RNA–Protein interactions for RNA: ENST00000637821.1

AMT-252, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-252ENST00000637821 NISCHQ9Y2I1 1504 aa38.44■■■■□ 3.74
AMT-252ENST00000637821 CCDC180Q9P1Z9 1646 aa33.08■■■□□ 2.89
AMT-252ENST00000637821 ZCCHC6Q5VYS8 1495 aaKnown RBP32.39■■■□□ 2.78
AMT-252ENST00000637821 SHROOM4Q9ULL8 1493 aa31.95■■■□□ 2.71
AMT-252ENST00000637821 DCAF8L2P0C7V8 631 aa31.8■■■□□ 2.68
AMT-252ENST00000637821 DCAF1Q9Y4B6 1507 aa31.7■■■□□ 2.66
AMT-252ENST00000637821 MYO15BQ96JP2 1530 aa31.1■■■□□ 2.57
AMT-252ENST00000637821 ABCC9O60706 1549 aa31.05■■■□□ 2.56
AMT-252ENST00000637821 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
AMT-252ENST00000637821 NACADO15069 1562 aa30.78■■■□□ 2.52
AMT-252ENST00000637821 SCRIBQ14160 1630 aa30.68■■■□□ 2.5
AMT-252ENST00000637821 RB1CC1Q8TDY2 1594 aa30.38■■■□□ 2.45
AMT-252ENST00000637821 RSF1Q96T23 1441 aaPredicted RBP30.11■■■□□ 2.41
AMT-252ENST00000637821 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.38
AMT-252ENST00000637821 CECR2Q9BXF3 1484 aa29.92■■■□□ 2.38
AMT-252ENST00000637821 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
AMT-252ENST00000637821 UNC13AQ9UPW8 1703 aa29.71■■■□□ 2.35
AMT-252ENST00000637821 BAZ1AQ9NRL2 1556 aaPredicted RBP29.6■■■□□ 2.33
AMT-252ENST00000637821 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
AMT-252ENST00000637821 WIZO95785 1651 aa29.51■■■□□ 2.32
AMT-252ENST00000637821 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.313e-6■■■■□ 23.3
AMT-252ENST00000637821 SMARCA4P51532 1647 aa29.39■■■□□ 2.3
AMT-252ENST00000637821 TOP2AP11388 1531 aaKnown RBP29.18■■■□□ 2.26
AMT-252ENST00000637821 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
AMT-252ENST00000637821 CCDC88BA6NC98 1476 aa28.99■■■□□ 2.23
AMT-252ENST00000637821 PEG3Q9GZU2 1588 aa28.97■■■□□ 2.23
AMT-252ENST00000637821 SMARCA2P51531 1590 aa28.95■■■□□ 2.22
AMT-252ENST00000637821 EIF4G1Q04637 1599 aaKnown RBP28.91■■■□□ 2.22
AMT-252ENST00000637821 LOC105371045A0A1W2PR82 267 aa28.9■■■□□ 2.22
AMT-252ENST00000637821 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
AMT-252ENST00000637821 BAZ1BQ9UIG0 1483 aaKnown RBP28.69■■■□□ 2.18
AMT-252ENST00000637821 FAM9AQ8IZU1 332 aaPredicted RBP28.64■■■□□ 2.18
AMT-252ENST00000637821 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
AMT-252ENST00000637821 NCAPD3P42695 1498 aa28.48■■■□□ 2.15
AMT-252ENST00000637821 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
AMT-252ENST00000637821 WRNQ14191 1432 aaPredicted RBP eCLIP28.3■■■□□ 2.12
AMT-252ENST00000637821 EHMT2Q96KQ7 1210 aa28.28■■■□□ 2.12
AMT-252ENST00000637821 SOGA1O94964 1423 aa28.2■■■□□ 2.11
AMT-252ENST00000637821 PCGF6Q9BYE7 350 aa28.14■■■□□ 2.1
AMT-252ENST00000637821 SYNJ1O43426 1573 aa28.13■■■□□ 2.09
AMT-252ENST00000637821 EEA1Q15075 1411 aa28.12■■■□□ 2.09
AMT-252ENST00000637821 RUSC2Q8N2Y8 1516 aa28.06■■■□□ 2.08
AMT-252ENST00000637821 CSRNP3Q8WYN3 585 aa28.04■■■□□ 2.08
AMT-252ENST00000637821 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
AMT-252ENST00000637821 CFTRP13569 1480 aa28.01■■■□□ 2.07
AMT-252ENST00000637821 TRIM26Q12899 539 aaPredicted RBP27.93■■■□□ 2.06
AMT-252ENST00000637821 TOP2BQ02880 1626 aa27.92■■■□□ 2.06
AMT-252ENST00000637821 TNIKQ9UKE5 1360 aa27.85■■■□□ 2.05
AMT-252ENST00000637821 CADPSQ9ULU8 1353 aa27.84■■■□□ 2.05
AMT-252ENST00000637821 BIVM-ERCC5R4GMW8 1640 aa27.83■■■□□ 2.05
AMT-252ENST00000637821 GOLGA3Q08378 1498 aa27.8■■■□□ 2.04
AMT-252ENST00000637821 CUX1P39880 1505 aa27.78■■■□□ 2.04
AMT-252ENST00000637821 UBTFP17480 764 aaKnown RBP27.77■■■□□ 2.04
AMT-252ENST00000637821 CEP162Q5TB80 1403 aa27.76■■■□□ 2.03
AMT-252ENST00000637821 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
AMT-252ENST00000637821 HRCP23327 699 aa27.74■■■□□ 2.03
AMT-252ENST00000637821 KIF21BO75037 1637 aa27.69■■■□□ 2.02
AMT-252ENST00000637821 PRDM2Q13029 1718 aa27.65■■■□□ 2.02
AMT-252ENST00000637821 RAPGEF2Q9Y4G8 1499 aa27.57■■■□□ 2
AMT-252ENST00000637821 PPARGC1BQ86YN6 1023 aaKnown RBP27.53■■■□□ 2
AMT-252ENST00000637821 KIF27Q86VH2 1401 aa27.53■■■□□ 2
AMT-252ENST00000637821 FANCD2Q9BXW9 1451 aa27.51■■□□□ 1.99
AMT-252ENST00000637821 PRXQ9BXM0 1461 aa27.48■■□□□ 1.99
AMT-252ENST00000637821 NESP48681 1621 aa27.44■■□□□ 1.98
AMT-252ENST00000637821 ERICH3Q5RHP9 1530 aa27.42■■□□□ 1.98
AMT-252ENST00000637821 CLIP1P30622 1438 aa27.41■■□□□ 1.98
AMT-252ENST00000637821 FGD5Q6ZNL6 1462 aa27.39■■□□□ 1.98
AMT-252ENST00000637821 DNAJC5BQ9UF47 199 aa27.39■■□□□ 1.98
AMT-252ENST00000637821 CUX2O14529 1486 aa27.35■■□□□ 1.97
AMT-252ENST00000637821 LAMC3Q9Y6N6 1575 aa27.34■■□□□ 1.97
AMT-252ENST00000637821 DNMBPQ6XZF7 1577 aa27.29■■□□□ 1.96
AMT-252ENST00000637821 IGF1RP08069 1367 aa27.28■■□□□ 1.96
AMT-252ENST00000637821 TOPBP1Q92547 1522 aa27.26■■□□□ 1.95
AMT-252ENST00000637821 RANGAP1P46060 587 aaPredicted RBP27.24■■□□□ 1.95
AMT-252ENST00000637821 VPS8Q8N3P4 1428 aa27.23■■□□□ 1.95
AMT-252ENST00000637821 PDS5BQ9NTI5 1447 aa27.2■■□□□ 1.94
AMT-252ENST00000637821 TTBK1Q5TCY1 1321 aaPredicted RBP27.2■■□□□ 1.94
AMT-252ENST00000637821 POLA1P09884 1462 aaPredicted RBP27.19■■□□□ 1.94
AMT-252ENST00000637821 RAD54L2Q9Y4B4 1467 aa27.16■■□□□ 1.94
AMT-252ENST00000637821 URB2Q14146 1524 aaKnown RBP27.14■■□□□ 1.94
AMT-252ENST00000637821 CARMIL1Q5VZK9 1371 aa27.14■■□□□ 1.93
AMT-252ENST00000637821 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.93
AMT-252ENST00000637821 ARAP1Q96P48 1450 aa27.07■■□□□ 1.92
AMT-252ENST00000637821 ZEB1P37275 1124 aaPredicted RBP27.04■■□□□ 1.92
AMT-252ENST00000637821 APLP2Q06481 763 aa27.02■■□□□ 1.92
AMT-252ENST00000637821 ARHGAP35Q9NRY4 1499 aa26.96■■□□□ 1.91
AMT-252ENST00000637821 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.91
AMT-252ENST00000637821 WDR97A6NE52 1622 aa26.88■■□□□ 1.89
AMT-252ENST00000637821 TDRD9Q8NDG6 1382 aaKnown RBP26.88■■□□□ 1.89
AMT-252ENST00000637821 CUL7Q14999 1698 aa26.83■■□□□ 1.89
AMT-252ENST00000637821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.83■■□□□ 1.89
AMT-252ENST00000637821 GAPVD1Q14C86 1478 aa26.82■■□□□ 1.88
AMT-252ENST00000637821 ABCA5Q8WWZ7 1642 aa26.82■■□□□ 1.88
AMT-252ENST00000637821 MRC2Q9UBG0 1479 aa26.79■■□□□ 1.88
AMT-252ENST00000637821 CCER1Q8TC90 406 aaPredicted RBP26.76■■□□□ 1.87
AMT-252ENST00000637821 KANK4Q5T7N3 995 aaPredicted RBP26.75■■□□□ 1.87
AMT-252ENST00000637821 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
AMT-252ENST00000637821 HNRNPUL2Q1KMD3 747 aaKnown RBP26.65■■□□□ 1.86
AMT-252ENST00000637821 P3H3Q8IVL6 736 aa26.63■■□□□ 1.85
AMT-252ENST00000637821 FHAD1B1AJZ9 1412 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms