Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.038e-9■■■□□ 16.3
DDX59Q5T1V6 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.148e-9■■■□□ 16.3
DDX59Q5T1V6 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.487e-8■■■□□ 16.3
DDX59Q5T1V6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.337e-8■■■□□ 16.3
DDX59Q5T1V6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.227e-8■■■□□ 16.3
DDX59Q5T1V6 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC12.14□□□□□ -0.477e-8■■■□□ 16.3
DDX59Q5T1V6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.262e-6■■■□□ 16.3
DDX59Q5T1V6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.56■□□□□ 0.727e-9■■■□□ 16.3
DDX59Q5T1V6 AGAP3-220ENST00000486946 431 ntTSL 310.26□□□□□ -0.772e-6■■■□□ 16.2
DDX59Q5T1V6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.074e-7■■■□□ 16.2
DDX59Q5T1V6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.07■□□□□ 04e-7■■■□□ 16.2
DDX59Q5T1V6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.58□□□□□ -0.244e-7■■■□□ 16.2
DDX59Q5T1V6 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.264e-7■■■□□ 16.2
DDX59Q5T1V6 SATB2-207ENST00000463386 372 ntTSL 49.78□□□□□ -0.844e-7■■■□□ 16.2
DDX59Q5T1V6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.58e-7■■■□□ 16.2
DDX59Q5T1V6 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC12.42□□□□□ -0.428e-7■■■□□ 16.2
DDX59Q5T1V6 IQSEC1-205ENST00000618604 3744 ntTSL 1 (best) BASIC11.22□□□□□ -0.618e-7■■■□□ 16.2
DDX59Q5T1V6 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.436e-7■■■□□ 16.2
DDX59Q5T1V6 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.496e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.73■■□□□ 1.396e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.23■■□□□ 1.316e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.53■■□□□ 1.046e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.76e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-217ENST00000566809 560 ntTSL 418.62■□□□□ 0.576e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-218ENST00000567087 550 ntTSL 416.67■□□□□ 0.266e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.186e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-223ENST00000569050 457 ntTSL 414.68□□□□□ -0.066e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-222ENST00000568883 1863 ntTSL 5 BASIC12.19□□□□□ -0.466e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.526e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-224ENST00000569857 1355 ntTSL 511.38□□□□□ -0.596e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-219ENST00000567118 2254 ntTSL 210.64□□□□□ -0.716e-7■■■□□ 16.2
DDX59Q5T1V6 PKM-211ENST00000564276 753 ntTSL 1 (best)8.81□□□□□ -16e-7■■■□□ 16.2
DDX59Q5T1V6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.445e-7■■■□□ 16.1
DDX59Q5T1V6 FBXO17-205ENST00000599418 2222 ntTSL 216.04■□□□□ 0.165e-7■■■□□ 16.1
DDX59Q5T1V6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.15e-7■■■□□ 16.1
DDX59Q5T1V6 FBXO17-207ENST00000601394 2366 ntTSL 514.25□□□□□ -0.135e-7■■■□□ 16.1
DDX59Q5T1V6 FBXO17-206ENST00000599598 510 ntTSL 512.78□□□□□ -0.365e-7■■■□□ 16.1
DDX59Q5T1V6 FBXO17-204ENST00000597696 932 ntTSL 212.52□□□□□ -0.415e-7■■■□□ 16.1
DDX59Q5T1V6 SEPT9-247ENST00000593189 817 ntTSL 510.3□□□□□ -0.761e-6■■■□□ 16.1
DDX59Q5T1V6 ASB16-AS1-204ENST00000592897 551 ntTSL 417.19■□□□□ 0.342e-8■■■□□ 16.1
DDX59Q5T1V6 SEPT9-219ENST00000588575 559 ntTSL 418.42■□□□□ 0.545e-7■■■□□ 16.1
DDX59Q5T1V6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.095e-7■■■□□ 16.1
DDX59Q5T1V6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.14□□□□□ -0.155e-7■■■□□ 16.1
DDX59Q5T1V6 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.485e-7■■■□□ 16.1
DDX59Q5T1V6 SLC12A4-212ENST00000573023 3649 ntTSL 518.24■□□□□ 0.514e-7■■■□□ 16
DDX59Q5T1V6 SLC12A4-218ENST00000576513 412 ntTSL 512.6□□□□□ -0.394e-7■■■□□ 16
DDX59Q5T1V6 SLC12A4-203ENST00000537830 3525 ntTSL 2 BASIC11.44□□□□□ -0.584e-7■■■□□ 16
DDX59Q5T1V6 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC11.31□□□□□ -0.64e-7■■■□□ 16
DDX59Q5T1V6 SLC12A4-204ENST00000541864 3627 ntTSL 2 BASIC11.19□□□□□ -0.624e-7■■■□□ 16
DDX59Q5T1V6 SLC12A4-219ENST00000576616 3768 ntTSL 2 BASIC10.85□□□□□ -0.674e-7■■■□□ 16
DDX59Q5T1V6 SLC12A4-206ENST00000570802 3761 ntTSL 210.5□□□□□ -0.734e-7■■■□□ 16
DDX59Q5T1V6 RAD54L-204ENST00000463715 718 ntTSL 514.73□□□□□ -0.055e-10■■■□□ 16
DDX59Q5T1V6 RAD54L-212ENST00000493985 810 ntTSL 414.2□□□□□ -0.145e-10■■■□□ 16
DDX59Q5T1V6 RAD54L-202ENST00000442598 2549 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.825e-10■■■□□ 16
DDX59Q5T1V6 RAD54L-205ENST00000469835 648 ntTSL 39.16□□□□□ -0.945e-10■■■□□ 16
DDX59Q5T1V6 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.035e-10■■■□□ 16
DDX59Q5T1V6 SEPT9-235ENST00000591020 582 ntTSL 410.15□□□□□ -0.786e-7■■■□□ 15.9
DDX59Q5T1V6 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC11.69□□□□□ -0.541e-8■■■□□ 15.9
DDX59Q5T1V6 TRAF4-211ENST00000478021 718 ntTSL 320.56■□□□□ 0.883e-8■■■□□ 15.9
DDX59Q5T1V6 GPATCH8-211ENST00000635257 5602 ntTSL 511.45□□□□□ -0.581e-19■■■□□ 15.9
DDX59Q5T1V6 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.781e-19■■■□□ 15.9
DDX59Q5T1V6 GPATCH8-205ENST00000587228 4713 ntTSL 1 (best)9.44□□□□□ -0.91e-19■■■□□ 15.9
DDX59Q5T1V6 GPATCH8-201ENST00000335500 8109 ntTSL 28.71□□□□□ -1.021e-19■■■□□ 15.9
DDX59Q5T1V6 GLI4-208ENST00000522033 615 ntTSL 220.73■□□□□ 0.913e-7■■■□□ 15.9
DDX59Q5T1V6 GLI4-209ENST00000522479 435 ntTSL 319.82■□□□□ 0.763e-7■■■□□ 15.9
DDX59Q5T1V6 GLI4-204ENST00000517530 563 ntTSL 219.56■□□□□ 0.723e-7■■■□□ 15.9
DDX59Q5T1V6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.713e-7■■■□□ 15.9
DDX59Q5T1V6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.693e-7■■■□□ 15.9
DDX59Q5T1V6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.643e-7■■■□□ 15.9
DDX59Q5T1V6 GLI4-211ENST00000523812 2333 nt18.84■□□□□ 0.613e-7■■■□□ 15.9
DDX59Q5T1V6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.242e-7■■■□□ 15.9
DDX59Q5T1V6 ASPSCR1-203ENST00000344865 1041 ntTSL 219.92■□□□□ 0.781e-10■■■□□ 15.8
DDX59Q5T1V6 C2orf82-208ENST00000481155 660 ntTSL 319.77■□□□□ 0.761e-10■■■□□ 15.8
DDX59Q5T1V6 C2orf82-206ENST00000467665 2782 ntTSL 1 (best)19.51■□□□□ 0.711e-10■■■□□ 15.8
DDX59Q5T1V6 ASPSCR1-209ENST00000581484 1001 ntTSL 215.32■□□□□ 0.041e-10■■■□□ 15.8
DDX59Q5T1V6 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.421e-10■■■□□ 15.8
DDX59Q5T1V6 FANCA-226ENST00000567879 713 ntAPPRIS ALT2 TSL 312.31□□□□□ -0.441e-10■■■□□ 15.8
DDX59Q5T1V6 FANCA-208ENST00000561722 696 ntTSL 311.34□□□□□ -0.591e-10■■■□□ 15.8
DDX59Q5T1V6 FANCA-231ENST00000568626 727 ntTSL 311.08□□□□□ -0.641e-10■■■□□ 15.8
DDX59Q5T1V6 FANCA-215ENST00000564475 732 ntAPPRIS ALT2 TSL 210.86□□□□□ -0.671e-10■■■□□ 15.8
DDX59Q5T1V6 FANCA-217ENST00000564969 850 ntTSL 310.54□□□□□ -0.721e-10■■■□□ 15.8
DDX59Q5T1V6 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.751e-10■■■□□ 15.8
DDX59Q5T1V6 FANCA-209ENST00000562424 745 ntTSL 210.37□□□□□ -0.751e-10■■■□□ 15.8
DDX59Q5T1V6 FANCA-216ENST00000564870 460 ntTSL 39□□□□□ -0.971e-10■■■□□ 15.8
DDX59Q5T1V6 CSK-213ENST00000569462 534 ntTSL 417.07■□□□□ 0.324e-8■■■□□ 15.8
DDX59Q5T1V6 KPNB1-204ENST00000577875 605 ntTSL 33.98□□□□□ -1.771e-7■■■□□ 15.8
DDX59Q5T1V6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.92■□□□□ 0.782e-6■■■□□ 15.8
DDX59Q5T1V6 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC10.87□□□□□ -0.675e-7■■■□□ 15.8
DDX59Q5T1V6 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.259e-7■■■□□ 15.8
DDX59Q5T1V6 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.399e-7■■■□□ 15.8
DDX59Q5T1V6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.055e-7■■■□□ 15.8
DDX59Q5T1V6 EXT1-203ENST00000437196 1446 ntTSL 512.45□□□□□ -0.425e-7■■■□□ 15.8
DDX59Q5T1V6 TCF7L2-223ENST00000629706 1755 ntTSL 1 (best) BASIC11.52□□□□□ -0.578e-10■■■□□ 15.8
DDX59Q5T1V6 EXT1-202ENST00000436216 700 ntTSL 311.18□□□□□ -0.625e-7■■■□□ 15.8
DDX59Q5T1V6 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.888e-10■■■□□ 15.8
DDX59Q5T1V6 TCF7L2-205ENST00000355717 1979 ntTSL 1 (best) BASIC9.27□□□□□ -0.938e-10■■■□□ 15.8
DDX59Q5T1V6 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC8.76□□□□□ -1.018e-10■■■□□ 15.8
DDX59Q5T1V6 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC8.12□□□□□ -1.118e-10■■■□□ 15.8
DDX59Q5T1V6 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.5□□□□□ -1.218e-10■■■□□ 15.8
DDX59Q5T1V6 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.22□□□□□ -1.258e-10■■■□□ 15.8
Retrieved 100 of 7,289 protein–RNA pairs in 82.8 ms