RNA–Protein interactions for RNA: ENST00000564870.1

FANCA-216, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-216ENST00000564870 NISCHQ9Y2I1 1504 aa25.94■■□□□ 1.74
FANCA-216ENST00000564870 ABCC9O60706 1549 aa23.69■■□□□ 1.38
FANCA-216ENST00000564870 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
FANCA-216ENST00000564870 DNAJC5BQ9UF47 199 aa22.49■■□□□ 1.19
FANCA-216ENST00000564870 RB1CC1Q8TDY2 1594 aa22.36■■□□□ 1.17
FANCA-216ENST00000564870 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
FANCA-216ENST00000564870 NACADO15069 1562 aa22.14■■□□□ 1.13
FANCA-216ENST00000564870 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.122e-7■■■■□ 22.9
FANCA-216ENST00000564870 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
FANCA-216ENST00000564870 MYO15BQ96JP2 1530 aa21.73■■□□□ 1.07
FANCA-216ENST00000564870 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
FANCA-216ENST00000564870 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
FANCA-216ENST00000564870 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
FANCA-216ENST00000564870 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
FANCA-216ENST00000564870 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
FANCA-216ENST00000564870 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
FANCA-216ENST00000564870 SCRIBQ14160 1630 aa21.3■■□□□ 1
FANCA-216ENST00000564870 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
FANCA-216ENST00000564870 DNAJC5Q9H3Z4 198 aa20.81■□□□□ 0.92
FANCA-216ENST00000564870 NCAPD3P42695 1498 aa20.48■□□□□ 0.87
FANCA-216ENST00000564870 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
FANCA-216ENST00000564870 CUX2O14529 1486 aa20.46■□□□□ 0.87
FANCA-216ENST00000564870 ATAD2BQ9ULI0 1458 aa20.39■□□□□ 0.85
FANCA-216ENST00000564870 SMARCA2P51531 1590 aa20.29■□□□□ 0.84
FANCA-216ENST00000564870 NESP48681 1621 aa20.27■□□□□ 0.83
FANCA-216ENST00000564870 SMARCA4P51532 1647 aa20.27■□□□□ 0.83
FANCA-216ENST00000564870 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
FANCA-216ENST00000564870 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
FANCA-216ENST00000564870 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
FANCA-216ENST00000564870 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
FANCA-216ENST00000564870 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
FANCA-216ENST00000564870 MROH2BQ7Z745 1585 aa20.01■□□□□ 0.79
FANCA-216ENST00000564870 LAMC3Q9Y6N6 1575 aa20.01■□□□□ 0.79
FANCA-216ENST00000564870 PDS5BQ9NTI5 1447 aa19.97■□□□□ 0.79
FANCA-216ENST00000564870 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
FANCA-216ENST00000564870 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
FANCA-216ENST00000564870 TRIM41Q8WV44 630 aa19.85■□□□□ 0.77
FANCA-216ENST00000564870 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
FANCA-216ENST00000564870 WIZO95785 1651 aa19.73■□□□□ 0.75
FANCA-216ENST00000564870 WDR62O43379 1518 aa19.72■□□□□ 0.75
FANCA-216ENST00000564870 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
FANCA-216ENST00000564870 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.73
FANCA-216ENST00000564870 CFTRP13569 1480 aa19.57■□□□□ 0.72
FANCA-216ENST00000564870 OSCARQ8IYS5 282 aa19.57■□□□□ 0.72
FANCA-216ENST00000564870 RSF1Q96T23 1441 aaPredicted RBP19.52■□□□□ 0.72
FANCA-216ENST00000564870 URB2Q14146 1524 aaKnown RBP19.49■□□□□ 0.71
FANCA-216ENST00000564870 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
FANCA-216ENST00000564870 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
FANCA-216ENST00000564870 IFT140Q96RY7 1462 aa19.29■□□□□ 0.68
FANCA-216ENST00000564870 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
FANCA-216ENST00000564870 RIMBP3CA6NJZ7 1639 aa19.26■□□□□ 0.67
FANCA-216ENST00000564870 RIMBP3BA6NNM3 1639 aa19.26■□□□□ 0.67
FANCA-216ENST00000564870 RIMBP3Q9UFD9 1639 aa19.26■□□□□ 0.67
FANCA-216ENST00000564870 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
FANCA-216ENST00000564870 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
FANCA-216ENST00000564870 ARHGEF11O15085 1522 aa19.19■□□□□ 0.66
FANCA-216ENST00000564870 CYB5RLQ6IPT4 315 aa19.15■□□□□ 0.66
FANCA-216ENST00000564870 ABCC8Q09428 1581 aa19.15■□□□□ 0.66
FANCA-216ENST00000564870 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
FANCA-216ENST00000564870 AQRO60306 1485 aaKnown RBP eCLIP19.12■□□□□ 0.658e-7■■■■■ 28.7
FANCA-216ENST00000564870 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
FANCA-216ENST00000564870 FBLN2P98095 1184 aa19.1■□□□□ 0.65
FANCA-216ENST00000564870 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
FANCA-216ENST00000564870 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
FANCA-216ENST00000564870 POLA1P09884 1462 aaPredicted RBP19.02■□□□□ 0.63
FANCA-216ENST00000564870 CHD1O14646 1710 aa19.01■□□□□ 0.63
FANCA-216ENST00000564870 ARAP1Q96P48 1450 aa19■□□□□ 0.63
FANCA-216ENST00000564870 RAD54L2Q9Y4B4 1467 aa18.99■□□□□ 0.63
FANCA-216ENST00000564870 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
FANCA-216ENST00000564870 SOGA1O94964 1423 aa18.96■□□□□ 0.63
FANCA-216ENST00000564870 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
FANCA-216ENST00000564870 SNAPC4Q5SXM2 1469 aa18.89■□□□□ 0.61
FANCA-216ENST00000564870 FGD5Q6ZNL6 1462 aa18.87■□□□□ 0.61
FANCA-216ENST00000564870 CLASP1Q7Z460 1538 aa18.81■□□□□ 0.6
FANCA-216ENST00000564870 CUX1P39880 1505 aa18.8■□□□□ 0.6
FANCA-216ENST00000564870 MAGI1Q96QZ7 1491 aaPredicted RBP18.8■□□□□ 0.6
FANCA-216ENST00000564870 GRIN2BQ13224 1484 aa18.79■□□□□ 0.6
FANCA-216ENST00000564870 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
FANCA-216ENST00000564870 SYNJ1O43426 1573 aa18.78■□□□□ 0.6
FANCA-216ENST00000564870 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
FANCA-216ENST00000564870 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
FANCA-216ENST00000564870 AEBP2Q6ZN18 517 aaPredicted RBP18.66■□□□□ 0.58
FANCA-216ENST00000564870 ABCA10Q8WWZ4 1543 aa18.63■□□□□ 0.57
FANCA-216ENST00000564870 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
FANCA-216ENST00000564870 ABCA5Q8WWZ7 1642 aa18.58■□□□□ 0.56
FANCA-216ENST00000564870 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
FANCA-216ENST00000564870 GRIN2AQ12879 1464 aa18.54■□□□□ 0.56
FANCA-216ENST00000564870 WRNQ14191 1432 aaPredicted RBP eCLIP18.54■□□□□ 0.56
FANCA-216ENST00000564870 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
FANCA-216ENST00000564870 NUP160Q12769 1436 aa18.49■□□□□ 0.55
FANCA-216ENST00000564870 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
FANCA-216ENST00000564870 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
FANCA-216ENST00000564870 FHAD1B1AJZ9 1412 aa18.46■□□□□ 0.55
FANCA-216ENST00000564870 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
FANCA-216ENST00000564870 SHROOM2Q13796 1616 aa18.39■□□□□ 0.53
FANCA-216ENST00000564870 PRG4Q92954 1404 aaPredicted RBP18.38■□□□□ 0.53
FANCA-216ENST00000564870 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
FANCA-216ENST00000564870 JPH4Q96JJ6 628 aa18.37■□□□□ 0.53
FANCA-216ENST00000564870 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
FANCA-216ENST00000564870 FAM69CQ0P6D2 419 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms