RNA–Protein interactions for RNA: ENST00000636803.1

AMT-238, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 1,945 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-238ENST00000636803 NISCHQ9Y2I1 1504 aa37.46■■■■□ 3.59
AMT-238ENST00000636803 CCDC180Q9P1Z9 1646 aa32.29■■■□□ 2.76
AMT-238ENST00000636803 ZCCHC6Q5VYS8 1495 aaKnown RBP31.6■■■□□ 2.65
AMT-238ENST00000636803 SHROOM4Q9ULL8 1493 aa31.13■■■□□ 2.57
AMT-238ENST00000636803 DCAF1Q9Y4B6 1507 aa30.95■■■□□ 2.55
AMT-238ENST00000636803 DCAF8L2P0C7V8 631 aa30.75■■■□□ 2.51
AMT-238ENST00000636803 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.44
AMT-238ENST00000636803 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
AMT-238ENST00000636803 ABCC9O60706 1549 aa29.92■■■□□ 2.38
AMT-238ENST00000636803 NACADO15069 1562 aa29.91■■■□□ 2.38
AMT-238ENST00000636803 SCRIBQ14160 1630 aa29.84■■■□□ 2.37
AMT-238ENST00000636803 RB1CC1Q8TDY2 1594 aa29.48■■■□□ 2.31
AMT-238ENST00000636803 CHIC1Q5VXU3 224 aa29.41■■■□□ 2.3
AMT-238ENST00000636803 RSF1Q96T23 1441 aaPredicted RBP29.36■■■□□ 2.29
AMT-238ENST00000636803 CECR2Q9BXF3 1484 aa29.07■■■□□ 2.24
AMT-238ENST00000636803 MROH2BQ7Z745 1585 aa28.99■■■□□ 2.23
AMT-238ENST00000636803 UNC13AQ9UPW8 1703 aa28.95■■■□□ 2.22
AMT-238ENST00000636803 BAZ1AQ9NRL2 1556 aaPredicted RBP28.85■■■□□ 2.21
AMT-238ENST00000636803 WIZO95785 1651 aa28.79■■■□□ 2.2
AMT-238ENST00000636803 SMARCA4P51532 1647 aa28.64■■■□□ 2.18
AMT-238ENST00000636803 BICRAQ9NZM4 1560 aa28.61■■■□□ 2.17
AMT-238ENST00000636803 TOP2AP11388 1531 aaKnown RBP28.49■■■□□ 2.15
AMT-238ENST00000636803 TRIM41Q8WV44 630 aa28.44■■■□□ 2.14
AMT-238ENST00000636803 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.133e-6■■■■□ 23.3
AMT-238ENST00000636803 LOC105371045A0A1W2PR82 267 aa28.33■■■□□ 2.13
AMT-238ENST00000636803 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.13
AMT-238ENST00000636803 SMARCA2P51531 1590 aa28.26■■■□□ 2.11
AMT-238ENST00000636803 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
AMT-238ENST00000636803 CCDC88BA6NC98 1476 aa28.24■■■□□ 2.11
AMT-238ENST00000636803 ATAD2BQ9ULI0 1458 aa27.99■■■□□ 2.07
AMT-238ENST00000636803 FAM9AQ8IZU1 332 aaPredicted RBP27.96■■■□□ 2.07
AMT-238ENST00000636803 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
AMT-238ENST00000636803 BAZ1BQ9UIG0 1483 aaKnown RBP27.87■■■□□ 2.05
AMT-238ENST00000636803 PCGF6Q9BYE7 350 aa27.82■■■□□ 2.04
AMT-238ENST00000636803 HRCP23327 699 aa27.63■■■□□ 2.01
AMT-238ENST00000636803 HMGXB3Q12766 1538 aa27.62■■■□□ 2.01
AMT-238ENST00000636803 TRIM26Q12899 539 aaPredicted RBP27.62■■■□□ 2.01
AMT-238ENST00000636803 NCAPD3P42695 1498 aa27.61■■■□□ 2.01
AMT-238ENST00000636803 WRNQ14191 1432 aaPredicted RBP eCLIP27.6■■■□□ 2.01
AMT-238ENST00000636803 EEA1Q15075 1411 aa27.59■■■□□ 2.01
AMT-238ENST00000636803 EHMT2Q96KQ7 1210 aa27.55■■■□□ 2
AMT-238ENST00000636803 SOGA1O94964 1423 aa27.52■■■□□ 2
AMT-238ENST00000636803 SYNJ1O43426 1573 aa27.47■■□□□ 1.99
AMT-238ENST00000636803 CSRNP3Q8WYN3 585 aa27.4■■□□□ 1.98
AMT-238ENST00000636803 RUSC2Q8N2Y8 1516 aa27.38■■□□□ 1.97
AMT-238ENST00000636803 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
AMT-238ENST00000636803 TOP2BQ02880 1626 aa27.29■■□□□ 1.96
AMT-238ENST00000636803 GOLGA3Q08378 1498 aa27.25■■□□□ 1.95
AMT-238ENST00000636803 BIVM-ERCC5R4GMW8 1640 aa27.25■■□□□ 1.95
AMT-238ENST00000636803 CEP162Q5TB80 1403 aa27.23■■□□□ 1.95
AMT-238ENST00000636803 CFTRP13569 1480 aa27.21■■□□□ 1.95
AMT-238ENST00000636803 KIF21BO75037 1637 aa27.21■■□□□ 1.95
AMT-238ENST00000636803 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
AMT-238ENST00000636803 UBTFP17480 764 aaKnown RBP27.12■■□□□ 1.93
AMT-238ENST00000636803 PRDM2Q13029 1718 aa27.11■■□□□ 1.93
AMT-238ENST00000636803 CC2D2AQ9P2K1 1620 aa27.09■■□□□ 1.93
AMT-238ENST00000636803 CUX1P39880 1505 aa27.05■■□□□ 1.92
AMT-238ENST00000636803 CADPSQ9ULU8 1353 aa26.97■■□□□ 1.91
AMT-238ENST00000636803 PPARGC1BQ86YN6 1023 aaKnown RBP26.94■■□□□ 1.9
AMT-238ENST00000636803 RAPGEF2Q9Y4G8 1499 aa26.91■■□□□ 1.9
AMT-238ENST00000636803 ZEB1P37275 1124 aaPredicted RBP26.91■■□□□ 1.9
AMT-238ENST00000636803 ERICH3Q5RHP9 1530 aa26.87■■□□□ 1.89
AMT-238ENST00000636803 PRXQ9BXM0 1461 aa26.85■■□□□ 1.89
AMT-238ENST00000636803 CLIP1P30622 1438 aa26.85■■□□□ 1.89
AMT-238ENST00000636803 KIF27Q86VH2 1401 aa26.84■■□□□ 1.89
AMT-238ENST00000636803 VPS8Q8N3P4 1428 aa26.72■■□□□ 1.87
AMT-238ENST00000636803 FANCD2Q9BXW9 1451 aa26.67■■□□□ 1.86
AMT-238ENST00000636803 FGD5Q6ZNL6 1462 aa26.63■■□□□ 1.85
AMT-238ENST00000636803 CUX2O14529 1486 aa26.61■■□□□ 1.85
AMT-238ENST00000636803 TTBK1Q5TCY1 1321 aaPredicted RBP26.57■■□□□ 1.84
AMT-238ENST00000636803 DNMBPQ6XZF7 1577 aa26.56■■□□□ 1.84
AMT-238ENST00000636803 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
AMT-238ENST00000636803 IGF1RP08069 1367 aa26.54■■□□□ 1.84
AMT-238ENST00000636803 NESP48681 1621 aa26.51■■□□□ 1.83
AMT-238ENST00000636803 ARAP1Q96P48 1450 aa26.5■■□□□ 1.83
AMT-238ENST00000636803 APLP2Q06481 763 aa26.48■■□□□ 1.83
AMT-238ENST00000636803 TOPBP1Q92547 1522 aa26.47■■□□□ 1.83
AMT-238ENST00000636803 RANGAP1P46060 587 aaPredicted RBP26.47■■□□□ 1.83
AMT-238ENST00000636803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.42■■□□□ 1.82
AMT-238ENST00000636803 CARMIL1Q5VZK9 1371 aa26.42■■□□□ 1.82
AMT-238ENST00000636803 ABCA10Q8WWZ4 1543 aa26.41■■□□□ 1.82
AMT-238ENST00000636803 CCER1Q8TC90 406 aaPredicted RBP26.41■■□□□ 1.82
AMT-238ENST00000636803 POLA1P09884 1462 aaPredicted RBP26.39■■□□□ 1.82
AMT-238ENST00000636803 ARHGAP35Q9NRY4 1499 aa26.35■■□□□ 1.81
AMT-238ENST00000636803 RAD54L2Q9Y4B4 1467 aa26.34■■□□□ 1.81
AMT-238ENST00000636803 PDS5BQ9NTI5 1447 aa26.32■■□□□ 1.8
AMT-238ENST00000636803 URB2Q14146 1524 aaKnown RBP26.31■■□□□ 1.8
AMT-238ENST00000636803 WDR97A6NE52 1622 aa26.25■■□□□ 1.79
AMT-238ENST00000636803 CUL7Q14999 1698 aa26.25■■□□□ 1.79
AMT-238ENST00000636803 DNAJC5BQ9UF47 199 aa26.21■■□□□ 1.79
AMT-238ENST00000636803 KIF21AQ7Z4S6 1674 aa26.18■■□□□ 1.78
AMT-238ENST00000636803 ABCA5Q8WWZ7 1642 aa26.13■■□□□ 1.77
AMT-238ENST00000636803 HNRNPUL2Q1KMD3 747 aaKnown RBP26.13■■□□□ 1.77
AMT-238ENST00000636803 KANK4Q5T7N3 995 aaPredicted RBP26.13■■□□□ 1.77
AMT-238ENST00000636803 MAP3K1Q13233 1512 aa26.12■■□□□ 1.77
AMT-238ENST00000636803 CTTNBP2Q8WZ74 1663 aa26.07■■□□□ 1.76
AMT-238ENST00000636803 EFCAB5A4FU69 1503 aa26.05■■□□□ 1.76
AMT-238ENST00000636803 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
AMT-238ENST00000636803 RRBP1Q9P2E9 1410 aaKnown RBP26.05■■□□□ 1.76
AMT-238ENST00000636803 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms