RNA–Protein interactions for RNA: ENST00000636871.1

AMT-240, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,076 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-240ENST00000636871 NISCHQ9Y2I1 1504 aa40.34■■■■■ 4.05
AMT-240ENST00000636871 CCDC180Q9P1Z9 1646 aa35.13■■■■□ 3.21
AMT-240ENST00000636871 ZCCHC6Q5VYS8 1495 aaKnown RBP33.9■■■■□ 3.02
AMT-240ENST00000636871 DCAF8L2P0C7V8 631 aa33.37■■■□□ 2.93
AMT-240ENST00000636871 ABCC9O60706 1549 aa33.3■■■□□ 2.92
AMT-240ENST00000636871 DCAF1Q9Y4B6 1507 aa33.29■■■□□ 2.92
AMT-240ENST00000636871 SHROOM4Q9ULL8 1493 aa33.04■■■□□ 2.88
AMT-240ENST00000636871 MYO15BQ96JP2 1530 aa32.87■■■□□ 2.85
AMT-240ENST00000636871 NACADO15069 1562 aa32.7■■■□□ 2.83
AMT-240ENST00000636871 RB1CC1Q8TDY2 1594 aa32.43■■■□□ 2.78
AMT-240ENST00000636871 SCRIBQ14160 1630 aa32.41■■■□□ 2.78
AMT-240ENST00000636871 UNC13AQ9UPW8 1703 aa31.89■■■□□ 2.7
AMT-240ENST00000636871 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.68
AMT-240ENST00000636871 BICRAQ9NZM4 1560 aa31.54■■■□□ 2.64
AMT-240ENST00000636871 PABPN1Q86U42 306 aaKnown RBP eCLIP31.43■■■□□ 2.623e-6■■■■□ 23.3
AMT-240ENST00000636871 CECR2Q9BXF3 1484 aa31.42■■■□□ 2.62
AMT-240ENST00000636871 RSF1Q96T23 1441 aaPredicted RBP31.33■■■□□ 2.61
AMT-240ENST00000636871 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
AMT-240ENST00000636871 BAZ1AQ9NRL2 1556 aaPredicted RBP31.12■■■□□ 2.57
AMT-240ENST00000636871 SMARCA4P51532 1647 aa31.02■■■□□ 2.56
AMT-240ENST00000636871 WIZO95785 1651 aa30.98■■■□□ 2.55
AMT-240ENST00000636871 PEG3Q9GZU2 1588 aa30.61■■■□□ 2.49
AMT-240ENST00000636871 TOP2AP11388 1531 aaKnown RBP30.59■■■□□ 2.49
AMT-240ENST00000636871 EIF4G1Q04637 1599 aaKnown RBP30.56■■■□□ 2.48
AMT-240ENST00000636871 ATAD2BQ9ULI0 1458 aa30.5■■■□□ 2.47
AMT-240ENST00000636871 SMARCA2P51531 1590 aa30.44■■■□□ 2.46
AMT-240ENST00000636871 CHIC1Q5VXU3 224 aa30.38■■■□□ 2.45
AMT-240ENST00000636871 BAZ1BQ9UIG0 1483 aaKnown RBP30.32■■■□□ 2.44
AMT-240ENST00000636871 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
AMT-240ENST00000636871 NCAPD3P42695 1498 aa30.2■■■□□ 2.42
AMT-240ENST00000636871 HMGXB3Q12766 1538 aa30.16■■■□□ 2.42
AMT-240ENST00000636871 CC2D2AQ9P2K1 1620 aa30.12■■■□□ 2.41
AMT-240ENST00000636871 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
AMT-240ENST00000636871 ABCC8Q09428 1581 aa29.74■■■□□ 2.35
AMT-240ENST00000636871 CFTRP13569 1480 aa29.56■■■□□ 2.32
AMT-240ENST00000636871 DNAJC5BQ9UF47 199 aa29.47■■■□□ 2.31
AMT-240ENST00000636871 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
AMT-240ENST00000636871 CADPSQ9ULU8 1353 aa29.44■■■□□ 2.3
AMT-240ENST00000636871 PRDM2Q13029 1718 aa29.41■■■□□ 2.3
AMT-240ENST00000636871 SYNJ1O43426 1573 aa29.4■■■□□ 2.3
AMT-240ENST00000636871 FAM9AQ8IZU1 332 aaPredicted RBP29.33■■■□□ 2.29
AMT-240ENST00000636871 LOC105371045A0A1W2PR82 267 aa29.28■■■□□ 2.28
AMT-240ENST00000636871 NESP48681 1621 aa29.27■■■□□ 2.28
AMT-240ENST00000636871 TOP2BQ02880 1626 aa29.23■■■□□ 2.27
AMT-240ENST00000636871 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.26
AMT-240ENST00000636871 CUX1P39880 1505 aa29.18■■■□□ 2.26
AMT-240ENST00000636871 LAMC3Q9Y6N6 1575 aa29.17■■■□□ 2.26
AMT-240ENST00000636871 SOGA1O94964 1423 aa29.17■■■□□ 2.26
AMT-240ENST00000636871 FANCD2Q9BXW9 1451 aa29.14■■■□□ 2.26
AMT-240ENST00000636871 RUSC2Q8N2Y8 1516 aa29.08■■■□□ 2.25
AMT-240ENST00000636871 EHMT2Q96KQ7 1210 aa28.98■■■□□ 2.23
AMT-240ENST00000636871 EEA1Q15075 1411 aa28.98■■■□□ 2.23
AMT-240ENST00000636871 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
AMT-240ENST00000636871 PDS5BQ9NTI5 1447 aa28.92■■■□□ 2.22
AMT-240ENST00000636871 KIF21AQ7Z4S6 1674 aa28.9■■■□□ 2.22
AMT-240ENST00000636871 CSRNP3Q8WYN3 585 aa28.88■■■□□ 2.21
AMT-240ENST00000636871 DNMBPQ6XZF7 1577 aa28.87■■■□□ 2.21
AMT-240ENST00000636871 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
AMT-240ENST00000636871 TOPBP1Q92547 1522 aa28.84■■■□□ 2.21
AMT-240ENST00000636871 URB2Q14146 1524 aaKnown RBP28.81■■■□□ 2.2
AMT-240ENST00000636871 POLA1P09884 1462 aaPredicted RBP28.71■■■□□ 2.19
AMT-240ENST00000636871 KIF27Q86VH2 1401 aa28.69■■■□□ 2.18
AMT-240ENST00000636871 KIF21BO75037 1637 aa28.67■■■□□ 2.18
AMT-240ENST00000636871 CUX2O14529 1486 aa28.66■■■□□ 2.18
AMT-240ENST00000636871 RAD54L2Q9Y4B4 1467 aa28.65■■■□□ 2.18
AMT-240ENST00000636871 GOLGA3Q08378 1498 aa28.64■■■□□ 2.18
AMT-240ENST00000636871 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
AMT-240ENST00000636871 RAPGEF2Q9Y4G8 1499 aa28.56■■■□□ 2.16
AMT-240ENST00000636871 ABCA10Q8WWZ4 1543 aa28.56■■■□□ 2.16
AMT-240ENST00000636871 TNIKQ9UKE5 1360 aa28.55■■■□□ 2.16
AMT-240ENST00000636871 UBTFP17480 764 aaKnown RBP28.54■■■□□ 2.16
AMT-240ENST00000636871 PRXQ9BXM0 1461 aa28.53■■■□□ 2.16
AMT-240ENST00000636871 WDR97A6NE52 1622 aa28.5■■■□□ 2.15
AMT-240ENST00000636871 ERCC6Q03468 1493 aa28.5■■■□□ 2.15
AMT-240ENST00000636871 IGF1RP08069 1367 aa28.47■■■□□ 2.15
AMT-240ENST00000636871 ERICH3Q5RHP9 1530 aa28.46■■■□□ 2.15
AMT-240ENST00000636871 CEP162Q5TB80 1403 aa28.45■■■□□ 2.14
AMT-240ENST00000636871 WDR62O43379 1518 aa28.45■■■□□ 2.14
AMT-240ENST00000636871 TARBP1Q13395 1621 aaKnown RBP28.41■■■□□ 2.14
AMT-240ENST00000636871 THOC2Q8NI27 1593 aaKnown RBP28.39■■■□□ 2.14
AMT-240ENST00000636871 ABCA5Q8WWZ7 1642 aa28.35■■■□□ 2.13
AMT-240ENST00000636871 TDRD9Q8NDG6 1382 aaKnown RBP28.35■■■□□ 2.13
AMT-240ENST00000636871 CARMIL1Q5VZK9 1371 aa28.32■■■□□ 2.12
AMT-240ENST00000636871 GAPVD1Q14C86 1478 aa28.27■■■□□ 2.12
AMT-240ENST00000636871 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
AMT-240ENST00000636871 CUL7Q14999 1698 aa28.22■■■□□ 2.11
AMT-240ENST00000636871 CLIP1P30622 1438 aa28.2■■■□□ 2.11
AMT-240ENST00000636871 AQRO60306 1485 aaKnown RBP eCLIP28.18■■■□□ 2.18e-7■■■■□ 24.7
AMT-240ENST00000636871 ZNF608Q9ULD9 1512 aaPredicted RBP28.16■■■□□ 2.1
AMT-240ENST00000636871 RANGAP1P46060 587 aaPredicted RBP28.15■■■□□ 2.1
AMT-240ENST00000636871 PBRM1Q86U86 1689 aa28.14■■■□□ 2.1
AMT-240ENST00000636871 EIF4G3O43432 1585 aaKnown RBP28.04■■■□□ 2.08
AMT-240ENST00000636871 GRIN2BQ13224 1484 aa28.03■■■□□ 2.08
AMT-240ENST00000636871 ADAMTS12P58397 1594 aa27.98■■■□□ 2.07
AMT-240ENST00000636871 ARAP1Q96P48 1450 aa27.96■■■□□ 2.07
AMT-240ENST00000636871 VPS8Q8N3P4 1428 aa27.95■■■□□ 2.06
AMT-240ENST00000636871 CTTNBP2Q8WZ74 1663 aa27.95■■■□□ 2.06
AMT-240ENST00000636871 PPARGC1BQ86YN6 1023 aaKnown RBP27.95■■■□□ 2.06
AMT-240ENST00000636871 FHAD1B1AJZ9 1412 aa27.95■■■□□ 2.06
AMT-240ENST00000636871 ARHGAP35Q9NRY4 1499 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms