RNA–Protein interactions for RNA: ENST00000476127.6

AMT-211, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,152 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-211ENST00000476127 NISCHQ9Y2I1 1504 aa36.43■■■■□ 3.42
AMT-211ENST00000476127 CCDC180Q9P1Z9 1646 aa32.1■■■□□ 2.73
AMT-211ENST00000476127 ABCC9O60706 1549 aa30.67■■■□□ 2.5
AMT-211ENST00000476127 ZCCHC6Q5VYS8 1495 aaKnown RBP30.54■■■□□ 2.48
AMT-211ENST00000476127 DCAF1Q9Y4B6 1507 aa30.13■■■□□ 2.41
AMT-211ENST00000476127 DCAF8L2P0C7V8 631 aa30.09■■■□□ 2.41
AMT-211ENST00000476127 MYO15BQ96JP2 1530 aa29.93■■■□□ 2.38
AMT-211ENST00000476127 NACADO15069 1562 aa29.92■■■□□ 2.38
AMT-211ENST00000476127 RB1CC1Q8TDY2 1594 aa29.79■■■□□ 2.36
AMT-211ENST00000476127 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
AMT-211ENST00000476127 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
AMT-211ENST00000476127 SHROOM4Q9ULL8 1493 aa29.33■■■□□ 2.29
AMT-211ENST00000476127 BICRAQ9NZM4 1560 aa28.94■■■□□ 2.22
AMT-211ENST00000476127 PABPN1Q86U42 306 aaKnown RBP eCLIP28.75■■■□□ 2.193e-6■■■■□ 23.3
AMT-211ENST00000476127 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
AMT-211ENST00000476127 BAZ1AQ9NRL2 1556 aaPredicted RBP28.17■■■□□ 2.1
AMT-211ENST00000476127 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
AMT-211ENST00000476127 MROH2BQ7Z745 1585 aa28.15■■■□□ 2.1
AMT-211ENST00000476127 EIF4G1Q04637 1599 aaKnown RBP28.08■■■□□ 2.09
AMT-211ENST00000476127 RSF1Q96T23 1441 aaPredicted RBP28.04■■■□□ 2.08
AMT-211ENST00000476127 WIZO95785 1651 aa27.95■■■□□ 2.06
AMT-211ENST00000476127 SUPT5HO00267 1087 aaKnown RBP27.92■■■□□ 2.06
AMT-211ENST00000476127 PEG3Q9GZU2 1588 aa27.82■■■□□ 2.04
AMT-211ENST00000476127 CC2D2AQ9P2K1 1620 aa27.8■■■□□ 2.04
AMT-211ENST00000476127 ATAD2BQ9ULI0 1458 aa27.74■■■□□ 2.03
AMT-211ENST00000476127 SMARCA2P51531 1590 aa27.74■■■□□ 2.03
AMT-211ENST00000476127 TOP2AP11388 1531 aaKnown RBP27.61■■■□□ 2.01
AMT-211ENST00000476127 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
AMT-211ENST00000476127 NCAPD3P42695 1498 aa27.56■■■□□ 2
AMT-211ENST00000476127 HMGXB3Q12766 1538 aa27.56■■■□□ 2
AMT-211ENST00000476127 DNAJC5BQ9UF47 199 aa27.42■■□□□ 1.98
AMT-211ENST00000476127 CCDC88BA6NC98 1476 aa27.26■■□□□ 1.95
AMT-211ENST00000476127 PRDM2Q13029 1718 aa26.88■■□□□ 1.89
AMT-211ENST00000476127 CFTRP13569 1480 aa26.83■■□□□ 1.89
AMT-211ENST00000476127 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
AMT-211ENST00000476127 NESP48681 1621 aa26.8■■□□□ 1.88
AMT-211ENST00000476127 LAMC3Q9Y6N6 1575 aa26.77■■□□□ 1.88
AMT-211ENST00000476127 ABCC8Q09428 1581 aa26.6■■□□□ 1.85
AMT-211ENST00000476127 KIF21AQ7Z4S6 1674 aa26.59■■□□□ 1.85
AMT-211ENST00000476127 FANCD2Q9BXW9 1451 aa26.55■■□□□ 1.84
AMT-211ENST00000476127 PDS5BQ9NTI5 1447 aa26.49■■□□□ 1.83
AMT-211ENST00000476127 CHIC1Q5VXU3 224 aa26.48■■□□□ 1.83
AMT-211ENST00000476127 CEP164Q9UPV0 1460 aa26.45■■□□□ 1.82
AMT-211ENST00000476127 SYNJ1O43426 1573 aa26.41■■□□□ 1.82
AMT-211ENST00000476127 WRNQ14191 1432 aaPredicted RBP eCLIP26.4■■□□□ 1.82
AMT-211ENST00000476127 CUX1P39880 1505 aa26.36■■□□□ 1.81
AMT-211ENST00000476127 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
AMT-211ENST00000476127 ERCC6Q03468 1493 aa26.32■■□□□ 1.8
AMT-211ENST00000476127 TOP2BQ02880 1626 aa26.32■■□□□ 1.8
AMT-211ENST00000476127 URB2Q14146 1524 aaKnown RBP26.28■■□□□ 1.8
AMT-211ENST00000476127 DNMBPQ6XZF7 1577 aa26.28■■□□□ 1.8
AMT-211ENST00000476127 TRIM41Q8WV44 630 aa26.27■■□□□ 1.8
AMT-211ENST00000476127 THOC2Q8NI27 1593 aaKnown RBP26.25■■□□□ 1.79
AMT-211ENST00000476127 MRC2Q9UBG0 1479 aa26.24■■□□□ 1.79
AMT-211ENST00000476127 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
AMT-211ENST00000476127 WDR62O43379 1518 aa26.16■■□□□ 1.78
AMT-211ENST00000476127 FGD5Q6ZNL6 1462 aa26.13■■□□□ 1.77
AMT-211ENST00000476127 POLA1P09884 1462 aaPredicted RBP26.07■■□□□ 1.76
AMT-211ENST00000476127 WDR97A6NE52 1622 aa25.98■■□□□ 1.75
AMT-211ENST00000476127 HRCP23327 699 aa25.97■■□□□ 1.75
AMT-211ENST00000476127 RAD54L2Q9Y4B4 1467 aa25.96■■□□□ 1.75
AMT-211ENST00000476127 CUX2O14529 1486 aa25.93■■□□□ 1.74
AMT-211ENST00000476127 TARBP1Q13395 1621 aaKnown RBP25.93■■□□□ 1.74
AMT-211ENST00000476127 SOGA1O94964 1423 aa25.92■■□□□ 1.74
AMT-211ENST00000476127 RUSC2Q8N2Y8 1516 aa25.89■■□□□ 1.74
AMT-211ENST00000476127 ABCA10Q8WWZ4 1543 aa25.87■■□□□ 1.73
AMT-211ENST00000476127 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
AMT-211ENST00000476127 FAM9AQ8IZU1 332 aaPredicted RBP25.8■■□□□ 1.72
AMT-211ENST00000476127 ABCA5Q8WWZ7 1642 aa25.78■■□□□ 1.72
AMT-211ENST00000476127 KIF27Q86VH2 1401 aa25.76■■□□□ 1.71
AMT-211ENST00000476127 EEA1Q15075 1411 aa25.75■■□□□ 1.71
AMT-211ENST00000476127 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
AMT-211ENST00000476127 PBRM1Q86U86 1689 aa25.7■■□□□ 1.71
AMT-211ENST00000476127 EIF4G3O43432 1585 aaKnown RBP25.7■■□□□ 1.7
AMT-211ENST00000476127 TDRD9Q8NDG6 1382 aaKnown RBP25.7■■□□□ 1.7
AMT-211ENST00000476127 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
AMT-211ENST00000476127 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.78e-7■■■■□ 24.7
AMT-211ENST00000476127 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
AMT-211ENST00000476127 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
AMT-211ENST00000476127 IGF1RP08069 1367 aa25.56■■□□□ 1.68
AMT-211ENST00000476127 KIF21BO75037 1637 aa25.55■■□□□ 1.68
AMT-211ENST00000476127 CUL7Q14999 1698 aa25.54■■□□□ 1.68
AMT-211ENST00000476127 GRIN2BQ13224 1484 aa25.52■■□□□ 1.68
AMT-211ENST00000476127 PRXQ9BXM0 1461 aa25.49■■□□□ 1.67
AMT-211ENST00000476127 ADAMTS12P58397 1594 aa25.47■■□□□ 1.67
AMT-211ENST00000476127 EHMT2Q96KQ7 1210 aa25.46■■□□□ 1.67
AMT-211ENST00000476127 SNAPC4Q5SXM2 1469 aa25.45■■□□□ 1.66
AMT-211ENST00000476127 LOC105371045A0A1W2PR82 267 aa25.44■■□□□ 1.66
AMT-211ENST00000476127 RAPGEF2Q9Y4G8 1499 aa25.44■■□□□ 1.66
AMT-211ENST00000476127 PCGF6Q9BYE7 350 aa25.43■■□□□ 1.66
AMT-211ENST00000476127 CARMIL1Q5VZK9 1371 aa25.43■■□□□ 1.66
AMT-211ENST00000476127 GOLGA3Q08378 1498 aa25.41■■□□□ 1.66
AMT-211ENST00000476127 MAGI1Q96QZ7 1491 aaPredicted RBP25.38■■□□□ 1.65
AMT-211ENST00000476127 FHAD1B1AJZ9 1412 aa25.35■■□□□ 1.65
AMT-211ENST00000476127 CHD1O14646 1710 aa25.29■■□□□ 1.64
AMT-211ENST00000476127 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
AMT-211ENST00000476127 CTTNBP2Q8WZ74 1663 aa25.26■■□□□ 1.63
AMT-211ENST00000476127 GRIN2AQ12879 1464 aa25.23■■□□□ 1.63
AMT-211ENST00000476127 UBTFP17480 764 aaKnown RBP25.22■■□□□ 1.63
AMT-211ENST00000476127 TNIKQ9UKE5 1360 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms