RNA–Protein interactions for RNA: ENST00000443023.5

SATB2-205, Transcript of SATB homeobox 2, humanhuman

TSL 5 BASIC

Gene SATB2, Length 6,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-205ENST00000443023 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
SATB2-205ENST00000443023 EHMT2Q96KQ7 1210 aa24.58■■□□□ 1.52
SATB2-205ENST00000443023 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
SATB2-205ENST00000443023 PELP1Q8IZL8 1130 aaKnown RBP24.3■■□□□ 1.48
SATB2-205ENST00000443023 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
SATB2-205ENST00000443023 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
SATB2-205ENST00000443023 ERICH6Q7L0X2 663 aa23.69■■□□□ 1.38
SATB2-205ENST00000443023 PCGF6Q9BYE7 350 aa23.58■■□□□ 1.37
SATB2-205ENST00000443023 MYT1Q01538 1121 aa23.58■■□□□ 1.36
SATB2-205ENST00000443023 APLP2Q06481 763 aa23.52■■□□□ 1.36
SATB2-205ENST00000443023 CENPBP07199 599 aaPredicted RBP23.42■■□□□ 1.34
SATB2-205ENST00000443023 FAM9AQ8IZU1 332 aaPredicted RBP23.36■■□□□ 1.33
SATB2-205ENST00000443023 RANGAP1P46060 587 aaPredicted RBP23.27■■□□□ 1.32
SATB2-205ENST00000443023 YTHDC1Q96MU7 727 aaKnown RBP23.18■■□□□ 1.3
SATB2-205ENST00000443023 CCER1Q8TC90 406 aaPredicted RBP23.16■■□□□ 1.3
SATB2-205ENST00000443023 ATP1B4Q9UN42 357 aaPredicted RBP22.99■■□□□ 1.27
SATB2-205ENST00000443023 ZEB1P37275 1124 aaPredicted RBP22.88■■□□□ 1.25
SATB2-205ENST00000443023 NEFLP07196 543 aa22.74■■□□□ 1.23
SATB2-205ENST00000443023 PPARGC1BQ86YN6 1023 aaKnown RBP22.49■■□□□ 1.19
SATB2-205ENST00000443023 HRCP23327 699 aa22.46■■□□□ 1.19
SATB2-205ENST00000443023 CNGB1Q14028 1251 aaPredicted RBP22.39■■□□□ 1.18
SATB2-205ENST00000443023 POLR3GLQ9BT43 218 aa22.39■■□□□ 1.17
SATB2-205ENST00000443023 UBTFP17480 764 aaKnown RBP22.38■■□□□ 1.17
SATB2-205ENST00000443023 DAXXQ9UER7 740 aaPredicted RBP22.37■■□□□ 1.17
SATB2-205ENST00000443023 TRIM41Q8WV44 630 aa22.33■■□□□ 1.16
SATB2-205ENST00000443023 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
SATB2-205ENST00000443023 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
SATB2-205ENST00000443023 NISCHQ9Y2I1 1504 aa22.13■■□□□ 1.13
SATB2-205ENST00000443023 ITGAEP38570 1179 aa22.13■■□□□ 1.13
SATB2-205ENST00000443023 TRIM26Q12899 539 aaPredicted RBP22.09■■□□□ 1.13
SATB2-205ENST00000443023 RTL5Q5HYW3 569 aaPredicted RBP22.02■■□□□ 1.12
SATB2-205ENST00000443023 SLC4A1APQ9BWU0 796 aaKnown RBP21.99■■□□□ 1.11
SATB2-205ENST00000443023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.95■■□□□ 1.1
SATB2-205ENST00000443023 HNRNPUL2Q1KMD3 747 aaKnown RBP21.95■■□□□ 1.1
SATB2-205ENST00000443023 GTF3C3Q9Y5Q9 886 aa21.94■■□□□ 1.1
SATB2-205ENST00000443023 BCANQ96GW7 911 aa21.86■■□□□ 1.09
SATB2-205ENST00000443023 ZNF316A6NFI3 1004 aaPredicted RBP21.84■■□□□ 1.09
SATB2-205ENST00000443023 CLSPNQ9HAW4 1339 aa21.84■■□□□ 1.09
SATB2-205ENST00000443023 DIEXFQ68CQ4 756 aaKnown RBP21.81■■□□□ 1.08
SATB2-205ENST00000443023 LOC105371045A0A1W2PR82 267 aa21.68■■□□□ 1.06
SATB2-205ENST00000443023 BCL11AQ9H165 835 aa21.63■■□□□ 1.05
SATB2-205ENST00000443023 EIF5BO60841 1220 aaKnown RBP21.53■■□□□ 1.04
SATB2-205ENST00000443023 ACIN1Q9UKV3 1341 aaKnown RBP21.4■■□□□ 1.02
SATB2-205ENST00000443023 CDK11AQ9UQ88 783 aaPredicted RBP21.4■■□□□ 1.02
SATB2-205ENST00000443023 SLC24A1O60721 1099 aa21.39■■□□□ 1.01
SATB2-205ENST00000443023 NEUROD1Q13562 356 aa21.28■■□□□ 1
SATB2-205ENST00000443023 ZNF326Q5BKZ1 582 aaKnown RBP21.25■□□□□ 0.99
SATB2-205ENST00000443023 FAM50AQ14320 339 aaKnown RBP21.25■□□□□ 0.99
SATB2-205ENST00000443023 TRIM52Q96A61 297 aa21.24■□□□□ 0.99
SATB2-205ENST00000443023 ZBTB47Q9UFB7 747 aaPredicted RBP21.22■□□□□ 0.99
SATB2-205ENST00000443023 NPM2Q86SE8 214 aaKnown RBP21.15■□□□□ 0.98
SATB2-205ENST00000443023 CANXP27824 592 aaKnown RBP21.11■□□□□ 0.97
SATB2-205ENST00000443023 ANP32AP39687 249 aaKnown RBP21.06■□□□□ 0.96
SATB2-205ENST00000443023 NBR1Q14596 966 aa21.05■□□□□ 0.96
SATB2-205ENST00000443023 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
SATB2-205ENST00000443023 GLIPR1L2Q4G1C9 344 aa21.02■□□□□ 0.96
SATB2-205ENST00000443023 ANP32CO43423 234 aa20.98■□□□□ 0.95
SATB2-205ENST00000443023 FKBP8Q14318 412 aa20.96■□□□□ 0.95
SATB2-205ENST00000443023 ARXQ96QS3 562 aa20.84■□□□□ 0.93
SATB2-205ENST00000443023 ARID3CA6NKF2 412 aa20.8■□□□□ 0.92
SATB2-205ENST00000443023 NEFMP07197 916 aa20.77■□□□□ 0.92
SATB2-205ENST00000443023 PLPPR3Q6T4P5 718 aa20.74■□□□□ 0.91
SATB2-205ENST00000443023 FBLN2P98095 1184 aa20.73■□□□□ 0.91
SATB2-205ENST00000443023 HSP90AA1P07900 732 aaKnown RBP20.71■□□□□ 0.91
SATB2-205ENST00000443023 ANP32BQ92688 251 aaKnown RBP20.67■□□□□ 0.9
SATB2-205ENST00000443023 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
SATB2-205ENST00000443023 RTN4Q9NQC3 1192 aaKnown RBP20.61■□□□□ 0.89
SATB2-205ENST00000443023 ANP32EQ9BTT0 268 aa20.61■□□□□ 0.89
SATB2-205ENST00000443023 P3H3Q8IVL6 736 aa20.56■□□□□ 0.88
SATB2-205ENST00000443023 IRX6P78412 446 aaPredicted RBP20.54■□□□□ 0.88
SATB2-205ENST00000443023 ZNF777Q9ULD5 760 aaPredicted RBP20.53■□□□□ 0.88
SATB2-205ENST00000443023 HNRNPUQ00839 825 aaKnown RBP eCLIP20.48■□□□□ 0.87
SATB2-205ENST00000443023 CHGAP10645 457 aaKnown RBP20.47■□□□□ 0.87
SATB2-205ENST00000443023 FAM9BQ8IZU0 186 aa20.43■□□□□ 0.86
SATB2-205ENST00000443023 UPF2Q9HAU5 1272 aaKnown RBP20.4■□□□□ 0.86
SATB2-205ENST00000443023 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.86
SATB2-205ENST00000443023 A0A0G2JS52 829 aa20.39■□□□□ 0.85
SATB2-205ENST00000443023 CCDC136Q96JN2 1154 aa20.38■□□□□ 0.85
SATB2-205ENST00000443023 PLEKHG5O94827 1062 aa20.38■□□□□ 0.85
SATB2-205ENST00000443023 MIER1Q8N108 512 aa20.37■□□□□ 0.85
SATB2-205ENST00000443023 DDX10Q13206 875 aaKnown RBP20.36■□□□□ 0.85
SATB2-205ENST00000443023 STAG3Q9UJ98 1225 aa20.35■□□□□ 0.85
SATB2-205ENST00000443023 SENP3Q9H4L4 574 aaPredicted RBP20.34■□□□□ 0.85
SATB2-205ENST00000443023 ESF1Q9H501 851 aaKnown RBP20.3■□□□□ 0.84
SATB2-205ENST00000443023 CDK11BP21127 795 aaKnown RBP20.26■□□□□ 0.83
SATB2-205ENST00000443023 TPRNQ4KMQ1 711 aa20.26■□□□□ 0.83
SATB2-205ENST00000443023 NAP1L5Q96NT1 182 aaPredicted RBP20.26■□□□□ 0.83
SATB2-205ENST00000443023 TULP1O00294 542 aaPredicted RBP20.24■□□□□ 0.83
SATB2-205ENST00000443023 ZBTB7CA1YPR0 619 aa20.23■□□□□ 0.83
SATB2-205ENST00000443023 AMER1Q5JTC6 1135 aaPredicted RBP20.21■□□□□ 0.83
SATB2-205ENST00000443023 TRIM44Q96DX7 344 aaPredicted RBP20.2■□□□□ 0.82
SATB2-205ENST00000443023 LAS1LQ9Y4W2 734 aaKnown RBP20.17■□□□□ 0.82
SATB2-205ENST00000443023 SENP3-EIF4A1A0A087X0R7 540 aa20.16■□□□□ 0.82
SATB2-205ENST00000443023 TNNT2P45379 298 aaPredicted RBP20.16■□□□□ 0.82
SATB2-205ENST00000443023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.81
SATB2-205ENST00000443023 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.13■□□□□ 0.81
SATB2-205ENST00000443023 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.13■□□□□ 0.81
SATB2-205ENST00000443023 TMC1Q8TDI8 760 aa20.1■□□□□ 0.81
SATB2-205ENST00000443023 DEKP35659 375 aaKnown RBP20.09■□□□□ 0.81
SATB2-205ENST00000443023 TONSLQ96HA7 1378 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms