RNA–Protein interactions for RNA: ENST00000637682.1

AMT-250, Transcript of aminomethyltransferase, humanhuman

TSL 5 BASIC

Gene AMT, Length 1,823 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-250ENST00000637682 NISCHQ9Y2I1 1504 aa40.5■■■■■ 4.07
AMT-250ENST00000637682 CCDC180Q9P1Z9 1646 aa35.46■■■■□ 3.27
AMT-250ENST00000637682 ZCCHC6Q5VYS8 1495 aaKnown RBP33.96■■■■□ 3.03
AMT-250ENST00000637682 ABCC9O60706 1549 aa33.8■■■■□ 3
AMT-250ENST00000637682 DCAF1Q9Y4B6 1507 aa33.52■■■□□ 2.96
AMT-250ENST00000637682 DCAF8L2P0C7V8 631 aa33.49■■■□□ 2.95
AMT-250ENST00000637682 MYO15BQ96JP2 1530 aa33.27■■■□□ 2.92
AMT-250ENST00000637682 NACADO15069 1562 aa33.12■■■□□ 2.89
AMT-250ENST00000637682 RB1CC1Q8TDY2 1594 aa32.9■■■□□ 2.86
AMT-250ENST00000637682 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
AMT-250ENST00000637682 SCRIBQ14160 1630 aa32.52■■■□□ 2.8
AMT-250ENST00000637682 UNC13AQ9UPW8 1703 aa32.16■■■□□ 2.74
AMT-250ENST00000637682 BICRAQ9NZM4 1560 aa31.91■■■□□ 2.7
AMT-250ENST00000637682 PABPN1Q86U42 306 aaKnown RBP eCLIP31.8■■■□□ 2.683e-6■■■■□ 23.3
AMT-250ENST00000637682 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
AMT-250ENST00000637682 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
AMT-250ENST00000637682 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
AMT-250ENST00000637682 RSF1Q96T23 1441 aaPredicted RBP31.28■■■□□ 2.6
AMT-250ENST00000637682 MROH2BQ7Z745 1585 aa31.25■■■□□ 2.59
AMT-250ENST00000637682 SMARCA4P51532 1647 aa31.18■■■□□ 2.58
AMT-250ENST00000637682 EIF4G1Q04637 1599 aaKnown RBP30.98■■■□□ 2.55
AMT-250ENST00000637682 WIZO95785 1651 aa30.95■■■□□ 2.55
AMT-250ENST00000637682 PEG3Q9GZU2 1588 aa30.86■■■□□ 2.53
AMT-250ENST00000637682 ATAD2BQ9ULI0 1458 aa30.77■■■□□ 2.52
AMT-250ENST00000637682 SMARCA2P51531 1590 aa30.75■■■□□ 2.51
AMT-250ENST00000637682 TOP2AP11388 1531 aaKnown RBP30.67■■■□□ 2.5
AMT-250ENST00000637682 NCAPD3P42695 1498 aa30.59■■■□□ 2.49
AMT-250ENST00000637682 CC2D2AQ9P2K1 1620 aa30.59■■■□□ 2.49
AMT-250ENST00000637682 BAZ1BQ9UIG0 1483 aaKnown RBP30.58■■■□□ 2.49
AMT-250ENST00000637682 HMGXB3Q12766 1538 aa30.51■■■□□ 2.47
AMT-250ENST00000637682 CCDC88BA6NC98 1476 aa30.33■■■□□ 2.45
AMT-250ENST00000637682 DNAJC5BQ9UF47 199 aa30.12■■■□□ 2.41
AMT-250ENST00000637682 CHIC1Q5VXU3 224 aa29.85■■■□□ 2.37
AMT-250ENST00000637682 CFTRP13569 1480 aa29.81■■■□□ 2.36
AMT-250ENST00000637682 CADPSQ9ULU8 1353 aa29.77■■■□□ 2.36
AMT-250ENST00000637682 LAMC3Q9Y6N6 1575 aa29.58■■■□□ 2.33
AMT-250ENST00000637682 PRDM2Q13029 1718 aa29.57■■■□□ 2.32
AMT-250ENST00000637682 NESP48681 1621 aa29.57■■■□□ 2.32
AMT-250ENST00000637682 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
AMT-250ENST00000637682 TRIM41Q8WV44 630 aa29.52■■■□□ 2.32
AMT-250ENST00000637682 WRNQ14191 1432 aaPredicted RBP eCLIP29.46■■■□□ 2.31
AMT-250ENST00000637682 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
AMT-250ENST00000637682 PDS5BQ9NTI5 1447 aa29.38■■■□□ 2.29
AMT-250ENST00000637682 SYNJ1O43426 1573 aa29.32■■■□□ 2.28
AMT-250ENST00000637682 CEP164Q9UPV0 1460 aa29.27■■■□□ 2.28
AMT-250ENST00000637682 CUX1P39880 1505 aa29.25■■■□□ 2.27
AMT-250ENST00000637682 TOP2BQ02880 1626 aa29.24■■■□□ 2.27
AMT-250ENST00000637682 BIVM-ERCC5R4GMW8 1640 aa29.21■■■□□ 2.27
AMT-250ENST00000637682 KIF21AQ7Z4S6 1674 aa29.19■■■□□ 2.26
AMT-250ENST00000637682 DNMBPQ6XZF7 1577 aa29.1■■■□□ 2.25
AMT-250ENST00000637682 URB2Q14146 1524 aaKnown RBP29.06■■■□□ 2.24
AMT-250ENST00000637682 TOPBP1Q92547 1522 aa29.06■■■□□ 2.24
AMT-250ENST00000637682 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
AMT-250ENST00000637682 MRC2Q9UBG0 1479 aa29.01■■■□□ 2.23
AMT-250ENST00000637682 FGD5Q6ZNL6 1462 aa28.98■■■□□ 2.23
AMT-250ENST00000637682 SOGA1O94964 1423 aa28.95■■■□□ 2.23
AMT-250ENST00000637682 FAM9AQ8IZU1 332 aaPredicted RBP28.92■■■□□ 2.22
AMT-250ENST00000637682 POLA1P09884 1462 aaPredicted RBP28.9■■■□□ 2.22
AMT-250ENST00000637682 EEA1Q15075 1411 aa28.89■■■□□ 2.21
AMT-250ENST00000637682 WDR62O43379 1518 aa28.87■■■□□ 2.21
AMT-250ENST00000637682 RUSC2Q8N2Y8 1516 aa28.85■■■□□ 2.21
AMT-250ENST00000637682 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
AMT-250ENST00000637682 RAD54L2Q9Y4B4 1467 aa28.78■■■□□ 2.2
AMT-250ENST00000637682 KIF27Q86VH2 1401 aa28.75■■■□□ 2.19
AMT-250ENST00000637682 ABCA10Q8WWZ4 1543 aa28.74■■■□□ 2.19
AMT-250ENST00000637682 CUX2O14529 1486 aa28.73■■■□□ 2.19
AMT-250ENST00000637682 CSRNP3Q8WYN3 585 aa28.73■■■□□ 2.19
AMT-250ENST00000637682 LOC105371045A0A1W2PR82 267 aa28.66■■■□□ 2.18
AMT-250ENST00000637682 TARBP1Q13395 1621 aaKnown RBP28.65■■■□□ 2.18
AMT-250ENST00000637682 WDR97A6NE52 1622 aa28.64■■■□□ 2.18
AMT-250ENST00000637682 IFT140Q96RY7 1462 aa28.61■■■□□ 2.17
AMT-250ENST00000637682 TDRD9Q8NDG6 1382 aaKnown RBP28.54■■■□□ 2.16
AMT-250ENST00000637682 IGF1RP08069 1367 aa28.53■■■□□ 2.16
AMT-250ENST00000637682 ABCA5Q8WWZ7 1642 aa28.51■■■□□ 2.15
AMT-250ENST00000637682 KIF21BO75037 1637 aa28.49■■■□□ 2.15
AMT-250ENST00000637682 EHMT2Q96KQ7 1210 aa28.48■■■□□ 2.15
AMT-250ENST00000637682 GAPVD1Q14C86 1478 aa28.48■■■□□ 2.15
AMT-250ENST00000637682 PRXQ9BXM0 1461 aa28.47■■■□□ 2.15
AMT-250ENST00000637682 GOLGA3Q08378 1498 aa28.44■■■□□ 2.14
AMT-250ENST00000637682 ZNF608Q9ULD9 1512 aaPredicted RBP28.43■■■□□ 2.14
AMT-250ENST00000637682 AQRO60306 1485 aaKnown RBP eCLIP28.41■■■□□ 2.148e-7■■■■□ 24.7
AMT-250ENST00000637682 ERICH3Q5RHP9 1530 aa28.4■■■□□ 2.14
AMT-250ENST00000637682 RAPGEF2Q9Y4G8 1499 aa28.39■■■□□ 2.14
AMT-250ENST00000637682 CARMIL1Q5VZK9 1371 aa28.37■■■□□ 2.13
AMT-250ENST00000637682 CUL7Q14999 1698 aa28.32■■■□□ 2.12
AMT-250ENST00000637682 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
AMT-250ENST00000637682 GRIN2BQ13224 1484 aa28.32■■■□□ 2.12
AMT-250ENST00000637682 UBTFP17480 764 aaKnown RBP28.3■■■□□ 2.12
AMT-250ENST00000637682 PBRM1Q86U86 1689 aa28.3■■■□□ 2.12
AMT-250ENST00000637682 TNIKQ9UKE5 1360 aa28.29■■■□□ 2.12
AMT-250ENST00000637682 FHAD1B1AJZ9 1412 aa28.19■■■□□ 2.1
AMT-250ENST00000637682 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
AMT-250ENST00000637682 SNAPC4Q5SXM2 1469 aa28.15■■■□□ 2.1
AMT-250ENST00000637682 MAGI1Q96QZ7 1491 aaPredicted RBP28.13■■■□□ 2.09
AMT-250ENST00000637682 CEP162Q5TB80 1403 aa28.1■■■□□ 2.09
AMT-250ENST00000637682 SYNJ2O15056 1496 aa28.01■■■□□ 2.08
AMT-250ENST00000637682 CLIP1P30622 1438 aa27.97■■■□□ 2.07
AMT-250ENST00000637682 GRIN2AQ12879 1464 aa27.97■■■□□ 2.07
AMT-250ENST00000637682 CHMP7Q8WUX9 453 aaPredicted RBP27.95■■■□□ 2.07
AMT-250ENST00000637682 CTTNBP2Q8WZ74 1663 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms