RNA–Protein interactions for RNA: ENST00000395338.7

AMT-202, Transcript of aminomethyltransferase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene AMT, Length 1,831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-202ENST00000395338 NISCHQ9Y2I1 1504 aa37.13■■■■□ 3.53
AMT-202ENST00000395338 CCDC180Q9P1Z9 1646 aa33.01■■■□□ 2.87
AMT-202ENST00000395338 ABCC9O60706 1549 aa32.21■■■□□ 2.75
AMT-202ENST00000395338 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
AMT-202ENST00000395338 NACADO15069 1562 aa31.03■■■□□ 2.56
AMT-202ENST00000395338 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
AMT-202ENST00000395338 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
AMT-202ENST00000395338 MYO15BQ96JP2 1530 aa30.86■■■□□ 2.53
AMT-202ENST00000395338 DCAF1Q9Y4B6 1507 aa30.75■■■□□ 2.51
AMT-202ENST00000395338 UNC13AQ9UPW8 1703 aa30.29■■■□□ 2.44
AMT-202ENST00000395338 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
AMT-202ENST00000395338 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.413e-6■■■■□ 23.3
AMT-202ENST00000395338 BICRAQ9NZM4 1560 aa30.05■■■□□ 2.4
AMT-202ENST00000395338 SHROOM4Q9ULL8 1493 aa29.82■■■□□ 2.36
AMT-202ENST00000395338 DNAJC5BQ9UF47 199 aa29.46■■■□□ 2.31
AMT-202ENST00000395338 EIF4G1Q04637 1599 aaKnown RBP29.28■■■□□ 2.28
AMT-202ENST00000395338 CC2D2AQ9P2K1 1620 aa29.15■■■□□ 2.26
AMT-202ENST00000395338 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.22
AMT-202ENST00000395338 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
AMT-202ENST00000395338 BAZ1AQ9NRL2 1556 aaPredicted RBP28.8■■■□□ 2.2
AMT-202ENST00000395338 ATAD2BQ9ULI0 1458 aa28.63■■■□□ 2.17
AMT-202ENST00000395338 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
AMT-202ENST00000395338 NCAPD3P42695 1498 aa28.61■■■□□ 2.17
AMT-202ENST00000395338 MROH2BQ7Z745 1585 aa28.59■■■□□ 2.17
AMT-202ENST00000395338 PEG3Q9GZU2 1588 aa28.53■■■□□ 2.16
AMT-202ENST00000395338 HMGXB3Q12766 1538 aa28.49■■■□□ 2.15
AMT-202ENST00000395338 BAZ1BQ9UIG0 1483 aaKnown RBP28.41■■■□□ 2.14
AMT-202ENST00000395338 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
AMT-202ENST00000395338 WIZO95785 1651 aa28.29■■■□□ 2.12
AMT-202ENST00000395338 TOP2AP11388 1531 aaKnown RBP28.03■■■□□ 2.08
AMT-202ENST00000395338 NESP48681 1621 aa27.87■■■□□ 2.05
AMT-202ENST00000395338 LAMC3Q9Y6N6 1575 aa27.87■■■□□ 2.05
AMT-202ENST00000395338 ERCC6Q03468 1493 aa27.79■■■□□ 2.04
AMT-202ENST00000395338 CADPSQ9ULU8 1353 aa27.79■■■□□ 2.04
AMT-202ENST00000395338 PDS5BQ9NTI5 1447 aa27.69■■■□□ 2.02
AMT-202ENST00000395338 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
AMT-202ENST00000395338 SUPT5HO00267 1087 aaKnown RBP27.63■■■□□ 2.01
AMT-202ENST00000395338 CFTRP13569 1480 aa27.63■■■□□ 2.01
AMT-202ENST00000395338 KIF21AQ7Z4S6 1674 aa27.56■■■□□ 2
AMT-202ENST00000395338 CUX2O14529 1486 aa27.48■■□□□ 1.99
AMT-202ENST00000395338 FANCD2Q9BXW9 1451 aa27.47■■□□□ 1.99
AMT-202ENST00000395338 THOC2Q8NI27 1593 aaKnown RBP27.46■■□□□ 1.99
AMT-202ENST00000395338 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
AMT-202ENST00000395338 PRDM2Q13029 1718 aa27.43■■□□□ 1.98
AMT-202ENST00000395338 MRC2Q9UBG0 1479 aa27.37■■□□□ 1.97
AMT-202ENST00000395338 WDR62O43379 1518 aa27.28■■□□□ 1.96
AMT-202ENST00000395338 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
AMT-202ENST00000395338 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
AMT-202ENST00000395338 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
AMT-202ENST00000395338 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.91
AMT-202ENST00000395338 IFT140Q96RY7 1462 aa26.86■■□□□ 1.89
AMT-202ENST00000395338 CUX1P39880 1505 aa26.83■■□□□ 1.89
AMT-202ENST00000395338 POLA1P09884 1462 aaPredicted RBP26.8■■□□□ 1.88
AMT-202ENST00000395338 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
AMT-202ENST00000395338 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
AMT-202ENST00000395338 WRNQ14191 1432 aaPredicted RBP eCLIP26.7■■□□□ 1.87
AMT-202ENST00000395338 SOGA1O94964 1423 aa26.7■■□□□ 1.86
AMT-202ENST00000395338 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
AMT-202ENST00000395338 RAD54L2Q9Y4B4 1467 aa26.66■■□□□ 1.86
AMT-202ENST00000395338 TOP2BQ02880 1626 aa26.63■■□□□ 1.85
AMT-202ENST00000395338 BIVM-ERCC5R4GMW8 1640 aa26.63■■□□□ 1.85
AMT-202ENST00000395338 EIF4G3O43432 1585 aaKnown RBP26.62■■□□□ 1.85
AMT-202ENST00000395338 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
AMT-202ENST00000395338 WDR97A6NE52 1622 aa26.56■■□□□ 1.84
AMT-202ENST00000395338 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.848e-7■■■■□ 24.7
AMT-202ENST00000395338 DNAJC5Q9H3Z4 198 aa26.53■■□□□ 1.84
AMT-202ENST00000395338 TDRD9Q8NDG6 1382 aaKnown RBP26.52■■□□□ 1.84
AMT-202ENST00000395338 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
AMT-202ENST00000395338 GAPVD1Q14C86 1478 aa26.4■■□□□ 1.82
AMT-202ENST00000395338 GRIN2BQ13224 1484 aa26.39■■□□□ 1.82
AMT-202ENST00000395338 ABCA5Q8WWZ7 1642 aa26.38■■□□□ 1.81
AMT-202ENST00000395338 OSCARQ8IYS5 282 aa26.35■■□□□ 1.81
AMT-202ENST00000395338 SNAPC4Q5SXM2 1469 aa26.33■■□□□ 1.81
AMT-202ENST00000395338 PBRM1Q86U86 1689 aa26.33■■□□□ 1.81
AMT-202ENST00000395338 MAGI1Q96QZ7 1491 aaPredicted RBP26.32■■□□□ 1.8
AMT-202ENST00000395338 CHD1O14646 1710 aa26.25■■□□□ 1.79
AMT-202ENST00000395338 FBLN2P98095 1184 aa26.25■■□□□ 1.79
AMT-202ENST00000395338 SYNJ2O15056 1496 aa26.21■■□□□ 1.79
AMT-202ENST00000395338 CHMP7Q8WUX9 453 aaPredicted RBP26.2■■□□□ 1.78
AMT-202ENST00000395338 ERICH3Q5RHP9 1530 aa26.2■■□□□ 1.78
AMT-202ENST00000395338 KIF27Q86VH2 1401 aa26.16■■□□□ 1.78
AMT-202ENST00000395338 ADAMTS12P58397 1594 aa26.13■■□□□ 1.77
AMT-202ENST00000395338 TRIM41Q8WV44 630 aa26.12■■□□□ 1.77
AMT-202ENST00000395338 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
AMT-202ENST00000395338 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
AMT-202ENST00000395338 IGF1RP08069 1367 aa26.01■■□□□ 1.75
AMT-202ENST00000395338 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
AMT-202ENST00000395338 CUL7Q14999 1698 aa25.98■■□□□ 1.75
AMT-202ENST00000395338 NUP160Q12769 1436 aa25.92■■□□□ 1.74
AMT-202ENST00000395338 ARHGEF11O15085 1522 aa25.9■■□□□ 1.74
AMT-202ENST00000395338 RIMBP3CA6NJZ7 1639 aa25.89■■□□□ 1.74
AMT-202ENST00000395338 RIMBP3BA6NNM3 1639 aa25.89■■□□□ 1.74
AMT-202ENST00000395338 RIMBP3Q9UFD9 1639 aa25.89■■□□□ 1.74
AMT-202ENST00000395338 CEP170Q5SW79 1584 aa25.89■■□□□ 1.74
AMT-202ENST00000395338 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
AMT-202ENST00000395338 CARMIL1Q5VZK9 1371 aa25.87■■□□□ 1.73
AMT-202ENST00000395338 CHIC1Q5VXU3 224 aa25.81■■□□□ 1.72
AMT-202ENST00000395338 RAPGEF2Q9Y4G8 1499 aa25.74■■□□□ 1.71
AMT-202ENST00000395338 SHROOM2Q13796 1616 aa25.71■■□□□ 1.71
AMT-202ENST00000395338 EEA1Q15075 1411 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms