RNA–Protein interactions for RNA: ENST00000476226.6

AMT-212, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-212ENST00000476226 NISCHQ9Y2I1 1504 aa28.66■■■□□ 2.18
AMT-212ENST00000476226 HRCP23327 699 aa25.89■■□□□ 1.73
AMT-212ENST00000476226 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
AMT-212ENST00000476226 PELP1Q8IZL8 1130 aaKnown RBP25.34■■□□□ 1.65
AMT-212ENST00000476226 PPARGC1BQ86YN6 1023 aaKnown RBP25.17■■□□□ 1.62
AMT-212ENST00000476226 MYO15BQ96JP2 1530 aa25.1■■□□□ 1.61
AMT-212ENST00000476226 PCGF6Q9BYE7 350 aa25.09■■□□□ 1.61
AMT-212ENST00000476226 SHROOM4Q9ULL8 1493 aa24.97■■□□□ 1.59
AMT-212ENST00000476226 SUPT5HO00267 1087 aaKnown RBP24.93■■□□□ 1.58
AMT-212ENST00000476226 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
AMT-212ENST00000476226 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
AMT-212ENST00000476226 ABCC9O60706 1549 aa24.68■■□□□ 1.54
AMT-212ENST00000476226 SCAF1Q9H7N4 1312 aaKnown RBP24.55■■□□□ 1.52
AMT-212ENST00000476226 MYT1Q01538 1121 aa24.45■■□□□ 1.5
AMT-212ENST00000476226 TRIM26Q12899 539 aaPredicted RBP24.37■■□□□ 1.49
AMT-212ENST00000476226 ZEB1P37275 1124 aaPredicted RBP24.3■■□□□ 1.48
AMT-212ENST00000476226 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
AMT-212ENST00000476226 LOC105371045A0A1W2PR82 267 aa24.1■■□□□ 1.45
AMT-212ENST00000476226 NACADO15069 1562 aa24.05■■□□□ 1.44
AMT-212ENST00000476226 RB1CC1Q8TDY2 1594 aa24.02■■□□□ 1.44
AMT-212ENST00000476226 ACIN1Q9UKV3 1341 aaKnown RBP23.91■■□□□ 1.42
AMT-212ENST00000476226 NEUROD1Q13562 356 aa23.78■■□□□ 1.4
AMT-212ENST00000476226 GTF3C3Q9Y5Q9 886 aa23.65■■□□□ 1.38
AMT-212ENST00000476226 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
AMT-212ENST00000476226 CENPBP07199 599 aaPredicted RBP23.55■■□□□ 1.36
AMT-212ENST00000476226 UNC13AQ9UPW8 1703 aa23.34■■□□□ 1.33
AMT-212ENST00000476226 DIEXFQ68CQ4 756 aaKnown RBP23.33■■□□□ 1.33
AMT-212ENST00000476226 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
AMT-212ENST00000476226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.18■■□□□ 1.3
AMT-212ENST00000476226 CCER1Q8TC90 406 aaPredicted RBP23.16■■□□□ 1.3
AMT-212ENST00000476226 TRIM41Q8WV44 630 aa23.12■■□□□ 1.29
AMT-212ENST00000476226 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
AMT-212ENST00000476226 TTBK1Q5TCY1 1321 aaPredicted RBP23.03■■□□□ 1.28
AMT-212ENST00000476226 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
AMT-212ENST00000476226 PABPN1Q86U42 306 aaKnown RBP eCLIP22.97■■□□□ 1.273e-6■■■■□ 23.3
AMT-212ENST00000476226 ZNF316A6NFI3 1004 aaPredicted RBP22.89■■□□□ 1.25
AMT-212ENST00000476226 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
AMT-212ENST00000476226 YTHDC1Q96MU7 727 aaKnown RBP22.84■■□□□ 1.25
AMT-212ENST00000476226 EHMT2Q96KQ7 1210 aa22.78■■□□□ 1.24
AMT-212ENST00000476226 BCL11AQ9H165 835 aa22.72■■□□□ 1.23
AMT-212ENST00000476226 MIER1Q8N108 512 aa22.71■■□□□ 1.23
AMT-212ENST00000476226 WRNQ14191 1432 aaPredicted RBP eCLIP22.66■■□□□ 1.22
AMT-212ENST00000476226 ANP32EQ9BTT0 268 aa22.66■■□□□ 1.22
AMT-212ENST00000476226 CLSPNQ9HAW4 1339 aa22.64■■□□□ 1.21
AMT-212ENST00000476226 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
AMT-212ENST00000476226 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
AMT-212ENST00000476226 SUPT16HQ9Y5B9 1047 aaKnown RBP22.53■■□□□ 1.2
AMT-212ENST00000476226 TSHZ2Q9NRE2 1034 aa22.49■■□□□ 1.19
AMT-212ENST00000476226 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
AMT-212ENST00000476226 CEP162Q5TB80 1403 aa22.36■■□□□ 1.17
AMT-212ENST00000476226 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
AMT-212ENST00000476226 CECR2Q9BXF3 1484 aa22.28■■□□□ 1.16
AMT-212ENST00000476226 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
AMT-212ENST00000476226 TNIKQ9UKE5 1360 aa22.24■■□□□ 1.15
AMT-212ENST00000476226 SMARCA4P51532 1647 aa22.21■■□□□ 1.15
AMT-212ENST00000476226 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
AMT-212ENST00000476226 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
AMT-212ENST00000476226 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
AMT-212ENST00000476226 PEG3Q9GZU2 1588 aa22.14■■□□□ 1.14
AMT-212ENST00000476226 WIZO95785 1651 aa22.12■■□□□ 1.13
AMT-212ENST00000476226 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.13
AMT-212ENST00000476226 HMGXB3Q12766 1538 aa22.08■■□□□ 1.12
AMT-212ENST00000476226 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
AMT-212ENST00000476226 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
AMT-212ENST00000476226 HNRNPUL2Q1KMD3 747 aaKnown RBP22.04■■□□□ 1.12
AMT-212ENST00000476226 EEA1Q15075 1411 aa21.99■■□□□ 1.11
AMT-212ENST00000476226 SOGA1O94964 1423 aa21.98■■□□□ 1.11
AMT-212ENST00000476226 GOLGA3Q08378 1498 aa21.93■■□□□ 1.1
AMT-212ENST00000476226 PRKCSHP14314 528 aaPredicted RBP21.91■■□□□ 1.1
AMT-212ENST00000476226 RBM19Q9Y4C8 960 aaKnown RBP21.91■■□□□ 1.1
AMT-212ENST00000476226 BAZ1BQ9UIG0 1483 aaKnown RBP21.88■■□□□ 1.09
AMT-212ENST00000476226 UBTFP17480 764 aaKnown RBP21.86■■□□□ 1.09
AMT-212ENST00000476226 BCANQ96GW7 911 aa21.84■■□□□ 1.09
AMT-212ENST00000476226 DHX57Q6P158 1386 aaKnown RBP21.84■■□□□ 1.09
AMT-212ENST00000476226 RUSC2Q8N2Y8 1516 aa21.84■■□□□ 1.09
AMT-212ENST00000476226 FKBP8Q14318 412 aa21.81■■□□□ 1.08
AMT-212ENST00000476226 VPS8Q8N3P4 1428 aa21.77■■□□□ 1.08
AMT-212ENST00000476226 MSH5O43196 834 aa21.76■■□□□ 1.07
AMT-212ENST00000476226 TOP2AP11388 1531 aaKnown RBP21.74■■□□□ 1.07
AMT-212ENST00000476226 KCNH8Q96L42 1107 aa21.74■■□□□ 1.07
AMT-212ENST00000476226 CLIP1P30622 1438 aa21.74■■□□□ 1.07
AMT-212ENST00000476226 KIF21BO75037 1637 aa21.72■■□□□ 1.07
AMT-212ENST00000476226 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
AMT-212ENST00000476226 FANCIQ9NVI1 1328 aa21.64■■□□□ 1.06
AMT-212ENST00000476226 NEFLP07196 543 aa21.62■■□□□ 1.05
AMT-212ENST00000476226 APLP2Q06481 763 aa21.58■■□□□ 1.05
AMT-212ENST00000476226 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.04
AMT-212ENST00000476226 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
AMT-212ENST00000476226 CUX2O14529 1486 aa21.55■■□□□ 1.04
AMT-212ENST00000476226 ITGAEP38570 1179 aa21.54■■□□□ 1.04
AMT-212ENST00000476226 ERICH6Q7L0X2 663 aa21.51■■□□□ 1.03
AMT-212ENST00000476226 RRBP1Q9P2E9 1410 aaKnown RBP21.44■■□□□ 1.02
AMT-212ENST00000476226 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
AMT-212ENST00000476226 DEKP35659 375 aaKnown RBP21.41■■□□□ 1.02
AMT-212ENST00000476226 PDS5BQ9NTI5 1447 aa21.4■■□□□ 1.02
AMT-212ENST00000476226 CCER2I3L3R5 266 aa21.4■■□□□ 1.02
AMT-212ENST00000476226 RAPGEF2Q9Y4G8 1499 aa21.39■■□□□ 1.01
AMT-212ENST00000476226 MAPKBP1O60336 1514 aa21.38■■□□□ 1.01
AMT-212ENST00000476226 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
AMT-212ENST00000476226 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms