RNA–Protein interactions for RNA: ENST00000457245.5

SATB2-206, Transcript of SATB homeobox 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SATB2, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-206ENST00000457245 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
SATB2-206ENST00000457245 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
SATB2-206ENST00000457245 SUPT5HO00267 1087 aaKnown RBP28.06■■■□□ 2.08
SATB2-206ENST00000457245 DCAF8L2P0C7V8 631 aa27.64■■■□□ 2.02
SATB2-206ENST00000457245 CCDC180Q9P1Z9 1646 aa27.63■■■□□ 2.01
SATB2-206ENST00000457245 ZCCHC6Q5VYS8 1495 aaKnown RBP27.39■■□□□ 1.98
SATB2-206ENST00000457245 MYO15BQ96JP2 1530 aa27.18■■□□□ 1.94
SATB2-206ENST00000457245 CHIC1Q5VXU3 224 aa27.1■■□□□ 1.93
SATB2-206ENST00000457245 PCGF6Q9BYE7 350 aa26.71■■□□□ 1.87
SATB2-206ENST00000457245 LOC105371045A0A1W2PR82 267 aa26.66■■□□□ 1.86
SATB2-206ENST00000457245 HRCP23327 699 aa26.53■■□□□ 1.84
SATB2-206ENST00000457245 PPARGC1BQ86YN6 1023 aaKnown RBP26.5■■□□□ 1.83
SATB2-206ENST00000457245 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
SATB2-206ENST00000457245 EHMT2Q96KQ7 1210 aa26.17■■□□□ 1.78
SATB2-206ENST00000457245 ABCC9O60706 1549 aa26.15■■□□□ 1.78
SATB2-206ENST00000457245 FAM9AQ8IZU1 332 aaPredicted RBP26.06■■□□□ 1.76
SATB2-206ENST00000457245 SCRIBQ14160 1630 aa26.03■■□□□ 1.76
SATB2-206ENST00000457245 RSF1Q96T23 1441 aaPredicted RBP25.9■■□□□ 1.74
SATB2-206ENST00000457245 TRIM41Q8WV44 630 aa25.82■■□□□ 1.72
SATB2-206ENST00000457245 TRIM26Q12899 539 aaPredicted RBP25.74■■□□□ 1.71
SATB2-206ENST00000457245 RB1CC1Q8TDY2 1594 aa25.74■■□□□ 1.71
SATB2-206ENST00000457245 NACADO15069 1562 aa25.7■■□□□ 1.7
SATB2-206ENST00000457245 CECR2Q9BXF3 1484 aa25.64■■□□□ 1.7
SATB2-206ENST00000457245 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
SATB2-206ENST00000457245 WIZO95785 1651 aa25.32■■□□□ 1.64
SATB2-206ENST00000457245 TTBK1Q5TCY1 1321 aaPredicted RBP25.29■■□□□ 1.64
SATB2-206ENST00000457245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.11■■□□□ 1.61
SATB2-206ENST00000457245 UNC13AQ9UPW8 1703 aa25■■□□□ 1.59
SATB2-206ENST00000457245 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
SATB2-206ENST00000457245 ZEB1P37275 1124 aaPredicted RBP24.96■■□□□ 1.59
SATB2-206ENST00000457245 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.58
SATB2-206ENST00000457245 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
SATB2-206ENST00000457245 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
SATB2-206ENST00000457245 CCER1Q8TC90 406 aaPredicted RBP24.83■■□□□ 1.57
SATB2-206ENST00000457245 SCAF1Q9H7N4 1312 aaKnown RBP24.81■■□□□ 1.56
SATB2-206ENST00000457245 SOGA1O94964 1423 aa24.8■■□□□ 1.56
SATB2-206ENST00000457245 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
SATB2-206ENST00000457245 RUSC2Q8N2Y8 1516 aa24.76■■□□□ 1.55
SATB2-206ENST00000457245 BICRAQ9NZM4 1560 aa24.69■■□□□ 1.54
SATB2-206ENST00000457245 UBTFP17480 764 aaKnown RBP24.66■■□□□ 1.54
SATB2-206ENST00000457245 SMARCA2P51531 1590 aa24.62■■□□□ 1.53
SATB2-206ENST00000457245 SMARCA4P51532 1647 aa24.62■■□□□ 1.53
SATB2-206ENST00000457245 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
SATB2-206ENST00000457245 CEP162Q5TB80 1403 aa24.59■■□□□ 1.53
SATB2-206ENST00000457245 RANGAP1P46060 587 aaPredicted RBP24.58■■□□□ 1.53
SATB2-206ENST00000457245 CSRNP3Q8WYN3 585 aa24.53■■□□□ 1.52
SATB2-206ENST00000457245 NEUROD1Q13562 356 aa24.47■■□□□ 1.51
SATB2-206ENST00000457245 DIEXFQ68CQ4 756 aaKnown RBP24.41■■□□□ 1.5
SATB2-206ENST00000457245 HNRNPUL2Q1KMD3 747 aaKnown RBP24.4■■□□□ 1.5
SATB2-206ENST00000457245 TNIKQ9UKE5 1360 aa24.37■■□□□ 1.49
SATB2-206ENST00000457245 WRNQ14191 1432 aaPredicted RBP eCLIP24.33■■□□□ 1.49
SATB2-206ENST00000457245 ACIN1Q9UKV3 1341 aaKnown RBP24.28■■□□□ 1.48
SATB2-206ENST00000457245 SYNJ1O43426 1573 aa24.21■■□□□ 1.47
SATB2-206ENST00000457245 YTHDC1Q96MU7 727 aaKnown RBP24.21■■□□□ 1.47
SATB2-206ENST00000457245 GTF3C3Q9Y5Q9 886 aa24.2■■□□□ 1.46
SATB2-206ENST00000457245 GOLGA3Q08378 1498 aa24.18■■□□□ 1.46
SATB2-206ENST00000457245 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
SATB2-206ENST00000457245 ATAD2BQ9ULI0 1458 aa24.12■■□□□ 1.45
SATB2-206ENST00000457245 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
SATB2-206ENST00000457245 CLIP1P30622 1438 aa24.07■■□□□ 1.44
SATB2-206ENST00000457245 EEA1Q15075 1411 aa24.07■■□□□ 1.44
SATB2-206ENST00000457245 ZNF316A6NFI3 1004 aaPredicted RBP24.07■■□□□ 1.44
SATB2-206ENST00000457245 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
SATB2-206ENST00000457245 MIER1Q8N108 512 aa24.01■■□□□ 1.43
SATB2-206ENST00000457245 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
SATB2-206ENST00000457245 APLP2Q06481 763 aa23.92■■□□□ 1.42
SATB2-206ENST00000457245 CENPBP07199 599 aaPredicted RBP23.9■■□□□ 1.42
SATB2-206ENST00000457245 KANK4Q5T7N3 995 aaPredicted RBP23.89■■□□□ 1.42
SATB2-206ENST00000457245 VPS8Q8N3P4 1428 aa23.88■■□□□ 1.41
SATB2-206ENST00000457245 KIF21BO75037 1637 aa23.84■■□□□ 1.41
SATB2-206ENST00000457245 PELP1Q8IZL8 1130 aaKnown RBP23.82■■□□□ 1.4
SATB2-206ENST00000457245 ITGAEP38570 1179 aa23.78■■□□□ 1.4
SATB2-206ENST00000457245 NCAPD3P42695 1498 aa23.76■■□□□ 1.39
SATB2-206ENST00000457245 HMGXB3Q12766 1538 aa23.7■■□□□ 1.38
SATB2-206ENST00000457245 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
SATB2-206ENST00000457245 ARAP1Q96P48 1450 aa23.65■■□□□ 1.38
SATB2-206ENST00000457245 DHX57Q6P158 1386 aaKnown RBP23.6■■□□□ 1.37
SATB2-206ENST00000457245 CUX1P39880 1505 aa23.6■■□□□ 1.37
SATB2-206ENST00000457245 PRXQ9BXM0 1461 aa23.58■■□□□ 1.37
SATB2-206ENST00000457245 CC2D2AQ9P2K1 1620 aa23.53■■□□□ 1.36
SATB2-206ENST00000457245 P3H3Q8IVL6 736 aa23.51■■□□□ 1.35
SATB2-206ENST00000457245 BIVM-ERCC5R4GMW8 1640 aa23.49■■□□□ 1.35
SATB2-206ENST00000457245 KCNH8Q96L42 1107 aa23.46■■□□□ 1.35
SATB2-206ENST00000457245 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
SATB2-206ENST00000457245 ATP1B4Q9UN42 357 aaPredicted RBP23.43■■□□□ 1.34
SATB2-206ENST00000457245 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
SATB2-206ENST00000457245 CFTRP13569 1480 aa23.39■■□□□ 1.34
SATB2-206ENST00000457245 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
SATB2-206ENST00000457245 CUX2O14529 1486 aa23.34■■□□□ 1.33
SATB2-206ENST00000457245 CCNB3Q8WWL7 1395 aa23.34■■□□□ 1.33
SATB2-206ENST00000457245 HIRIP3Q9BW71 556 aaPredicted RBP23.34■■□□□ 1.33
SATB2-206ENST00000457245 SIN3AQ96ST3 1273 aa23.33■■□□□ 1.32
SATB2-206ENST00000457245 IGF1RP08069 1367 aa23.31■■□□□ 1.32
SATB2-206ENST00000457245 RRBP1Q9P2E9 1410 aaKnown RBP23.3■■□□□ 1.32
SATB2-206ENST00000457245 FAM50AQ14320 339 aaKnown RBP23.29■■□□□ 1.32
SATB2-206ENST00000457245 CADPSQ9ULU8 1353 aa23.29■■□□□ 1.32
SATB2-206ENST00000457245 RAB3GAP2Q9H2M9 1393 aa23.27■■□□□ 1.32
SATB2-206ENST00000457245 PHLDB1Q86UU1 1377 aa23.21■■□□□ 1.31
SATB2-206ENST00000457245 PRDM2Q13029 1718 aa23.2■■□□□ 1.3
SATB2-206ENST00000457245 CARMIL1Q5VZK9 1371 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms