RNA–Protein interactions for RNA: ENST00000635257.1

GPATCH8-211, Transcript of G-patch domain containing 8, humanhuman

TSL 5

Gene GPATCH8, Length 5,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-211ENST00000635257 DCAF8L2P0C7V8 631 aa19.42■□□□□ 0.7
GPATCH8-211ENST00000635257 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
GPATCH8-211ENST00000635257 SUPT5HO00267 1087 aaKnown RBP18.52■□□□□ 0.56
GPATCH8-211ENST00000635257 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
GPATCH8-211ENST00000635257 APLP2Q06481 763 aa17.99■□□□□ 0.47
GPATCH8-211ENST00000635257 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
GPATCH8-211ENST00000635257 ERICH6Q7L0X2 663 aa17.78■□□□□ 0.44
GPATCH8-211ENST00000635257 CCER1Q8TC90 406 aaPredicted RBP17.73■□□□□ 0.43
GPATCH8-211ENST00000635257 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
GPATCH8-211ENST00000635257 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
GPATCH8-211ENST00000635257 NISCHQ9Y2I1 1504 aa17.58■□□□□ 0.41
GPATCH8-211ENST00000635257 PCGF6Q9BYE7 350 aa17.55■□□□□ 0.4
GPATCH8-211ENST00000635257 TTBK1Q5TCY1 1321 aaPredicted RBP17.51■□□□□ 0.39
GPATCH8-211ENST00000635257 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
GPATCH8-211ENST00000635257 MYT1Q01538 1121 aa17.4■□□□□ 0.38
GPATCH8-211ENST00000635257 NEFLP07196 543 aa17.34■□□□□ 0.37
GPATCH8-211ENST00000635257 RANGAP1P46060 587 aaPredicted RBP17.25■□□□□ 0.35
GPATCH8-211ENST00000635257 ATP1B4Q9UN42 357 aaPredicted RBP17.2■□□□□ 0.34
GPATCH8-211ENST00000635257 TRIM41Q8WV44 630 aa17.16■□□□□ 0.34
GPATCH8-211ENST00000635257 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
GPATCH8-211ENST00000635257 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
GPATCH8-211ENST00000635257 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
GPATCH8-211ENST00000635257 TRIM26Q12899 539 aaPredicted RBP16.75■□□□□ 0.27
GPATCH8-211ENST00000635257 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
GPATCH8-211ENST00000635257 POLR3GLQ9BT43 218 aa16.68■□□□□ 0.26
GPATCH8-211ENST00000635257 HRCP23327 699 aa16.65■□□□□ 0.26
GPATCH8-211ENST00000635257 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
GPATCH8-211ENST00000635257 ITGAEP38570 1179 aa16.58■□□□□ 0.25
GPATCH8-211ENST00000635257 RTL5Q5HYW3 569 aaPredicted RBP16.56■□□□□ 0.24
GPATCH8-211ENST00000635257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.53■□□□□ 0.24
GPATCH8-211ENST00000635257 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
GPATCH8-211ENST00000635257 ZNF316A6NFI3 1004 aaPredicted RBP16.53■□□□□ 0.24
GPATCH8-211ENST00000635257 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
GPATCH8-211ENST00000635257 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
GPATCH8-211ENST00000635257 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
GPATCH8-211ENST00000635257 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
GPATCH8-211ENST00000635257 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
GPATCH8-211ENST00000635257 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
GPATCH8-211ENST00000635257 ZBTB47Q9UFB7 747 aaPredicted RBP16.15■□□□□ 0.18
GPATCH8-211ENST00000635257 CDK11AQ9UQ88 783 aaPredicted RBP16.14■□□□□ 0.17
GPATCH8-211ENST00000635257 FAM50AQ14320 339 aaKnown RBP16.12■□□□□ 0.17
GPATCH8-211ENST00000635257 TRIM52Q96A61 297 aa16.11■□□□□ 0.17
GPATCH8-211ENST00000635257 BCANQ96GW7 911 aa16.1■□□□□ 0.17
GPATCH8-211ENST00000635257 ANP32CO43423 234 aa16.08■□□□□ 0.16
GPATCH8-211ENST00000635257 NEUROD1Q13562 356 aa16.05■□□□□ 0.16
GPATCH8-211ENST00000635257 GTF3C3Q9Y5Q9 886 aa16.05■□□□□ 0.16
GPATCH8-211ENST00000635257 CANXP27824 592 aaKnown RBP15.97■□□□□ 0.15
GPATCH8-211ENST00000635257 ZNF326Q5BKZ1 582 aaKnown RBP15.94■□□□□ 0.14
GPATCH8-211ENST00000635257 ANP32AP39687 249 aaKnown RBP15.91■□□□□ 0.14
GPATCH8-211ENST00000635257 NEFMP07197 916 aa15.89■□□□□ 0.13
GPATCH8-211ENST00000635257 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
GPATCH8-211ENST00000635257 BCL11AQ9H165 835 aa15.86■□□□□ 0.13
GPATCH8-211ENST00000635257 ANP32BQ92688 251 aaKnown RBP15.8■□□□□ 0.12
GPATCH8-211ENST00000635257 ACIN1Q9UKV3 1341 aaKnown RBP15.77■□□□□ 0.11
GPATCH8-211ENST00000635257 NPM2Q86SE8 214 aaKnown RBP15.76■□□□□ 0.11
GPATCH8-211ENST00000635257 EIF5BO60841 1220 aaKnown RBP15.74■□□□□ 0.11
GPATCH8-211ENST00000635257 HSP90AA1P07900 732 aaKnown RBP15.69■□□□□ 0.1
GPATCH8-211ENST00000635257 GLIPR1L2Q4G1C9 344 aa15.66■□□□□ 0.1
GPATCH8-211ENST00000635257 UPF2Q9HAU5 1272 aaKnown RBP15.66■□□□□ 0.1
GPATCH8-211ENST00000635257 FKBP8Q14318 412 aa15.61■□□□□ 0.09
GPATCH8-211ENST00000635257 FBLN2P98095 1184 aa15.6■□□□□ 0.09
GPATCH8-211ENST00000635257 HNRNPUQ00839 825 aaKnown RBP eCLIP15.51■□□□□ 0.07
GPATCH8-211ENST00000635257 ZNF777Q9ULD5 760 aaPredicted RBP15.51■□□□□ 0.07
GPATCH8-211ENST00000635257 P3H3Q8IVL6 736 aa15.5■□□□□ 0.07
GPATCH8-211ENST00000635257 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
GPATCH8-211ENST00000635257 TONSLQ96HA7 1378 aa15.48■□□□□ 0.07
GPATCH8-211ENST00000635257 ARID3CA6NKF2 412 aa15.48■□□□□ 0.07
GPATCH8-211ENST00000635257 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.47■□□□□ 0.07
GPATCH8-211ENST00000635257 FAM9BQ8IZU0 186 aa15.46■□□□□ 0.07
GPATCH8-211ENST00000635257 CCDC136Q96JN2 1154 aa15.45■□□□□ 0.06
GPATCH8-211ENST00000635257 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
GPATCH8-211ENST00000635257 ESF1Q9H501 851 aaKnown RBP15.44■□□□□ 0.06
GPATCH8-211ENST00000635257 NBR1Q14596 966 aa15.42■□□□□ 0.06
GPATCH8-211ENST00000635257 CHGAP10645 457 aaKnown RBP15.4■□□□□ 0.06
GPATCH8-211ENST00000635257 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
GPATCH8-211ENST00000635257 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
GPATCH8-211ENST00000635257 TMC1Q8TDI8 760 aa15.39■□□□□ 0.05
GPATCH8-211ENST00000635257 SALL2Q9Y467 1007 aaPredicted RBP15.39■□□□□ 0.05
GPATCH8-211ENST00000635257 ARXQ96QS3 562 aa15.36■□□□□ 0.05
GPATCH8-211ENST00000635257 WDR43Q15061 677 aaKnown RBP eCLIP15.35■□□□□ 0.05
GPATCH8-211ENST00000635257 CDK11BP21127 795 aaKnown RBP15.33■□□□□ 0.04
GPATCH8-211ENST00000635257 MYH16Q9H6N6 1097 aa15.3■□□□□ 0.04
GPATCH8-211ENST00000635257 MRS2Q9HD23 443 aa15.28■□□□□ 0.04
GPATCH8-211ENST00000635257 ANP32EQ9BTT0 268 aa15.27■□□□□ 0.03
GPATCH8-211ENST00000635257 ABCC9O60706 1549 aa15.26■□□□□ 0.03
GPATCH8-211ENST00000635257 DDRGK1Q96HY6 314 aa15.25■□□□□ 0.03
GPATCH8-211ENST00000635257 BECN1Q14457 450 aa15.25■□□□□ 0.03
GPATCH8-211ENST00000635257 NCLP19338 710 aaKnown RBP15.25■□□□□ 0.03
GPATCH8-211ENST00000635257 TRIM44Q96DX7 344 aaPredicted RBP15.24■□□□□ 0.03
GPATCH8-211ENST00000635257 GOLGA6L22H0YM25 854 aa15.2■□□□□ 0.02
GPATCH8-211ENST00000635257 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
GPATCH8-211ENST00000635257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■■■□□ 14.8
GPATCH8-211ENST00000635257 CHIC2Q9UKJ5 165 aa15.17■□□□□ 0.02
GPATCH8-211ENST00000635257 TNNT2P45379 298 aaPredicted RBP15.17■□□□□ 0.02
GPATCH8-211ENST00000635257 IRX6P78412 446 aaPredicted RBP15.17■□□□□ 0.02
GPATCH8-211ENST00000635257 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
GPATCH8-211ENST00000635257 KDM2AQ9Y2K7 1162 aa15.16■□□□□ 0.02
GPATCH8-211ENST00000635257 TSPY4P0CV99 314 aa15.14■□□□□ 0.01
GPATCH8-211ENST00000635257 TSPY10P0CW01 314 aa15.14■□□□□ 0.01
GPATCH8-211ENST00000635257 MIER1Q8N108 512 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms