RNA–Protein interactions for RNA: ENST00000637527.1

AMT-249, Transcript of aminomethyltransferase, humanhuman

TSL 2

Gene AMT, Length 1,174 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-249ENST00000637527 NISCHQ9Y2I1 1504 aa51.59■■■■■ 5.85
AMT-249ENST00000637527 CCDC180Q9P1Z9 1646 aa46.04■■■■■ 4.96
AMT-249ENST00000637527 ABCC9O60706 1549 aa44.96■■■■■ 4.79
AMT-249ENST00000637527 RB1CC1Q8TDY2 1594 aa43.35■■■■■ 4.53
AMT-249ENST00000637527 NACADO15069 1562 aa43.28■■■■■ 4.52
AMT-249ENST00000637527 MYO15BQ96JP2 1530 aa43.05■■■■■ 4.48
AMT-249ENST00000637527 ZCCHC6Q5VYS8 1495 aaKnown RBP42.98■■■■■ 4.47
AMT-249ENST00000637527 DCAF8L2P0C7V8 631 aa42.92■■■■■ 4.46
AMT-249ENST00000637527 DCAF1Q9Y4B6 1507 aa42.8■■■■■ 4.44
AMT-249ENST00000637527 UNC13AQ9UPW8 1703 aa42.31■■■■■ 4.36
AMT-249ENST00000637527 BICRAQ9NZM4 1560 aa41.97■■■■■ 4.31
AMT-249ENST00000637527 PABPN1Q86U42 306 aaKnown RBP eCLIP41.89■■■■■ 4.3
AMT-249ENST00000637527 SCRIBQ14160 1630 aa41.84■■■■■ 4.29
AMT-249ENST00000637527 SHROOM4Q9ULL8 1493 aa41.72■■■■■ 4.27
AMT-249ENST00000637527 DNAJC5BQ9UF47 199 aa41.26■■■■■ 4.2
AMT-249ENST00000637527 EIF4G1Q04637 1599 aaKnown RBP40.9■■■■■ 4.14
AMT-249ENST00000637527 CC2D2AQ9P2K1 1620 aa40.74■■■■■ 4.11
AMT-249ENST00000637527 CECR2Q9BXF3 1484 aa40.46■■■■■ 4.07
AMT-249ENST00000637527 SMARCA4P51532 1647 aa40.07■■■■■ 4.01
AMT-249ENST00000637527 BAZ1AQ9NRL2 1556 aaPredicted RBP40.05■■■■■ 4
AMT-249ENST00000637527 NCAPD3P42695 1498 aa39.89■■■■□ 3.98
AMT-249ENST00000637527 SMARCA2P51531 1590 aa39.89■■■■□ 3.98
AMT-249ENST00000637527 ATAD2BQ9ULI0 1458 aa39.86■■■■□ 3.97
AMT-249ENST00000637527 PEG3Q9GZU2 1588 aa39.76■■■■□ 3.95
AMT-249ENST00000637527 HMGXB3Q12766 1538 aa39.75■■■■□ 3.95
AMT-249ENST00000637527 MROH2BQ7Z745 1585 aa39.69■■■■□ 3.94
AMT-249ENST00000637527 BAZ1BQ9UIG0 1483 aaKnown RBP39.54■■■■□ 3.92
AMT-249ENST00000637527 WIZO95785 1651 aa39.26■■■■□ 3.88
AMT-249ENST00000637527 RSF1Q96T23 1441 aaPredicted RBP39.2■■■■□ 3.87
AMT-249ENST00000637527 TOP2AP11388 1531 aaKnown RBP38.93■■■■□ 3.82
AMT-249ENST00000637527 LAMC3Q9Y6N6 1575 aa38.91■■■■□ 3.82
AMT-249ENST00000637527 NESP48681 1621 aa38.85■■■■□ 3.81
AMT-249ENST00000637527 ERCC6Q03468 1493 aa38.83■■■■□ 3.81
AMT-249ENST00000637527 CADPSQ9ULU8 1353 aa38.69■■■■□ 3.78
AMT-249ENST00000637527 PDS5BQ9NTI5 1447 aa38.61■■■■□ 3.77
AMT-249ENST00000637527 CUX2O14529 1486 aa38.55■■■■□ 3.76
AMT-249ENST00000637527 KIF21AQ7Z4S6 1674 aa38.48■■■■□ 3.75
AMT-249ENST00000637527 CFTRP13569 1480 aa38.46■■■■□ 3.75
AMT-249ENST00000637527 THOC2Q8NI27 1593 aaKnown RBP38.42■■■■□ 3.74
AMT-249ENST00000637527 CCDC88BA6NC98 1476 aa38.38■■■■□ 3.73
AMT-249ENST00000637527 PRDM2Q13029 1718 aa38.24■■■■□ 3.71
AMT-249ENST00000637527 FANCD2Q9BXW9 1451 aa38.24■■■■□ 3.71
AMT-249ENST00000637527 CEP164Q9UPV0 1460 aa38.24■■■■□ 3.71
AMT-249ENST00000637527 MRC2Q9UBG0 1479 aa38.21■■■■□ 3.71
AMT-249ENST00000637527 WDR62O43379 1518 aa38.12■■■■□ 3.69
AMT-249ENST00000637527 SUPT5HO00267 1087 aaKnown RBP37.96■■■■□ 3.67
AMT-249ENST00000637527 URB2Q14146 1524 aaKnown RBP37.85■■■■□ 3.65
AMT-249ENST00000637527 ABCC8Q09428 1581 aa37.71■■■■□ 3.63
AMT-249ENST00000637527 TOPBP1Q92547 1522 aa37.62■■■■□ 3.61
AMT-249ENST00000637527 DNMBPQ6XZF7 1577 aa37.61■■■■□ 3.61
AMT-249ENST00000637527 IFT140Q96RY7 1462 aa37.45■■■■□ 3.59
AMT-249ENST00000637527 DNAJC5Q9H3Z4 198 aa37.38■■■■□ 3.57
AMT-249ENST00000637527 POLA1P09884 1462 aaPredicted RBP37.29■■■■□ 3.56
AMT-249ENST00000637527 CUX1P39880 1505 aa37.26■■■■□ 3.56
AMT-249ENST00000637527 TARBP1Q13395 1621 aaKnown RBP37.25■■■■□ 3.55
AMT-249ENST00000637527 ZNF608Q9ULD9 1512 aaPredicted RBP37.19■■■■□ 3.54
AMT-249ENST00000637527 FGD5Q6ZNL6 1462 aa37.16■■■■□ 3.54
AMT-249ENST00000637527 EIF4G3O43432 1585 aaKnown RBP37.14■■■■□ 3.54
AMT-249ENST00000637527 SOGA1O94964 1423 aa37.1■■■■□ 3.53
AMT-249ENST00000637527 WDR97A6NE52 1622 aa37.09■■■■□ 3.53
AMT-249ENST00000637527 RAD54L2Q9Y4B4 1467 aa37.05■■■■□ 3.52
AMT-249ENST00000637527 WRNQ14191 1432 aaPredicted RBP eCLIP37■■■■□ 3.51
AMT-249ENST00000637527 BIVM-ERCC5R4GMW8 1640 aa36.99■■■■□ 3.51
AMT-249ENST00000637527 TOP2BQ02880 1626 aa36.98■■■■□ 3.51
AMT-249ENST00000637527 AQRO60306 1485 aaKnown RBP eCLIP36.95■■■■□ 3.51
AMT-249ENST00000637527 SYNJ1O43426 1573 aa36.9■■■■□ 3.5
AMT-249ENST00000637527 ABCA10Q8WWZ4 1543 aa36.85■■■■□ 3.49
AMT-249ENST00000637527 TDRD9Q8NDG6 1382 aaKnown RBP36.85■■■■□ 3.49
AMT-249ENST00000637527 OSCARQ8IYS5 282 aa36.81■■■■□ 3.48
AMT-249ENST00000637527 GRIN2BQ13224 1484 aa36.75■■■■□ 3.47
AMT-249ENST00000637527 ABCA5Q8WWZ7 1642 aa36.74■■■■□ 3.47
AMT-249ENST00000637527 GAPVD1Q14C86 1478 aa36.7■■■■□ 3.47
AMT-249ENST00000637527 MAGI1Q96QZ7 1491 aaPredicted RBP36.7■■■■□ 3.47
AMT-249ENST00000637527 PBRM1Q86U86 1689 aa36.68■■■■□ 3.46
AMT-249ENST00000637527 CHD1O14646 1710 aa36.67■■■■□ 3.46
AMT-249ENST00000637527 SNAPC4Q5SXM2 1469 aa36.67■■■■□ 3.46
AMT-249ENST00000637527 SYNJ2O15056 1496 aa36.53■■■■□ 3.44
AMT-249ENST00000637527 FBLN2P98095 1184 aa36.48■■■■□ 3.43
AMT-249ENST00000637527 ERICH3Q5RHP9 1530 aa36.44■■■■□ 3.42
AMT-249ENST00000637527 CHMP7Q8WUX9 453 aaPredicted RBP36.43■■■■□ 3.42
AMT-249ENST00000637527 ADAMTS12P58397 1594 aa36.38■■■■□ 3.41
AMT-249ENST00000637527 CLASP1Q7Z460 1538 aa36.31■■■■□ 3.4
AMT-249ENST00000637527 FHAD1B1AJZ9 1412 aa36.3■■■■□ 3.4
AMT-249ENST00000637527 RIMBP3CA6NJZ7 1639 aa36.27■■■■□ 3.4
AMT-249ENST00000637527 RIMBP3BA6NNM3 1639 aa36.27■■■■□ 3.4
AMT-249ENST00000637527 RIMBP3Q9UFD9 1639 aa36.27■■■■□ 3.4
AMT-249ENST00000637527 GRIN2AQ12879 1464 aa36.27■■■■□ 3.4
AMT-249ENST00000637527 ARHGEF11O15085 1522 aa36.27■■■■□ 3.4
AMT-249ENST00000637527 KIF27Q86VH2 1401 aa36.25■■■■□ 3.39
AMT-249ENST00000637527 NUP160Q12769 1436 aa36.12■■■■□ 3.37
AMT-249ENST00000637527 CUL7Q14999 1698 aa36.11■■■■□ 3.37
AMT-249ENST00000637527 CEP170Q5SW79 1584 aa36.07■■■■□ 3.37
AMT-249ENST00000637527 IGF1RP08069 1367 aa36.05■■■■□ 3.36
AMT-249ENST00000637527 TRIM41Q8WV44 630 aa36■■■■□ 3.35
AMT-249ENST00000637527 ARAP1Q96P48 1450 aa35.94■■■■□ 3.34
AMT-249ENST00000637527 SHROOM2Q13796 1616 aa35.9■■■■□ 3.34
AMT-249ENST00000637527 RUSC2Q8N2Y8 1516 aa35.86■■■■□ 3.33
AMT-249ENST00000637527 CARMIL1Q5VZK9 1371 aa35.85■■■■□ 3.33
AMT-249ENST00000637527 CYB5RLQ6IPT4 315 aa35.81■■■■□ 3.32
AMT-249ENST00000637527 KIAA0586Q9BVV6 1533 aa35.74■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 312.2 ms