RNA–Protein interactions for RNA: ENST00000638092.1

AMT-257, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,448 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-257ENST00000638092 NISCHQ9Y2I1 1504 aa34.12■■■■□ 3.05
AMT-257ENST00000638092 CCDC180Q9P1Z9 1646 aa29.47■■■□□ 2.31
AMT-257ENST00000638092 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
AMT-257ENST00000638092 SHROOM4Q9ULL8 1493 aa28.3■■■□□ 2.12
AMT-257ENST00000638092 DCAF1Q9Y4B6 1507 aa28.29■■■□□ 2.12
AMT-257ENST00000638092 DCAF8L2P0C7V8 631 aa27.79■■■□□ 2.04
AMT-257ENST00000638092 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
AMT-257ENST00000638092 MYO15BQ96JP2 1530 aa27.65■■■□□ 2.02
AMT-257ENST00000638092 NACADO15069 1562 aa27.21■■□□□ 1.95
AMT-257ENST00000638092 ABCC9O60706 1549 aa27.19■■□□□ 1.94
AMT-257ENST00000638092 SCRIBQ14160 1630 aa27.11■■□□□ 1.93
AMT-257ENST00000638092 CHIC1Q5VXU3 224 aa26.94■■□□□ 1.9
AMT-257ENST00000638092 RB1CC1Q8TDY2 1594 aa26.78■■□□□ 1.88
AMT-257ENST00000638092 RSF1Q96T23 1441 aaPredicted RBP26.75■■□□□ 1.87
AMT-257ENST00000638092 CECR2Q9BXF3 1484 aa26.37■■□□□ 1.81
AMT-257ENST00000638092 MROH2BQ7Z745 1585 aa26.35■■□□□ 1.81
AMT-257ENST00000638092 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.8
AMT-257ENST00000638092 UNC13AQ9UPW8 1703 aa26.27■■□□□ 1.8
AMT-257ENST00000638092 WIZO95785 1651 aa26.21■■□□□ 1.79
AMT-257ENST00000638092 SMARCA4P51532 1647 aa26.08■■□□□ 1.77
AMT-257ENST00000638092 TRIM41Q8WV44 630 aa26■■□□□ 1.75
AMT-257ENST00000638092 TOP2AP11388 1531 aaKnown RBP26■■□□□ 1.75
AMT-257ENST00000638092 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
AMT-257ENST00000638092 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
AMT-257ENST00000638092 LOC105371045A0A1W2PR82 267 aa25.87■■□□□ 1.73
AMT-257ENST00000638092 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
AMT-257ENST00000638092 PEG3Q9GZU2 1588 aa25.75■■□□□ 1.71
AMT-257ENST00000638092 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
AMT-257ENST00000638092 HRCP23327 699 aa25.64■■□□□ 1.69
AMT-257ENST00000638092 PCGF6Q9BYE7 350 aa25.63■■□□□ 1.69
AMT-257ENST00000638092 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.683e-6■■■■□ 23.3
AMT-257ENST00000638092 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
AMT-257ENST00000638092 FAM9AQ8IZU1 332 aaPredicted RBP25.47■■□□□ 1.67
AMT-257ENST00000638092 ABCC8Q09428 1581 aa25.41■■□□□ 1.66
AMT-257ENST00000638092 ATAD2BQ9ULI0 1458 aa25.4■■□□□ 1.66
AMT-257ENST00000638092 EEA1Q15075 1411 aa25.36■■□□□ 1.65
AMT-257ENST00000638092 BAZ1BQ9UIG0 1483 aaKnown RBP25.34■■□□□ 1.65
AMT-257ENST00000638092 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
AMT-257ENST00000638092 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
AMT-257ENST00000638092 SOGA1O94964 1423 aa25.08■■□□□ 1.61
AMT-257ENST00000638092 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
AMT-257ENST00000638092 TNIKQ9UKE5 1360 aa25.06■■□□□ 1.6
AMT-257ENST00000638092 SYNJ1O43426 1573 aa25.04■■□□□ 1.6
AMT-257ENST00000638092 CSRNP3Q8WYN3 585 aa25.02■■□□□ 1.6
AMT-257ENST00000638092 ZEB1P37275 1124 aaPredicted RBP25.02■■□□□ 1.6
AMT-257ENST00000638092 EHMT2Q96KQ7 1210 aa25.02■■□□□ 1.6
AMT-257ENST00000638092 GOLGA3Q08378 1498 aa25■■□□□ 1.59
AMT-257ENST00000638092 KIF21BO75037 1637 aa24.97■■□□□ 1.59
AMT-257ENST00000638092 CEP162Q5TB80 1403 aa24.96■■□□□ 1.59
AMT-257ENST00000638092 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
AMT-257ENST00000638092 CEP164Q9UPV0 1460 aa24.92■■□□□ 1.58
AMT-257ENST00000638092 BIVM-ERCC5R4GMW8 1640 aa24.92■■□□□ 1.58
AMT-257ENST00000638092 RUSC2Q8N2Y8 1516 aa24.91■■□□□ 1.58
AMT-257ENST00000638092 PRDM2Q13029 1718 aa24.79■■□□□ 1.56
AMT-257ENST00000638092 PPARGC1BQ86YN6 1023 aaKnown RBP24.77■■□□□ 1.56
AMT-257ENST00000638092 UBTFP17480 764 aaKnown RBP24.76■■□□□ 1.55
AMT-257ENST00000638092 CFTRP13569 1480 aa24.74■■□□□ 1.55
AMT-257ENST00000638092 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
AMT-257ENST00000638092 CUX1P39880 1505 aa24.6■■□□□ 1.53
AMT-257ENST00000638092 CLIP1P30622 1438 aa24.58■■□□□ 1.53
AMT-257ENST00000638092 RAPGEF2Q9Y4G8 1499 aa24.56■■□□□ 1.52
AMT-257ENST00000638092 PRXQ9BXM0 1461 aa24.52■■□□□ 1.52
AMT-257ENST00000638092 VPS8Q8N3P4 1428 aa24.52■■□□□ 1.52
AMT-257ENST00000638092 KIF27Q86VH2 1401 aa24.5■■□□□ 1.51
AMT-257ENST00000638092 CC2D2AQ9P2K1 1620 aa24.48■■□□□ 1.51
AMT-257ENST00000638092 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
AMT-257ENST00000638092 CCER1Q8TC90 406 aaPredicted RBP24.34■■□□□ 1.49
AMT-257ENST00000638092 APLP2Q06481 763 aa24.31■■□□□ 1.48
AMT-257ENST00000638092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.26■■□□□ 1.47
AMT-257ENST00000638092 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
AMT-257ENST00000638092 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
AMT-257ENST00000638092 CUX2O14529 1486 aa24.21■■□□□ 1.47
AMT-257ENST00000638092 TTBK1Q5TCY1 1321 aaPredicted RBP24.2■■□□□ 1.47
AMT-257ENST00000638092 FANCD2Q9BXW9 1451 aa24.2■■□□□ 1.46
AMT-257ENST00000638092 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
AMT-257ENST00000638092 LAMC3Q9Y6N6 1575 aa24.13■■□□□ 1.45
AMT-257ENST00000638092 IGF1RP08069 1367 aa24.13■■□□□ 1.45
AMT-257ENST00000638092 ARHGAP35Q9NRY4 1499 aa24.07■■□□□ 1.44
AMT-257ENST00000638092 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
AMT-257ENST00000638092 CARMIL1Q5VZK9 1371 aa24.05■■□□□ 1.44
AMT-257ENST00000638092 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
AMT-257ENST00000638092 MAP3K1Q13233 1512 aa24.01■■□□□ 1.43
AMT-257ENST00000638092 CUL7Q14999 1698 aa24.01■■□□□ 1.43
AMT-257ENST00000638092 RANGAP1P46060 587 aaPredicted RBP24.01■■□□□ 1.43
AMT-257ENST00000638092 POLA1P09884 1462 aaPredicted RBP23.97■■□□□ 1.43
AMT-257ENST00000638092 WDR97A6NE52 1622 aa23.94■■□□□ 1.42
AMT-257ENST00000638092 RRBP1Q9P2E9 1410 aaKnown RBP23.93■■□□□ 1.42
AMT-257ENST00000638092 NESP48681 1621 aa23.92■■□□□ 1.42
AMT-257ENST00000638092 HNRNPUL2Q1KMD3 747 aaKnown RBP23.91■■□□□ 1.42
AMT-257ENST00000638092 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.41
AMT-257ENST00000638092 PDS5BQ9NTI5 1447 aa23.88■■□□□ 1.41
AMT-257ENST00000638092 EFCAB5A4FU69 1503 aa23.88■■□□□ 1.41
AMT-257ENST00000638092 TIAM1Q13009 1591 aa23.87■■□□□ 1.41
AMT-257ENST00000638092 CTTNBP2Q8WZ74 1663 aa23.87■■□□□ 1.41
AMT-257ENST00000638092 CLSPNQ9HAW4 1339 aa23.86■■□□□ 1.41
AMT-257ENST00000638092 RAD54L2Q9Y4B4 1467 aa23.85■■□□□ 1.41
AMT-257ENST00000638092 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.41
AMT-257ENST00000638092 KANK4Q5T7N3 995 aaPredicted RBP23.82■■□□□ 1.4
AMT-257ENST00000638092 CFAP43Q8NDM7 1665 aa23.81■■□□□ 1.4
AMT-257ENST00000638092 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms