RNA–Protein interactions for RNA: ENST00000638063.1

AMT-256, Transcript of aminomethyltransferase, humanhuman

TSL 5 BASIC

Gene AMT, Length 1,783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-256ENST00000638063 NISCHQ9Y2I1 1504 aa33.25■■■□□ 2.91
AMT-256ENST00000638063 CCDC180Q9P1Z9 1646 aa29.32■■■□□ 2.28
AMT-256ENST00000638063 ABCC9O60706 1549 aa27.88■■■□□ 2.05
AMT-256ENST00000638063 ZCCHC6Q5VYS8 1495 aaKnown RBP27.86■■■□□ 2.05
AMT-256ENST00000638063 DCAF1Q9Y4B6 1507 aa27.61■■■□□ 2.01
AMT-256ENST00000638063 MYO15BQ96JP2 1530 aa27.5■■□□□ 1.99
AMT-256ENST00000638063 NACADO15069 1562 aa27.38■■□□□ 1.97
AMT-256ENST00000638063 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
AMT-256ENST00000638063 RB1CC1Q8TDY2 1594 aa27.23■■□□□ 1.95
AMT-256ENST00000638063 SCRIBQ14160 1630 aa26.71■■□□□ 1.87
AMT-256ENST00000638063 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
AMT-256ENST00000638063 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
AMT-256ENST00000638063 BICRAQ9NZM4 1560 aa26.34■■□□□ 1.81
AMT-256ENST00000638063 PABPN1Q86U42 306 aaKnown RBP eCLIP26.12■■□□□ 1.773e-6■■■■□ 23.3
AMT-256ENST00000638063 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
AMT-256ENST00000638063 CECR2Q9BXF3 1484 aa25.77■■□□□ 1.72
AMT-256ENST00000638063 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
AMT-256ENST00000638063 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
AMT-256ENST00000638063 EIF4G1Q04637 1599 aaKnown RBP25.6■■□□□ 1.69
AMT-256ENST00000638063 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
AMT-256ENST00000638063 RSF1Q96T23 1441 aaPredicted RBP25.57■■□□□ 1.68
AMT-256ENST00000638063 PEG3Q9GZU2 1588 aa25.45■■□□□ 1.66
AMT-256ENST00000638063 SMARCA2P51531 1590 aa25.37■■□□□ 1.65
AMT-256ENST00000638063 WIZO95785 1651 aa25.37■■□□□ 1.65
AMT-256ENST00000638063 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
AMT-256ENST00000638063 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.64
AMT-256ENST00000638063 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
AMT-256ENST00000638063 NCAPD3P42695 1498 aa25.23■■□□□ 1.63
AMT-256ENST00000638063 HMGXB3Q12766 1538 aa25.2■■□□□ 1.62
AMT-256ENST00000638063 TOP2AP11388 1531 aaKnown RBP25.18■■□□□ 1.62
AMT-256ENST00000638063 BAZ1BQ9UIG0 1483 aaKnown RBP25.16■■□□□ 1.62
AMT-256ENST00000638063 CCDC88BA6NC98 1476 aa24.84■■□□□ 1.57
AMT-256ENST00000638063 CFTRP13569 1480 aa24.53■■□□□ 1.52
AMT-256ENST00000638063 CADPSQ9ULU8 1353 aa24.51■■□□□ 1.51
AMT-256ENST00000638063 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
AMT-256ENST00000638063 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
AMT-256ENST00000638063 NESP48681 1621 aa24.34■■□□□ 1.49
AMT-256ENST00000638063 PDS5BQ9NTI5 1447 aa24.26■■□□□ 1.47
AMT-256ENST00000638063 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
AMT-256ENST00000638063 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.46
AMT-256ENST00000638063 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
AMT-256ENST00000638063 KIF21AQ7Z4S6 1674 aa24.12■■□□□ 1.45
AMT-256ENST00000638063 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
AMT-256ENST00000638063 WRNQ14191 1432 aaPredicted RBP eCLIP24.11■■□□□ 1.45
AMT-256ENST00000638063 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
AMT-256ENST00000638063 TOP2BQ02880 1626 aa24.01■■□□□ 1.43
AMT-256ENST00000638063 BIVM-ERCC5R4GMW8 1640 aa24.01■■□□□ 1.43
AMT-256ENST00000638063 ERCC6Q03468 1493 aa24■■□□□ 1.43
AMT-256ENST00000638063 SYNJ1O43426 1573 aa24■■□□□ 1.43
AMT-256ENST00000638063 CUX1P39880 1505 aa23.99■■□□□ 1.43
AMT-256ENST00000638063 DNMBPQ6XZF7 1577 aa23.97■■□□□ 1.43
AMT-256ENST00000638063 TRIM41Q8WV44 630 aa23.97■■□□□ 1.43
AMT-256ENST00000638063 MRC2Q9UBG0 1479 aa23.95■■□□□ 1.43
AMT-256ENST00000638063 URB2Q14146 1524 aaKnown RBP23.93■■□□□ 1.42
AMT-256ENST00000638063 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
AMT-256ENST00000638063 THOC2Q8NI27 1593 aaKnown RBP23.89■■□□□ 1.41
AMT-256ENST00000638063 WDR62O43379 1518 aa23.88■■□□□ 1.41
AMT-256ENST00000638063 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
AMT-256ENST00000638063 CUX2O14529 1486 aa23.79■■□□□ 1.4
AMT-256ENST00000638063 POLA1P09884 1462 aaPredicted RBP23.76■■□□□ 1.39
AMT-256ENST00000638063 SOGA1O94964 1423 aa23.66■■□□□ 1.38
AMT-256ENST00000638063 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
AMT-256ENST00000638063 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
AMT-256ENST00000638063 EEA1Q15075 1411 aa23.62■■□□□ 1.37
AMT-256ENST00000638063 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
AMT-256ENST00000638063 IFT140Q96RY7 1462 aa23.61■■□□□ 1.37
AMT-256ENST00000638063 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
AMT-256ENST00000638063 KIF27Q86VH2 1401 aa23.55■■□□□ 1.36
AMT-256ENST00000638063 ABCA5Q8WWZ7 1642 aa23.49■■□□□ 1.35
AMT-256ENST00000638063 RUSC2Q8N2Y8 1516 aa23.48■■□□□ 1.35
AMT-256ENST00000638063 GAPVD1Q14C86 1478 aa23.42■■□□□ 1.34
AMT-256ENST00000638063 TDRD9Q8NDG6 1382 aaKnown RBP23.41■■□□□ 1.34
AMT-256ENST00000638063 CSRNP3Q8WYN3 585 aa23.4■■□□□ 1.34
AMT-256ENST00000638063 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.34
AMT-256ENST00000638063 EIF4G3O43432 1585 aaKnown RBP23.38■■□□□ 1.33
AMT-256ENST00000638063 FAM9AQ8IZU1 332 aaPredicted RBP23.38■■□□□ 1.33
AMT-256ENST00000638063 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
AMT-256ENST00000638063 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
AMT-256ENST00000638063 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.338e-7■■■■□ 24.7
AMT-256ENST00000638063 IGF1RP08069 1367 aa23.35■■□□□ 1.33
AMT-256ENST00000638063 GRIN2BQ13224 1484 aa23.33■■□□□ 1.32
AMT-256ENST00000638063 CUL7Q14999 1698 aa23.32■■□□□ 1.32
AMT-256ENST00000638063 KIF21BO75037 1637 aa23.3■■□□□ 1.32
AMT-256ENST00000638063 PRXQ9BXM0 1461 aa23.28■■□□□ 1.32
AMT-256ENST00000638063 CARMIL1Q5VZK9 1371 aa23.23■■□□□ 1.31
AMT-256ENST00000638063 MAGI1Q96QZ7 1491 aaPredicted RBP23.22■■□□□ 1.31
AMT-256ENST00000638063 ADAMTS12P58397 1594 aa23.2■■□□□ 1.3
AMT-256ENST00000638063 GOLGA3Q08378 1498 aa23.2■■□□□ 1.3
AMT-256ENST00000638063 RAPGEF2Q9Y4G8 1499 aa23.19■■□□□ 1.3
AMT-256ENST00000638063 FHAD1B1AJZ9 1412 aa23.18■■□□□ 1.3
AMT-256ENST00000638063 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
AMT-256ENST00000638063 SYNJ2O15056 1496 aa23.1■■□□□ 1.29
AMT-256ENST00000638063 LOC105371045A0A1W2PR82 267 aa23.06■■□□□ 1.28
AMT-256ENST00000638063 TNIKQ9UKE5 1360 aa23.03■■□□□ 1.28
AMT-256ENST00000638063 GRIN2AQ12879 1464 aa23.03■■□□□ 1.28
AMT-256ENST00000638063 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
AMT-256ENST00000638063 CHMP7Q8WUX9 453 aaPredicted RBP22.99■■□□□ 1.27
AMT-256ENST00000638063 CTTNBP2Q8WZ74 1663 aa22.97■■□□□ 1.27
AMT-256ENST00000638063 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
AMT-256ENST00000638063 CHD1O14646 1710 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms