT-248ENST00000637457 PRDM2Q13029 1718 aa22.29■■□□□ 1.16
AMT-248ENST00000637457 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
AMT-248ENST00000637457 KIF21AQ7Z4S6 1674 aa22.26■■□□□ 1.15
AMT-248ENST00000637457 ERCC6Q03468 1493 aa22.25■■□□□ 1.15
AMT-248ENST00000637457 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
AMT-248ENST00000637457 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
AMT-248ENST00000637457 FAM9AQ8IZU1 332 aaPredicted RBP22.2■■□□□ 1.14
AMT-248ENST00000637457 YTHDC1Q96MU7 727 aaKnown RBP22.18■■□□□ 1.14
AMT-248ENST00000637457 ANP32EQ9BTT0 268 aa22.16■■□□□ 1.14
AMT-248ENST00000637457 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
AMT-248ENST00000637457 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
AMT-248ENST00000637457 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
AMT-248ENST00000637457 ZNF316A6NFI3 1004 aaPredicted RBP22.04■■□□□ 1.12
AMT-248ENST00000637457 THOC2Q8NI27 1593 aaKnown RBP22.03■■□□□ 1.12
AMT-248ENST00000637457 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
AMT-248ENST00000637457 CUX1P39880 1505 aa22■■□□□ 1.11
AMT-248ENST00000637457 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
AMT-248ENST00000637457 SYNJ1O43426 1573 aa21.96■■□□□ 1.11
AMT-248ENST00000637457 WDR62O43379 1518 aa21.96■■□□□ 1.11
AMT-248ENST00000637457 DNMBPQ6XZF7 1577 aa21.96■■□□□ 1.11
AMT-248ENST00000637457 CLSPNQ9HAW4 1339 aa21.93■■□□□ 1.1
AMT-248ENST00000637457 MIER1Q8N108 512 aa21.91■■□□□ 1.1
AMT-248ENST00000637457 TOP2BQ02880 1626 aa21.89■■□□□ 1.1
AMT-248ENST00000637457 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
AMT-248ENST00000637457 BIVM-ERCC5R4GMW8 1640 aa21.87■■□□□ 1.09
AMT-248ENST00000637457 FGD5Q6ZNL6 1462 aa21.86■■□□□ 1.09
AMT-248ENST00000637457 TSHZ2Q9NRE2 1034 aa21.85■■□□□ 1.09
AMT-248ENST00000637457 POLA1P09884 1462 aaPredicted RBP21.84■■□□□ 1.09
AMT-248ENST00000637457 SUPT16HQ9Y5B9 1047 aaKnown RBP21.84■■□□□ 1.09
AMT-248ENST00000637457 EHMT2Q96KQ7 1210 aa21.83■■□□□ 1.09
AMT-248ENST00000637457 PRKCSHP14314 528 aaPredicted RBP21.8■■□□□ 1.08
AMT-248ENST00000637457 CUX2O14529 1486 aa21.79■■□□□ 1.08
AMT-248ENST00000637457 RAD54L2Q9Y4B4 1467 aa21.78■■□□□ 1.08
AMT-248ENST00000637457 SOGA1O94964 1423 aa21.76■■□□□ 1.07
AMT-248ENST00000637457 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
AMT-248ENST00000637457 TARBP1Q13395 1621 aaKnown RBP21.69■■□□□ 1.06
AMT-248ENST00000637457 ZNF608Q9ULD9 1512 aaPredicted RBP21.64■■□□□ 1.06
AMT-248ENST00000637457 TDRD9Q8NDG6 1382 aaKnown RBP21.63■■□□□ 1.05
AMT-248ENST00000637457 ABCA10Q8WWZ4 1543 aa21.62■■□□□ 1.05
AMT-248ENST00000637457 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
AMT-248ENST00000637457 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.058e-7■■■■□ 24.7
AMT-248ENST00000637457 RUSC2Q8N2Y8 1516 aa21.56■■□□□ 1.04
AMT-248ENST00000637457 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
AMT-248ENST00000637457 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms